ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY112425.1| Zea mays CL3126_1 mRNA sequence 347 3e-92
2ref|NM_192597.1| Oryza sativa (japonica cultivar-group), predic... 343 5e-91
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
4dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic D... 143 9e-31
5gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete s... 80 1e-11
6ref|NM_128132.1| Arabidopsis thaliana unknown protein AT2G25730 ... 62 3e-06
7gb|BT001077.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, com... 62 3e-06
8gb|AY048285.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, com... 62 3e-06
9gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map... 60 1e-05
10emb|BX819218.1|CNS0AADV Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
11gb|AE004210.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 44 0.62
12gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, compl... 44 0.62
13gb|AC142314.1| Pan troglodytes BAC clone RP43-48H9 from 7, compl... 42 2.4
14gb|AF453997.1| Tetrahymena thermophila protein tyrosine kinase 1... 42 2.4
15gb|AC020581.10| Homo sapiens chromosome 7 clone RP11-88K4, compl... 42 2.4
16emb|AL031582.1|DMC118B3 Drosophila melanogaster cosmid clone 118B3 42 2.4
17gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell ... 42 2.4
18emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 i... 42 2.4
19gb|AC009329.20|AC009329 Human Chromosome 7 clone RP11-264E12, co... 42 2.4
20gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o... 42 2.4
21gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, com... 40 9.7
22gb|AC110256.12| Mus musculus chromosome 6, clone RP23-274K3, com... 40 9.7
23gb|AC127566.3| Mus musculus BAC clone RP24-187F3 from chromosome... 40 9.7
24gb|AC131764.3| Mus musculus BAC clone RP24-239L16 from chromosom... 40 9.7
25emb|Z69302.1|CEF40F8 Caenorhabditis elegans Cosmid F40F8, comple... 40 9.7
26gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome... 40 9.7
27gb|AY898647.1| Plasmodium falciparum tryptophan-rich antigen 3 g... 40 9.7
28gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1... 40 9.7
29emb|AL031672.13|HS691N24 Human DNA sequence from clone RP4-691N2... 40 9.7
30emb|AL022238.1|HS1042K10 Human DNA sequence from clone RP5-1042K... 40 9.7
31gb|AC079600.19| Homo sapiens 12 BAC RP11-609L23 (Roswell Park Ca... 40 9.7
32gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome... 40 9.7
33gb|BC091665.1| Danio rerio im:7138823, mRNA (cDNA clone IMAGE:71... 40 9.7
34gb|AC093584.3| Homo sapiens BAC clone RP13-531E5 from 4, complet... 40 9.7
35gb|AC139147.2| Homo sapiens chromosome 15, clone RP11-107D24, co... 40 9.7
36gb|AC100720.8| Homo sapiens chromosome 15, clone CTD-2317M11, co... 40 9.7
37emb|BX957256.6| Zebrafish DNA sequence from clone DKEY-23N7 in l... 40 9.7
38gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, comp... 40 9.7
39dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 9.7
40emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chr... 40 9.7 
>gb|AY112425.1| Zea mays CL3126_1 mRNA sequence
          Length = 1056

 Score =  347 bits (175), Expect = 3e-92
 Identities = 248/274 (90%)
 Strand = Plus / Plus

                                                                       
Query: 431 acatgtactgggccagccattgcttgcacatatcaagaaccggcaatgcatttgcatgta 490
           |||||||||| || ||||||||||| ||||||||||| || | |||||||||||||||||
Sbjct: 198 acatgtactgcgcgagccattgcttacacatatcaagcactgtcaatgcatttgcatgta 257

                                                                       
Query: 491 atgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggctatctgga 550
           |||||||||| |||||||||||||||||||| || ||||||||||||| |||||| ||||
Sbjct: 258 atgcctgatgagcaacatattgaacatcagcgacacttccacttcgtgcggctatttgga 317

                                                                       
Query: 551 atgcactttttagacggccgcaaacaacgcaagcaagtactttcctgtgattgctgatta 610
           ||||||     ||||| || || ||||| |||||||||||||||||||||||||||||||
Sbjct: 318 atgcacnnnnnagacgtccacagacaacacaagcaagtactttcctgtgattgctgatta 377

