ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62p15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB072977.1| Oryza sativa OsBLE1 mRNA for BLE1 protein, compl... 293 3e-76
2dbj|AK104970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
3dbj|AK099375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
4dbj|AK071296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
5gb|AY104595.1| Zea mays PCO064868 mRNA sequence 266 6e-68
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
7gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
8ref|XM_475523.1| Oryza sativa (japonica cultivar-group), predic... 149 9e-33
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
10dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
11ref|NM_106270.2| Arabidopsis thaliana unknown protein AT1G76200 ... 56 1e-04
12emb|BX813731.1|CNS0AE2P Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
13emb|BX817421.1|CNS0AANH Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
14gb|AY085964.1| Arabidopsis thaliana clone 20257 mRNA, complete s... 56 1e-04
15emb|AL844575.4| Mouse DNA sequence from clone RP23-156F1 on chro... 44 0.40
16ref|NM_111917.3| Arabidopsis thaliana DNA binding / transcriptio... 42 1.6
17gb|AC159244.4| Mus musculus BAC clone RP24-309L4 from chromosome... 42 1.6
18gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC... 42 1.6
19emb|AL591031.3| Human DNA sequence from clone RP11-151D14 on chr... 42 1.6
20gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-1... 42 1.6
21emb|AL113665.1|CNS01B1L Botrytis cinerea strain T4 cDNA library 42 1.6
22gb|AC093113.4| Homo sapiens BAC clone RP11-789A18 from 2, comple... 42 1.6
23gb|BT002502.1| Arabidopsis thaliana putative bZIP transcription ... 42 1.6
24ref|NM_121752.2| Arabidopsis thaliana unknown protein AT5G17460 ... 40 6.2
25gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
26gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, compl... 40 6.2
27gb|AF437782.1| Myoprocta acouchy isolate MAC1553 cytochrome b ge... 40 6.2
28gb|AF437781.1| Myoprocta acouchy isolate MAC1603 cytochrome b ge... 40 6.2
29ref|XM_567100.1| Cryptococcus neoformans var. neoformans JEC21 u... 40 6.2
30gb|AY310810.1| Nicotiana benthamiana clone 12-137 unknown mRNA 40 6.2
31gb|BC090742.1| Danio rerio im:6893299, mRNA (cDNA clone IMAGE:69... 40 6.2
32gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.2
33gb|AY091431.1| Arabidopsis thaliana unknown protein (At5g17460) ... 40 6.2
34gb|AY050834.1| Arabidopsis thaliana At5g17460 mRNA sequence 40 6.2
35emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
36emb|AL391150.1|ATK3M16 Arabidopsis thaliana DNA chromosome 5, BA... 40 6.2
37emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, ... 40 6.2
38emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, B... 40 6.2
39gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B22 ma... 40 6.2
40gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromoso... 40 6.2
41gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.2
42dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
43gb|AC092633.2| Homo sapiens BAC clone RP11-339P1 from 2, complet... 40 6.2
44gb|AC005294.1| Homo sapiens 12 BAC GSHB-410F4 (Genome Systems Hu... 40 6.2
45ref|NM_211310.1| Eremothecium gossypii AFR408Cp (AFR408C), mRNA 40 6.2
46emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
47dbj|AP006637.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.2
48gb|U17043.1|LDU17043 Leishmania donovani receptor-adenylate cycl... 40 6.2
49emb|X80072.1|SGLO2RN S.gregaria Lo2 mRNA 40 6.2 
>dbj|AB072977.1| Oryza sativa OsBLE1 mRNA for BLE1 protein, complete cds
          Length = 598

 Score =  293 bits (148), Expect = 3e-76
 Identities = 175/184 (95%)
 Strand = Plus / Minus

                                                                       
Query: 277 catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcatacccaaga 336
           |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 244 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcatgcccaaga 185

                                                                       
Query: 337 gcacagcgccgtcctgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggc 396
           | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 184 gaacagcaccgtcctgcttagccctgtagaaaacccaaaaccacatgacggcgcagaggc 125

                                                                       
Query: 397 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtagcccttgtaggtcg 456
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 124 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtaccccttgtacgtcg 65

               
Query: 457 tgcc 460
           ||||
Sbjct: 64  tgcc 61
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>dbj|AK104970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F11, full
           insert sequence
          Length = 605

 Score =  293 bits (148), Expect = 3e-76
 Identities = 175/184 (95%)
 Strand = Plus / Minus

                                                                       
Query: 277 catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcatacccaaga 336
           |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 288 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcatgcccaaga 229

