Clone Name | rbah62p12 |
---|---|
Clone Library Name | barley_pub |
>emb|AM039894.1| Hordeum vulgare mRNA for putative AdoMet synthase 2 (sam2 gene) Length = 1297 Score = 170 bits (86), Expect = 9e-40 Identities = 93/94 (98%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 82 agaccaagaataaccc-cactgtgatgtcttcttcttaggcagatgccttgtcgaacttg 140 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 agaccaagaataaccctcactgtgatgtcttcttcttaggcagatgccttgtcgaacttg 1238 Query: 141 aggggcttcaccacctcccaggtgaagtcggcat 174 |||||||||||||||||||||||||||||||||| Sbjct: 1237 aggggcttcaccacctcccaggtgaagtcggcat 1204
>dbj|D63835.1|BLYSAS Barley mRNA for S-adenosylmethionine synthetase, complete cds Length = 1353 Score = 159 bits (80), Expect = 3e-36 Identities = 142/162 (87%), Gaps = 8/162 (4%) Strand = Plus / Minus Query: 21 gatgtcgaatgcttcttcttacttcccaggagccaaaggat-------tgttgaactaga 73 ||||| |||||||||||||||||||| |||||| ||||||| || ||||| || Sbjct: 1342 gatgttgaatgcttcttcttacttccgaggagcaaaaggatcccgccttgccgaacttga 1283 Query: 74 gtggcagcagaccaagaataaccc-cactgtgatgtcttcttcttaggcagatgccttgt 132 | |||| ||||||||||| ||||| || |||||||||||||||||| ||||||||||||| Sbjct: 1282 gaggcatcagaccaagaagaaccctcaatgtgatgtcttcttcttaagcagatgccttgt 1223 Query: 133 cgaacttgaggggcttcaccacctcccaggtgaagtcggcat 174 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1222 cgaacttgaggggcttcaccacctcccaggtgaagtcagcat 1181
>emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 Score = 151 bits (76), Expect = 8e-34 Identities = 141/162 (87%), Gaps = 8/162 (4%) Strand = Plus / Minus Query: 21 gatgtcgaatgcttcttcttacttcccaggagccaaaggat-------tgttgaactaga 73 ||||| |||||||||||||||||||| |||||| ||||||| || ||||| || Sbjct: 1369 gatgttgaatgcttcttcttacttccgaggagcaaaaggatcccgccttgccgaacttga 1310 Query: 74 gtggcagcagaccaagaataaccc-cactgtgatgtcttcttcttaggcagatgccttgt 132 | |||| ||||||||||| ||||| || ||||||||||| |||||| ||||||||||||| Sbjct: 1309 gaggcatcagaccaagaagaaccctcaatgtgatgtcttgttcttaagcagatgccttgt 1250 Query: 133 cgaacttgaggggcttcaccacctcccaggtgaagtcggcat 174 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 cgaacttgaggggcttcaccacctcccaggtgaagtcagcat 1208
>emb|AM039895.1| Hordeum vulgare mRNA for putative AdoMet synthase 3 (sam3 gene) Length = 1447 Score = 137 bits (69), Expect = 1e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 66 gaactagagtggcagcagaccaagaataaccccactgtgatgtcttcttcttaggcagat 125 ||||| ||| |||| | ||||||||| | ||| | ||||||||||| ||||||||||||| Sbjct: 1318 gaacttgagaggcatctgaccaagaaaaccccgagtgtgatgtcttgttcttaggcagat 1259 Query: 126 gccttgtcgaacttgaggggcttcaccacctcccaggtgaagtcggcat 174 |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1258 gccttgtcgaacttgaggggcttcaccacctcccaggtgaagtcagcat 1210
>gb|BT016479.1| Zea mays clone Contig312 mRNA sequence Length = 1352 Score = 69.9 bits (35), Expect = 2e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 137 cttgaggggcttcaccacctcccaggtgaagtcgg 171 ||||||||||||||||||||||||||||||||||| Sbjct: 1001 cttgaggggcttcaccacctcccaggtgaagtcgg 967
>gb|AY039010.1| Elaeis oleifera S-adenosyl methionine synthetase (SAMS1) mRNA, partial cds Length = 545 Score = 69.9 bits (35), Expect = 2e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 137 cttgaggggcttcaccacctcccaggtgaagtcgg 171 ||||||||||||||||||||||||||||||||||| Sbjct: 224 cttgaggggcttcaccacctcccaggtgaagtcgg 190
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 124127 acttgaggggcttcaccacctcccaggtgaagtc 124094
>emb|Z26867.1|OSSAMS1 O.sativa (pRSAM-1) gene for S-adenosyl methionine synthetase Length = 2183 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 1958 acttgaggggcttcaccacctcccaggtgaagtc 1925