                                                                       
Query: 611 gcatgtcaataagtcgatctggcctttctttatgcttgttagcataaacatttatagcag 670
           ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 378 gcatgtcgataaggcgatctggtctttctttatgcttgttggcataaacatttatagcag 437

                                             
Query: 671 caccaagaacctgatcccattcatcatcttctat 704
           |||||| ||||||||||||||||||||| |||||
Sbjct: 438 caccaataacctgatcccattcatcatcatctat 471
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>ref|NM_192597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 7305

 Score =  343 bits (173), Expect = 5e-91
 Identities = 251/277 (90%)
 Strand = Plus / Minus

                                                                        
Query: 429  ttacatgtactgggccagccattgcttgcacatatcaagaaccggcaatgcatttgcatg 488
            |||||||||||| || | |||||||||||||||||||||||| || || |||||||||||
Sbjct: 7305 ttacatgtactgagctaaccattgcttgcacatatcaagaacgggtaacgcatttgcatg 7246

                                                                        
Query: 489  taatgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggctatctg 548
            |||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 7245 taatgcctgatgagcaacatattgaacatcagcaacacttccacttcgggaggctatctg 7186

                                                                        
Query: 549  gaatgcactttttagacggccgcaaacaacgcaagcaagtactttcctgtgattgctgat 608
            ||||||||||||||||||||| || ||||| || ||||||||||||||||| ||||||| 
Sbjct: 7185 gaatgcactttttagacggccacacacaacacaggcaagtactttcctgtggttgctgag 7126

                                                                        
Query: 609  tagcatgtcaataagtcgatctggcctttctttatgcttgttagcataaacatttatagc 668
            || |||||| ||||| |||||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct: 7125 taacatgtcgataaggcgatctggtctttctttgtgcttattagcgtaaacatttatagc 7066

                                                 
Query: 669  agcaccaagaacctgatcccattcatcatcttctatg 705
            ||| || ||||||||||||||||||||||| ||||||
Sbjct: 7065 agcccccagaacctgatcccattcatcatcatctatg 7029
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 9e-31
 Identities = 96/104 (92%)
 Strand = Plus / Minus

                                                                            
Query: 494      cctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggctatctggaatg 553
                ||||||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 23208561 cctgatgagcaacatattgaacatcagcaacacttccacttcgggaggctatctggaatg 23208502

                                                            
Query: 554      cactttttagacggccgcaaacaacgcaagcaagtactttcctg 597
                |||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 23208501 cactttttagacggccacacacaacacaggcaagtactttcctg 23208458



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                            
Query: 427      aattacatgtactgggccagccattgcttgcacatatcaagaaccggcaatgcatttgca 486
                |||||||||||||| || | |||||||||||||||||||||||| || || |||||||||
Sbjct: 23209337 aattacatgtactgagctaaccattgcttgcacatatcaagaacgggtaacgcatttgca 23209278

                          
Query: 487      tgtaatgcct 496
                ||||||||||
Sbjct: 23209277 tgtaatgcct 23209268



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 594      cctgtgattgctgattagcatgtcaataagtcgatctggcctttctttatgcttgttagc 653
                |||||| ||||||| || |||||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 23207910 cctgtggttgctgagtaacatgtcgataaggcgatctggtctttctttgtgcttattagc 23207851

                                             
Query: 654      ataaacatttatagcagcaccaagaacct 682
                 ||||||||||||||||| || |||||||
Sbjct: 23207850 gtaaacatttatagcagcccccagaacct 23207822



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 679      acctgatcccattcatcatcttctatg 705
                |||||||||||||||||||| ||||||
Sbjct: 23207289 acctgatcccattcatcatcatctatg 23207263
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>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710A02
          Length = 157201

 Score =  143 bits (72), Expect = 9e-31
 Identities = 96/104 (92%)
 Strand = Plus / Minus

                                                                          
Query: 494    cctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggctatctggaatg 553
              ||||||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 140720 cctgatgagcaacatattgaacatcagcaacacttccacttcgggaggctatctggaatg 140661

