ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62p14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... 283 2e-76
2PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... 53 8e-07
3PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... 43 6e-04
4PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.... 40 0.005
5Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654 39 0.015
6PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (... 36 0.074
7RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigment... 30 4.0

>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score =  283 bits (725), Expect = 2e-76
 Identities = 132/132 (100%), Positives = 132/132 (100%)
 Frame = -1

Query: 594 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSH 415
           ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSH
Sbjct: 237 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSH 296

Query: 414 LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSC 235
           LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSC
Sbjct: 297 LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSC 356

Query: 234 VHDSCFPTTLAS 199
           VHDSCFPTTLAS
Sbjct: 357 VHDSCFPTTLAS 368



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>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid|
           phosphatase) (APase6)
          Length = 614

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
 Frame = -1

Query: 594 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGTIFVVAG 430
           E+ + L  +Y VD    GH+H YER  PL  +  ++      + T+Y+        ++ G
Sbjct: 481 EAFEGLLLKYGVDAYLSGHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIING 540

Query: 429 GGG-----SHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 265
             G     S  S         ++     YGF+KLT FN ++L +E ++  DG V DS T+
Sbjct: 541 MAGNIESHSEFSDGEGLTNITALLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600



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>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC|
           3.1.3.2) (PAP)
          Length = 469

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
 Frame = -1

Query: 570 RYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSH-- 415
           +Y+VD+ + GHVH YER+      +  N      +G        +  I++  G GG+   
Sbjct: 346 KYKVDVVFAGHVHAYERS-----ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEG 400

Query: 414 -LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 289
            L+      PK+S FR+  +G   L   N +   F + ++ DG
Sbjct: 401 LLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443



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>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)|
           (Manganese(II) purple acid phosphatase)
          Length = 464

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
 Frame = -1

Query: 570 RYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSG------TMNGTIFVVAGGGGS--- 418
           +Y+VD+ + GHVH YER+      +  N      +G        +  +++  G GG+   
Sbjct: 340 QYKVDVVFAGHVHAYERS-----ERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEG 394

Query: 417 HLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 289
             ++ T   PK+S FR+  +G       N +   + + ++ DG
Sbjct: 395 LATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDG 437



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>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654|
          Length = 529

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 38/114 (33%)
 Frame = -1

Query: 579 LWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-------DKTHYSGTMNGTIFVVAGGGG 421
           L+ +Y+VD+   GH H+YER+ PL  +   +         ++    +  GT+ +V GGGG
Sbjct: 372 LFDQYQVDLVVCGHEHHYERSHPLRGALGTDTRTPIPVDTRSDLIDSTRGTVHLVIGGGG 431

Query: 420 SHLSSYTTAIPK-----------------------------WSIFRDHD--YGF 352
           +   +     P+                             WS FRD D  YGF
Sbjct: 432 TSKPTNALLFPQPRCQVITGVGDFDPAIRRKPSIFVLEDAPWSAFRDRDNPYGF 485



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>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)|
           (PAP)
          Length = 432

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
 Frame = -1

Query: 570 RYRVDIAYFGHVHNYERTCPLYQ-SQCVNADKTHYSGTMNGTIFVVAGGGGSH---LSSY 403
           +Y+VD+ + GHVH YER+  +   +  +           +  +++  G  G++    S+ 
Sbjct: 313 KYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNM 372

Query: 402 TTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 265
               P++S FR+  +G       N +   F + ++ DG   ++ ++
Sbjct: 373 IQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 418



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>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2095

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
 Frame = -1

Query: 528  YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 355
            + ++ PL Q  S  VN ++  + G    T      G     +   T    WS   + + G
Sbjct: 914  HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973

Query: 354  FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 175
             + +   N   L   + +S +G +YDS+         L  +HD+C  +       S+  H
Sbjct: 974  KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024

Query: 174  VNVMEGHPSNKIV 136
            +++ +  P  K+V
Sbjct: 1025 LSIEKSRPEVKLV 1037


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,551,880
Number of Sequences: 219361
Number of extensions: 1276252
Number of successful extensions: 3193
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3188
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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