                                                                       
Query: 337 gcacagcgccgtcctgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggc 396
           | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 228 gaacagcaccgtcctgcttagccctgtagaaaacccaaaaccacatgacggcgcagaggc 169

                                                                       
Query: 397 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtagcccttgtaggtcg 456
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 168 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtaccccttgtacgtcg 109

               
Query: 457 tgcc 460
           ||||
Sbjct: 108 tgcc 105
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>dbj|AK099375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033056C02, full
           insert sequence
          Length = 597

 Score =  293 bits (148), Expect = 3e-76
 Identities = 175/184 (95%)
 Strand = Plus / Minus

                                                                       
Query: 277 catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcatacccaaga 336
           |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 283 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcatgcccaaga 224

                                                                       
Query: 337 gcacagcgccgtcctgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggc 396
           | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 223 gaacagcaccgtcctgcttagccctgtagaaaacccaaaaccacatgacggcgcagaggc 164

                                                                       
Query: 397 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtagcccttgtaggtcg 456
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 163 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtaccccttgtacgtcg 104

               
Query: 457 tgcc 460
           ||||
Sbjct: 103 tgcc 100
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>dbj|AK071296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I21, full
           insert sequence
          Length = 597

 Score =  293 bits (148), Expect = 3e-76
 Identities = 175/184 (95%)
 Strand = Plus / Minus

                                                                       
Query: 277 catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcatacccaaga 336
           |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 289 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcatgcccaaga 230

                                                                       
Query: 337 gcacagcgccgtcctgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggc 396
           | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 229 gaacagcaccgtcctgcttagccctgtagaaaacccaaaaccacatgacggcgcagaggc 170

                                                                       
Query: 397 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtagcccttgtaggtcg 456
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 169 ccttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtaccccttgtacgtcg 110

               
Query: 457 tgcc 460
           ||||
Sbjct: 109 tgcc 106
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>gb|AY104595.1| Zea mays PCO064868 mRNA sequence
          Length = 896

 Score =  266 bits (134), Expect = 6e-68
 Identities = 170/182 (93%)
 Strand = Plus / Minus

                                                                       
Query: 279 tgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcatacccaagagc 338
           |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 572 tgtccatgaccatgagagtggtcatcatgtccatcccaaggatgacgcaaacccaagagc 513

                                                                       
Query: 339 acagcgccgtcctgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggccc 398
             ||| || |||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 512 gtagcaccatcctgcttagccctgtagaaaacccagaaccacatcacggcgcagaggccc 453

                                                                       
Query: 399 ttgccggcgacggtgtgccagcgcttgttgtgggggatggtgtagcccttgtaggtcgtg 458
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 452 ttgccggcgacggtgtgccagcgcttgttgtgcgggatggtgtagcccttgtaggtggtg 393

             
Query: 459 cc 460
           ||
Sbjct: 392 cc 391
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  153 bits (77), Expect = 6e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                           
Query: 376     accacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtggggga 435
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201406 accacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtggggga 1201465

                                        
Query: 436     tggtgtagcccttgtaggtcgtgcc 460
               ||||||| |||||||| ||||||||
Sbjct: 1201466 tggtgtaccccttgtacgtcgtgcc 1201490



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                   
Query: 277     catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcat 328
               |||| ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 1199915 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcat 1199966



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                               
Query: 331     ccaagagcacagcgccgtcctgcttagccctgtagaaaatccaaaacc 378
               ||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 1200045 ccaagagaacagcaccgtcctgcttagccctgtagaaaacccaaaacc 1200092
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>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02,
             complete sequence
          Length = 90509

 Score =  153 bits (77), Expect = 6e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                         
Query: 376   accacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtggggga 435
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51692 accacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtggggga 51751

                                      
Query: 436   tggtgtagcccttgtaggtcgtgcc 460
             ||||||| |||||||| ||||||||
Sbjct: 51752 tggtgtaccccttgtacgtcgtgcc 51776



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                                 
Query: 277   catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcat 328
             |||| ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 50201 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcat 50252



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 331   ccaagagcacagcgccgtcctgcttagccctgtagaaaatccaaaacc 378
             ||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 50331 ccaagagaacagcaccgtcctgcttagccctgtagaaaacccaaaacc 50378
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>ref|XM_475523.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 291

 Score =  149 bits (75), Expect = 9e-33
 Identities = 81/83 (97%)
 Strand = Plus / Minus

                                                                       
Query: 378 cacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtgggggatg 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtgggggatg 48