                                                          
Query: 554    cactttttagacggccgcaaacaacgcaagcaagtactttcctg 597
              |||||||||||||||| || ||||| || |||||||||||||||
Sbjct: 140660 cactttttagacggccacacacaacacaggcaagtactttcctg 140617



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                          
Query: 427    aattacatgtactgggccagccattgcttgcacatatcaagaaccggcaatgcatttgca 486
              |||||||||||||| || | |||||||||||||||||||||||| || || |||||||||
Sbjct: 141496 aattacatgtactgagctaaccattgcttgcacatatcaagaacgggtaacgcatttgca 141437

                        
Query: 487    tgtaatgcct 496
              ||||||||||
Sbjct: 141436 tgtaatgcct 141427



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                          
Query: 594    cctgtgattgctgattagcatgtcaataagtcgatctggcctttctttatgcttgttagc 653
              |||||| ||||||| || |||||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 140069 cctgtggttgctgagtaacatgtcgataaggcgatctggtctttctttgtgcttattagc 140010

                                           
Query: 654    ataaacatttatagcagcaccaagaacct 682
               ||||||||||||||||| || |||||||
Sbjct: 140009 gtaaacatttatagcagcccccagaacct 139981



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 679    acctgatcccattcatcatcttctatg 705
              |||||||||||||||||||| ||||||
Sbjct: 139448 acctgatcccattcatcatcatctatg 139422
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>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence
          Length = 133305

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                         
Query: 494   cctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggctatctggaatg 553
             ||||||| |||||||| ||||||||||| || ||||||||||| || || || || ||||
Sbjct: 73388 cctgatgagcaacatactgaacatcagccacacttccacttcgcgaagcaatttgaaatg 73329

                                                         
Query: 554   cactttttagacggccgcaaacaacgcaagcaagtactttcctg 597
             ||||||||| ||| || || || || |||||||| |||||||||
Sbjct: 73328 cactttttaaacgaccacacactacacaagcaagaactttcctg 73285



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 428   attacatgtactgggccagccattgcttgcacatatcaagaaccggcaatgcatttgcat 487
             ||||||||||||| |||| ||||||||| ||||| ||||| || || | |||||| ||||
Sbjct: 75099 attacatgtactgtgccaaccattgcttacacatgtcaagcactggaagtgcattcgcat 75040

              
Query: 488   g 488
             |
Sbjct: 75039 g 75039
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>ref|NM_128132.1| Arabidopsis thaliana unknown protein AT2G25730 mRNA, complete cds
          Length = 7844

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 169/215 (78%)
 Strand = Plus / Minus

                                                                        
Query: 484  gcatgtaatgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggct 543
            |||||||| || ||||| || ||||||||||||||||| |||||||| |||   || || 
Sbjct: 7340 gcatgtaaggcttgatgagctacatattgaacatcagccacgcttccgcttttagatgca 7281

                                                                        
Query: 544  atctggaatgcactttttagacggccgcaaacaacgcaagcaagtactttcctgtgattg 603
            ||||||||||| ||||| || ||||| || || || ||||| || || || |  ||  ||
Sbjct: 7280 atctggaatgcgcttttcaggcggccacataccacacaagccagcacctttcgatggctg 7221

                                                                        
Query: 604  ctgattagcatgtcaataagtcgatctggcctttctttatgcttgttagcataaacattt 663
            ||  ||| |||||| || || || || || |  ||||| |||||||| ||||| | ||| 
Sbjct: 7220 cttgttaacatgtcgatgagacggtcagggcgctctttgtgcttgttggcatatatattg 7161

                                               
Query: 664  atagcagcaccaagaacctgatcccattcatcatc 698
            || |||||||| || ||||||||||| ||||||||
Sbjct: 7160 atggcagcacccaggacctgatcccagtcatcatc 7126
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>gb|BT001077.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, complete cds
          Length = 1599

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 169/215 (78%)
 Strand = Plus / Minus

                                                                        
Query: 484  gcatgtaatgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggct 543
            |||||||| || ||||| || ||||||||||||||||| |||||||| |||   || || 
Sbjct: 1544 gcatgtaaggcttgatgagctacatattgaacatcagccacgcttccgcttttagatgca 1485

