Clone Name | rbah62p14 |
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Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 283 bits (725), Expect = 2e-76 Identities = 132/132 (100%), Positives = 132/132 (100%) Frame = -1 Query: 594 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSH 415 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSH Sbjct: 237 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSH 296 Query: 414 LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSC 235 LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSC Sbjct: 297 LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSC 356 Query: 234 VHDSCFPTTLAS 199 VHDSCFPTTLAS Sbjct: 357 VHDSCFPTTLAS 368
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 52.8 bits (125), Expect = 8e-07 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 10/120 (8%) Frame = -1 Query: 594 ESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGTIFVVAG 430 E+ + L +Y VD GH+H YER PL + ++ + T+Y+ ++ G Sbjct: 481 EAFEGLLLKYGVDAYLSGHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIING 540 Query: 429 GGG-----SHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 265 G S S ++ YGF+KLT FN ++L +E ++ DG V DS T+ Sbjct: 541 MAGNIESHSEFSDGEGLTNITALLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 43.1 bits (100), Expect = 6e-04 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Frame = -1 Query: 570 RYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSH-- 415 +Y+VD+ + GHVH YER+ + N +G + I++ G GG+ Sbjct: 346 KYKVDVVFAGHVHAYERS-----ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEG 400 Query: 414 -LSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 289 L+ PK+S FR+ +G L N + F + ++ DG Sbjct: 401 LLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 40.0 bits (92), Expect = 0.005 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Frame = -1 Query: 570 RYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSG------TMNGTIFVVAGGGGS--- 418 +Y+VD+ + GHVH YER+ + N +G + +++ G GG+ Sbjct: 340 QYKVDVVFAGHVHAYERS-----ERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEG 394 Query: 417 HLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 289 ++ T PK+S FR+ +G N + + + ++ DG Sbjct: 395 LATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDG 437
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 38.5 bits (88), Expect = 0.015 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 38/114 (33%) Frame = -1 Query: 579 LWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-------DKTHYSGTMNGTIFVVAGGGG 421 L+ +Y+VD+ GH H+YER+ PL + + ++ + GT+ +V GGGG Sbjct: 372 LFDQYQVDLVVCGHEHHYERSHPLRGALGTDTRTPIPVDTRSDLIDSTRGTVHLVIGGGG 431 Query: 420 SHLSSYTTAIPK-----------------------------WSIFRDHD--YGF 352 + + P+ WS FRD D YGF Sbjct: 432 TSKPTNALLFPQPRCQVITGVGDFDPAIRRKPSIFVLEDAPWSAFRDRDNPYGF 485
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 36.2 bits (82), Expect = 0.074 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Frame = -1 Query: 570 RYRVDIAYFGHVHNYERTCPLYQ-SQCVNADKTHYSGTMNGTIFVVAGGGGSH---LSSY 403 +Y+VD+ + GHVH YER+ + + + + +++ G G++ S+ Sbjct: 313 KYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNM 372 Query: 402 TTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 265 P++S FR+ +G N + F + ++ DG ++ ++ Sbjct: 373 IQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 418
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 30.4 bits (67), Expect = 4.0 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Frame = -1 Query: 528 YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 355 + ++ PL Q S VN ++ + G T G + T WS + + G Sbjct: 914 HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973 Query: 354 FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 175 + + N L + +S +G +YDS+ L +HD+C + S+ H Sbjct: 974 KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024 Query: 174 VNVMEGHPSNKIV 136 +++ + P K+V Sbjct: 1025 LSIEKSRPEVKLV 1037 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,551,880 Number of Sequences: 219361 Number of extensions: 1276252 Number of successful extensions: 3193 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3188 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)