                                  
Query: 438 gtgtagcccttgtaggtcgtgcc 460
           ||||| |||||||| ||||||||
Sbjct: 47  gtgtaccccttgtacgtcgtgcc 25



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 277 catgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcat 328
           |||| ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 265 catgcccatgaccatgtgagtgatcatcatgaccatcccaaggatgacgcat 214
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  115 bits (58), Expect = 1e-22
 Identities = 64/66 (96%)
 Strand = Plus / Minus

                                                                            
Query: 375      aaccacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtggggg 434
                |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 30332604 aaccacatgacggcgcagaggcccttgccggcgacggtgtgccaccgcttgttgtgcggg 30332545

                      
Query: 435      atggtg 440
                ||||||
Sbjct: 30332544 atggtg 30332539



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                      
Query: 279      tgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcataccc 332
                ||||||||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 30333617 tgtccatgaccatgagaatggtcatcatgaccatcccaaggatgacgcaaaccc 30333564



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                                
Query: 331      ccaagagcacagcgccgtcctgcttagccctgtagaaaatccaaaacc 378
                ||||||| ||||| || |||||||||||||||||||||| ||||||||
Sbjct: 30333489 ccaagagaacagcaccatcctgcttagccctgtagaaaacccaaaacc 30333442
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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548E04
          Length = 138037

 Score =  115 bits (58), Expect = 1e-22
 Identities = 64/66 (96%)
 Strand = Plus / Minus

                                                                         
Query: 375   aaccacatgacggcgcagaggcccttgccggcgacggtgtgccagcgcttgttgtggggg 434
             |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 79199 aaccacatgacggcgcagaggcccttgccggcgacggtgtgccaccgcttgttgtgcggg 79140

                   
Query: 435   atggtg 440
             ||||||
Sbjct: 79139 atggtg 79134



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                   
Query: 279   tgtccatgaccatgagagtgatcatcatggccatcccaaggatgacgcataccc 332
             ||||||||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 80212 tgtccatgaccatgagaatggtcatcatgaccatcccaaggatgacgcaaaccc 80159



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 331   ccaagagcacagcgccgtcctgcttagccctgtagaaaatccaaaacc 378
             ||||||| ||||| || |||||||||||||||||||||| ||||||||
Sbjct: 80084 ccaagagaacagcaccatcctgcttagccctgtagaaaacccaaaacc 80037
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>ref|NM_106270.2| Arabidopsis thaliana unknown protein AT1G76200 mRNA, complete cds
          Length = 559

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 351 tgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggcccttgccggcgacg 410
           ||||| |||||||| | |||||| |||||||| |||||||| | ||| || |||| ||||
Sbjct: 235 tgctttgccctgtacagaatccagaaccacataacggcgcacaagccttttccggtgacg 176

                   
Query: 411 gtgtgcca 418
           ||||||||
Sbjct: 175 gtgtgcca 168
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>emb|BX813731.1|CNS0AE2P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB36ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 456

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 351 tgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggcccttgccggcgacg 410
           ||||| |||||||| | |||||| |||||||| |||||||| | ||| || |||| ||||
Sbjct: 204 tgctttgccctgtacagaatccagaaccacataacggcgcacaagccttttccggtgacg 145

                   
Query: 411 gtgtgcca 418
           ||||||||
Sbjct: 144 gtgtgcca 137
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>emb|BX817421.1|CNS0AANH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL21ZD07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 447

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 351 tgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggcccttgccggcgacg 410
           ||||| |||||||| | |||||| |||||||| |||||||| | ||| || |||| ||||
Sbjct: 205 tgctttgccctgtacagaatccagaaccacataacggcgcacaagccttttccggtgacg 146

                   
Query: 411 gtgtgcca 418
           ||||||||
Sbjct: 145 gtgtgcca 138
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>gb|AY085964.1| Arabidopsis thaliana clone 20257 mRNA, complete sequence
          Length = 487

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 351 tgcttagccctgtagaaaatccaaaaccacatgacggcgcagaggcccttgccggcgacg 410
           ||||| |||||||| | |||||| |||||||| |||||||| | ||| || |||| ||||
Sbjct: 236 tgctttgccctgtacagaatccagaaccacataacggcgcacaagccttttccggtgacg 177

                   
Query: 411 gtgtgcca 418
           ||||||||
Sbjct: 176 gtgtgcca 169
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>emb|AL844575.4| Mouse DNA sequence from clone RP23-156F1 on chromosome 2, complete
            sequence
          Length = 190718