                                                                        
Query: 544  atctggaatgcactttttagacggccgcaaacaacgcaagcaagtactttcctgtgattg 603
            ||||||||||| ||||| || ||||| || || || ||||| || || || |  ||  ||
Sbjct: 1484 atctggaatgcgcttttcaggcggccacataccacacaagccagcacctttcgatggctg 1425

                                                                        
Query: 604  ctgattagcatgtcaataagtcgatctggcctttctttatgcttgttagcataaacattt 663
            ||  ||| |||||| || || || || || |  ||||| |||||||| ||||| | ||| 
Sbjct: 1424 cttgttaacatgtcgatgagacggtcagggcgctctttgtgcttgttggcatatatattg 1365

                                               
Query: 664  atagcagcaccaagaacctgatcccattcatcatc 698
            || |||||||| || ||||||||||| ||||||||
Sbjct: 1364 atggcagcacccaggacctgatcccagtcatcatc 1330
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>gb|AY048285.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, complete cds
          Length = 2193

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 169/215 (78%)
 Strand = Plus / Minus

                                                                        
Query: 484  gcatgtaatgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggct 543
            |||||||| || ||||| || ||||||||||||||||| |||||||| |||   || || 
Sbjct: 1756 gcatgtaaggcttgatgagctacatattgaacatcagccacgcttccgcttttagatgca 1697

                                                                        
Query: 544  atctggaatgcactttttagacggccgcaaacaacgcaagcaagtactttcctgtgattg 603
            ||||||||||| ||||| || ||||| || || || ||||| || || || |  ||  ||
Sbjct: 1696 atctggaatgcgcttttcaggcggccacataccacacaagccagcacctttcgatggctg 1637

                                                                        
Query: 604  ctgattagcatgtcaataagtcgatctggcctttctttatgcttgttagcataaacattt 663
            ||  ||| |||||| || || || || || |  ||||| |||||||| ||||| | ||| 
Sbjct: 1636 cttgttaacatgtcgatgagacggtcagggcgctctttgtgcttgttggcatatatattg 1577

                                               
Query: 664  atagcagcaccaagaacctgatcccattcatcatc 698
            || |||||||| || ||||||||||| ||||||||
Sbjct: 1576 atggcagcacccaggacctgatcccagtcatcatc 1542
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>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete
             sequence
          Length = 100745

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 484   gcatgtaatgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggct 543
             |||||||| || ||||| || ||||||||||||||||| |||||||| |||   || || 
Sbjct: 73770 gcatgtaaggcttgatgagctacatattgaacatcagccacgcttccgcttttagatgca 73829

                                       
Query: 544   atctggaatgcactttttagacggcc 569
             ||||||||||| ||||| || |||||
Sbjct: 73830 atctggaatgcgcttttcaggcggcc 73855
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>emb|BX819218.1|CNS0AADV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZH06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 904

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 168/215 (78%)
 Strand = Plus / Minus

                                                                       
Query: 484 gcatgtaatgcctgatgggcaacatattgaacatcagctacgcttccacttcgtgaggct 543
           |||||||| || ||||| || ||||||||||||| ||| |||||||| |||   || || 
Sbjct: 483 gcatgtaaggcttgatgagctacatattgaacataagccacgcttccgcttttagatgca 424

                                                                       
Query: 544 atctggaatgcactttttagacggccgcaaacaacgcaagcaagtactttcctgtgattg 603
           ||||||||||| ||||| || ||||| || || || ||||| || || || |  ||  ||
Sbjct: 423 atctggaatgcgcttttcaggcggccacataccacacaagccagcacctttcgatggctg 364

                                                                       
Query: 604 ctgattagcatgtcaataagtcgatctggcctttctttatgcttgttagcataaacattt 663
           ||  ||| |||||| || || || || || |  ||||| |||||||| ||||| | ||| 
Sbjct: 363 cttgttaacatgtcgatgagacggtcagggcgctctttgtgcttgttggcatatatattg 304

                                              
Query: 664 atagcagcaccaagaacctgatcccattcatcatc 698
           || |||||||| || ||||||||||| ||||||||
Sbjct: 303 atggcagcacccaggacctgatcccagtcatcatc 269
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>gb|AE004210.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 118
            of 251 of the complete chromosome
          Length = 10763

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 32   caaagctgctacttaaagagtg 53
            ||||||||||||||||||||||
Sbjct: 3893 caaagctgctacttaaagagtg 3914
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>gb|AC011333.7| Homo sapiens chromosome 5 clone CTC-229L21, complete sequence
          Length = 159964

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 225   cacacataacgcatacatgcac 246
             ||||||||||||||||||||||
Sbjct: 57401 cacacataacgcatacatgcac 57422
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>gb|AC142314.1| Pan troglodytes BAC clone RP43-48H9 from 7, complete sequence
          Length = 198313

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 273   actcacccgaaaacatatacagatg 297
             ||||||| |||||||||||||||||
Sbjct: 56854 actcaccagaaaacatatacagatg 56830
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>gb|AF453997.1| Tetrahymena thermophila protein tyrosine kinase 1 (TtPTK1) gene,
           complete cds
          Length = 1650

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 375 cttcttcttttcactaattta 395
           |||||||||||||||||||||
Sbjct: 318 cttcttcttttcactaattta 298
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>gb|AC020581.10| Homo sapiens chromosome 7 clone RP11-88K4, complete sequence
          Length = 152989

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 273   actcacccgaaaacatatacagatg 297
             ||||||| |||||||||||||||||
Sbjct: 62381 actcaccagaaaacatatacagatg 62357
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>emb|AL031582.1|DMC118B3 Drosophila melanogaster cosmid clone 118B3
          Length = 24263

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 607  attagcatgtcaataagtcga 627
            |||||||||||||||||||||
Sbjct: 5064 attagcatgtcaataagtcga 5084
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>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 161668

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 607   attagcatgtcaataagtcga 627
             |||||||||||||||||||||
Sbjct: 88527 attagcatgtcaataagtcga 88547
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>emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 in linkage group 5,
             complete sequence
          Length = 170241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 507   atattgaacatcagctacgct 527
             |||||||||||||||||||||
Sbjct: 18973 atattgaacatcagctacgct 18953
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>gb|AC009329.20|AC009329 Human Chromosome 7 clone RP11-264E12, complete sequence
          Length = 160551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 273   actcacccgaaaacatatacagatg 297
             ||||||| |||||||||||||||||
Sbjct: 57147 actcaccagaaaacatatacagatg 57123
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>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
             sequence
          Length = 315092

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 607   attagcatgtcaataagtcga 627
             |||||||||||||||||||||
Sbjct: 71894 attagcatgtcaataagtcga 71914
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>gb|AC162896.3| Mus musculus chromosome 5, clone RP24-318J14, complete sequence
          Length = 180319

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   catacatgcactcccatgtg 255
             ||||||||||||||||||||
Sbjct: 57879 catacatgcactcccatgtg 57860
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>gb|AC110256.12| Mus musculus chromosome 6, clone RP23-274K3, complete sequence
          Length = 240425

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    gcccagagcagaattctgct 360
              ||||||||||||||||||||
Sbjct: 150135 gcccagagcagaattctgct 150116
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>gb|AC127566.3| Mus musculus BAC clone RP24-187F3 from chromosome 5, complete sequence
          Length = 176559

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    catacatgcactcccatgtg 255
              ||||||||||||||||||||
Sbjct: 173075 catacatgcactcccatgtg 173056
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>gb|AC131764.3| Mus musculus BAC clone RP24-239L16 from chromosome 6, complete sequence
          Length = 210145

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    gcccagagcagaattctgct 360
              ||||||||||||||||||||
Sbjct: 194277 gcccagagcagaattctgct 194296
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>emb|Z69302.1|CEF40F8 Caenorhabditis elegans Cosmid F40F8, complete sequence
          Length = 26497

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 542   ctatctggaatgcactttttagacggcc 569
             |||||| |||||||||||||| ||||||
Sbjct: 10508 ctatctcgaatgcactttttaaacggcc 10535
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>gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome 7, complete sequence
          Length = 204757