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 142  agggatgaaatgacatatggttgtgc 167
            |||||||||||||||||||| |||||
Sbjct: 9923 agggatgaaatgacatatgggtgtgc 9898
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>ref|NM_111917.3| Arabidopsis thaliana DNA binding / transcription factor AT3G10800
           mRNA, complete cds
          Length = 2283

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gaaggtgatgatgacgacgac 260
           |||||||||||||||||||||
Sbjct: 622 gaaggtgatgatgacgacgac 642
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>gb|AC159244.4| Mus musculus BAC clone RP24-309L4 from chromosome 12, complete sequence
          Length = 216500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 319    gatgacgcatacccaagagcacagc 343
              ||||||| |||||||||||||||||
Sbjct: 116643 gatgacgaatacccaagagcacagc 116619
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>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
             complete sequence
          Length = 80379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   gaaggtgatgatgacgacgac 260
             |||||||||||||||||||||
Sbjct: 36533 gaaggtgatgatgacgacgac 36513
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>emb|AL591031.3| Human DNA sequence from clone RP11-151D14 on chromosome 9q13-21.2
             Contains a novel gene and the ALDH1A1 gene for aldehyde
             dehydrogenase 1 family member A1, complete sequence
          Length = 136895

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   aaacaaattaacactttcaaa 135
             |||||||||||||||||||||
Sbjct: 92109 aaacaaattaacactttcaaa 92129
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>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
             sequence
          Length = 123655

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   atgaaatgacatatggttgtg 166
             |||||||||||||||||||||
Sbjct: 79718 atgaaatgacatatggttgtg 79698
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>emb|AL113665.1|CNS01B1L Botrytis cinerea strain T4 cDNA library
          Length = 636

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 271 catgtgcatgtccatgaccat 291
           |||||||||||||||||||||
Sbjct: 271 catgtgcatgtccatgaccat 251
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>gb|AC093113.4| Homo sapiens BAC clone RP11-789A18 from 2, complete sequence
          Length = 175556

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   taaacaaattaacactttcaa 134
             |||||||||||||||||||||
Sbjct: 84274 taaacaaattaacactttcaa 84294
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>gb|BT002502.1| Arabidopsis thaliana putative bZIP transcription factor (At3g10800)
           mRNA, complete cds
          Length = 2181

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 240 gaaggtgatgatgacgacgac 260
           |||||||||||||||||||||
Sbjct: 581 gaaggtgatgatgacgacgac 601
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>ref|NM_121752.2| Arabidopsis thaliana unknown protein AT5G17460 mRNA, complete cds
          Length = 2175

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  gaaggtgatgatgacgacga 259
            ||||||||||||||||||||
Sbjct: 1291 gaaggtgatgatgacgacga 1310
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     gaaggtgatgatgacgacga 259
               ||||||||||||||||||||
Sbjct: 2055310 gaaggtgatgatgacgacga 2055329
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>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence
          Length = 234127

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gaaggtgatgatgacgacga 259
              ||||||||||||||||||||
Sbjct: 173409 gaaggtgatgatgacgacga 173428
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>gb|AF437782.1| Myoprocta acouchy isolate MAC1553 cytochrome b gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1138

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ggttgtgcttttattagcag 179
           ||||||||||||||||||||
Sbjct: 348 ggttgtgcttttattagcag 367
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>gb|AF437781.1| Myoprocta acouchy isolate MAC1603 cytochrome b gene, complete cds;
           mitochondrial gene for mitochondrial product
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ggttgtgcttttattagcag 179
           ||||||||||||||||||||
Sbjct: 348 ggttgtgcttttattagcag 367
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>ref|XM_567100.1| Cryptococcus neoformans var. neoformans JEC21 uv excision repair
            protein rhp23 (CNA07500) partial mRNA
          Length = 1369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  gaaggtgatgatgacgacga 259
            ||||||||||||||||||||
Sbjct: 1039 gaaggtgatgatgacgacga 1058
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>gb|AY310810.1| Nicotiana benthamiana clone 12-137 unknown mRNA
          Length = 432

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 357 gccctgtagaaaatccaaaaccacatgacggc 388
           |||| ||||| || ||||||||||||||||||
Sbjct: 142 gcccggtagagaacccaaaaccacatgacggc 111
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>gb|BC090742.1| Danio rerio im:6893299, mRNA (cDNA clone IMAGE:6909257), partial
           cds
          Length = 2145