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   tttctggattgtccatccct 175
             ||||||||||||||||||||
Sbjct: 15651 tttctggattgtccatccct 15632
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>gb|AY898647.1| Plasmodium falciparum tryptophan-rich antigen 3 gene, complete cds
          Length = 3075

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 685  tcccattcatcatcttctat 704
            ||||||||||||||||||||
Sbjct: 2819 tcccattcatcatcttctat 2800
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>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
              sequence
          Length = 250078

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 685    tcccattcatcatcttctat 704
              ||||||||||||||||||||
Sbjct: 115745 tcccattcatcatcttctat 115726
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>emb|AL031672.13|HS691N24 Human DNA sequence from clone RP4-691N24 on chromosome 20p11.1-11.22
             Contains the 3' part of the KIAA0980 gene, the 3' end of
             the gene for a novel protein (KIAA0186) and a CpG island,
             complete sequence
          Length = 100958

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ccacctggcccagagcagaa 353
             ||||||||||||||||||||
Sbjct: 55381 ccacctggcccagagcagaa 55400
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>emb|AL022238.1|HS1042K10 Human DNA sequence from clone RP5-1042K10 on chromosome 22q13.1-13.2,
             complete sequence
          Length = 184180

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tttgctatacaaatgtgcat 93
             ||||||||||||||||||||
Sbjct: 19207 tttgctatacaaatgtgcat 19226
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>gb|AC079600.19| Homo sapiens 12 BAC RP11-609L23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 158395

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 199   atgcaatggaactgcaaaatttac 222
             ||||||||||| ||||||||||||
Sbjct: 35960 atgcaatggaaatgcaaaatttac 35983
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>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence
          Length = 202765

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   tcttttcactaatttaaatt 399
             ||||||||||||||||||||
Sbjct: 88103 tcttttcactaatttaaatt 88122
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>gb|BC091665.1| Danio rerio im:7138823, mRNA (cDNA clone IMAGE:7138823), partial
           cds
          Length = 1895

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 atggaactgcaaaatttaca 223
           ||||||||||||||||||||
Sbjct: 121 atggaactgcaaaatttaca 140
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>gb|AC093584.3| Homo sapiens BAC clone RP13-531E5 from 4, complete sequence
          Length = 99897

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 580   caagcaagtactttcctgtgattg 603
             ||||||||||||||||| ||||||
Sbjct: 43789 caagcaagtactttcctttgattg 43766
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>gb|AC139147.2| Homo sapiens chromosome 15, clone RP11-107D24, complete sequence
          Length = 124401

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  cacctggcccagagcagaat 354
            ||||||||||||||||||||
Sbjct: 4045 cacctggcccagagcagaat 4026
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>gb|AC100720.8| Homo sapiens chromosome 15, clone CTD-2317M11, complete sequence
          Length = 81084

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   cacctggcccagagcagaat 354
             ||||||||||||||||||||
Sbjct: 61659 cacctggcccagagcagaat 61640
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>emb|BX957256.6| Zebrafish DNA sequence from clone DKEY-23N7 in linkage group 7,
             complete sequence
          Length = 227909

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   atggaactgcaaaatttaca 223
             ||||||||||||||||||||
Sbjct: 74882 atggaactgcaaaatttaca 74901
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>gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, complete sequence
          Length = 169442

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   tttctggattgtccatccct 175
             ||||||||||||||||||||
Sbjct: 65938 tttctggattgtccatccct 65957
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>dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320a,
            complete sequence
          Length = 76227

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  aaaacatatacagatgagtg 301
            ||||||||||||||||||||
Sbjct: 9099 aaaacatatacagatgagtg 9118
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>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete
              sequence
          Length = 223794

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    gcatcaacagccactcaccc 280
              ||||||||||||||||||||
Sbjct: 172894 gcatcaacagccactcaccc 172875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,404,450
Number of Sequences: 3902068
Number of extensions: 6404450
Number of successful extensions: 115258
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115125
Number of HSP's gapped (non-prelim): 133
length of query: 705
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 682
effective length of database: 17,143,297,704
effective search space: 11691729034128
effective search space used: 11691729034128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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