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 caatgggaaggtgatgatga 253
           ||||||||||||||||||||
Sbjct: 474 caatgggaaggtgatgatga 493
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 385     cggcgcagaggcccttgccggcgacggt 412
               ||||||||| ||||||||||||| ||||
Sbjct: 4250693 cggcgcagaagcccttgccggcgccggt 4250720
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>gb|AY091431.1| Arabidopsis thaliana unknown protein (At5g17460) mRNA, complete cds
          Length = 961

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 240 gaaggtgatgatgacgacga 259
           ||||||||||||||||||||
Sbjct: 439 gaaggtgatgatgacgacga 458
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>gb|AY050834.1| Arabidopsis thaliana At5g17460 mRNA sequence
          Length = 2191

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  gaaggtgatgatgacgacga 259
            ||||||||||||||||||||
Sbjct: 1290 gaaggtgatgatgacgacga 1309
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tgatgatgacgacgacgcct 264
             ||||||||||||||||||||
Sbjct: 94130 tgatgatgacgacgacgcct 94111
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>emb|AL391150.1|ATK3M16 Arabidopsis thaliana DNA chromosome 5, BAC clone K3M16 (ESSA project)
          Length = 26604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  gaaggtgatgatgacgacga 259
            ||||||||||||||||||||
Sbjct: 8314 gaaggtgatgatgacgacga 8295
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>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56
          Length = 196247

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     atttcttaaagaacccatga 29
              ||||||||||||||||||||
Sbjct: 169552 atttcttaaagaacccatga 169571
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>emb|AL021712.2|ATT10I14 Arabidopsis thaliana DNA chromosome 4, BAC clone T10I14 (ESSA project)
          Length = 82891

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    atttcttaaagaacccatga 29
             ||||||||||||||||||||
Sbjct: 12210 atttcttaaagaacccatga 12229
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>gb|AC003672.3| Arabidopsis thaliana chromosome 2 clone F16B22 map m336, complete
             sequence
          Length = 109375

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gaaggtgatgatgacgacga 259
             ||||||||||||||||||||
Sbjct: 67040 gaaggtgatgatgacgacga 67059
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>gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromosome ul, complete sequence
          Length = 215430

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    gagcacagcgccgtcctgct 354
              ||||||||||||||||||||
Sbjct: 161099 gagcacagcgccgtcctgct 161118
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 383     gacggcgcagaggcccttgc 402
               ||||||||||||||||||||
Sbjct: 1169975 gacggcgcagaggcccttgc 1169956
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 245      tgatgatgacgacgacgcct 264
                ||||||||||||||||||||
Sbjct: 20990898 tgatgatgacgacgacgcct 20990879
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>gb|AC092633.2| Homo sapiens BAC clone RP11-339P1 from 2, complete sequence
          Length = 135863

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  tgcttttattagcagagact 184
            ||||||||||||||||||||
Sbjct: 8849 tgcttttattagcagagact 8868
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>gb|AC005294.1| Homo sapiens 12 BAC GSHB-410F4 (Genome Systems Human Bac Library)
             complete sequence
          Length = 113762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   catgagagtgatcatcatgg 308
             ||||||||||||||||||||
Sbjct: 34216 catgagagtgatcatcatgg 34235
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>ref|NM_211310.1| Eremothecium gossypii AFR408Cp (AFR408C), mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 gacggcgcagaggcccttgc 402
           ||||||||||||||||||||
Sbjct: 376 gacggcgcagaggcccttgc 395
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>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04,
             complete sequence
          Length = 140890

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   tgatgatgacgacgacgcct 264
             ||||||||||||||||||||
Sbjct: 36305 tgatgatgacgacgacgcct 36286
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>dbj|AP006637.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208b,
             complete sequence
          Length = 33484

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 265   catgctcatgtgcatgtccatgaccatg 292
             |||| |||||| ||||||||||||||||
Sbjct: 15740 catgatcatgtccatgtccatgaccatg 15713
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>gb|U17043.1|LDU17043 Leishmania donovani receptor-adenylate cyclase (RAC-B) gene, complete
            cds
          Length = 4824

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  gacgacgacgcctcatgctc 271
            ||||||||||||||||||||
Sbjct: 1406 gacgacgacgcctcatgctc 1387
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>emb|X80072.1|SGLO2RN S.gregaria Lo2 mRNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 tcatgctcatgtgcatgtcc 283
           ||||||||||||||||||||
Sbjct: 299 tcatgctcatgtgcatgtcc 318


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,252,588
Number of Sequences: 3902068
Number of extensions: 4252588
Number of successful extensions: 87156
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86932
Number of HSP's gapped (non-prelim): 224
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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