>emb|AJ296743.1|OSA296743 Oryza sativa mRNA for S-adenosylmethionine synthetase (SAMS gene) Length = 1594 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 1278 acttgaggggcttcaccacctcccaggtgaagtc 1245
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 2031250 acttgaggggcttcaccacctcccaggtgaagtc 2031217
>dbj|AK104875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D12, full insert sequence Length = 1487 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 1186 acttgaggggcttcaccacctcccaggtgaagtc 1153
>dbj|AK103157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A17, full insert sequence Length = 1586 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 1289 acttgaggggcttcaccacctcccaggtgaagtc 1256
>dbj|AK072051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H09, full insert sequence Length = 1555 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||||||||||||||||| Sbjct: 1289 acttgaggggcttcaccacctcccaggtgaagtc 1256
>gb|M73430.1|POPSAMPDPT Populus x generosa tissue-type leaf S-adenosyl methionine synthetase mRNA, complete cds Length = 1437 Score = 63.9 bits (32), Expect = 1e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtcgg 171 ||||||||||||||||||||||||| |||||||||| Sbjct: 1224 acttgaggggcttcaccacctcccatgtgaagtcgg 1189
>gb|AF420238.1|AF420238 Dendrobium crumenatum S-adenosyl-L-methionine synthetase (Sams) mRNA, complete cds Length = 1566 Score = 61.9 bits (31), Expect = 6e-07 Identities = 31/31 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||||||||||||||||||||||||||| Sbjct: 1241 acttgaggggcttcaccacctcccaggtgaa 1211
>ref|NM_183624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||| ||||||||||||||||||||||| Sbjct: 1171 acttgaggggtttcaccacctcccaggtgaagtc 1138
>gb|BT018468.1| Zea mays clone EL01N0419H05.d mRNA sequence Length = 1498 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||||||||||||||||||||| Sbjct: 1236 acttgagtggcttcaccacctcccaggtgaagtc 1203
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||| ||||||||||||||||||||||| Sbjct: 10655887 acttgaggggtttcaccacctcccaggtgaagtc 10655920
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||| ||||||||||||||||||||||| Sbjct: 150510 acttgaggggtttcaccacctcccaggtgaagtc 150543
>gb|AY583461.1| Daucus carota S-adenosyl-L-methionine synthetase 1 (SAMS1) mRNA, complete cds Length = 1497 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||||||||||||||||||||| |||||||| Sbjct: 1322 acttgaggggcttcaccacctcccaagtgaagtc 1289
>emb|AM039896.1| Hordeum vulgare mRNA for putative AdoMet synthase 4 (sam4 gene) Length = 1546 Score = 60.0 bits (30), Expect = 2e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||| ||||||||||||||||| Sbjct: 1245 acttgaggggcttcacaacctcccaggtgaagtc 1212
>gb|AY109333.1| Zea mays CL2757_5 mRNA sequence Length = 1912 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 141 aggggcttcaccacctcccaggtgaagtcggc 172 |||||||| ||||||||||||||||||||||| Sbjct: 455 aggggcttgaccacctcccaggtgaagtcggc 486
>gb|U79767.1|MCU79767 Mesembryanthemum crystallinum methionine adenosyltransferase mRNA, complete cds Length = 1628 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 138 ttgaggggcttcaccacctcccaggtgaagtc 169 ||||||||||||||||||||||| |||||||| Sbjct: 1225 ttgaggggcttcaccacctcccatgtgaagtc 1194
>gb|AF271220.1| Brassica juncea S-adenosylmethionine synthetase gene, complete cds Length = 4459 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtcggcat 174 ||||||| |||||||| ||||||||||||||||| |||| Sbjct: 3436 acttgagtggcttcacaacctcccaggtgaagtcagcat 3398
>ref|NM_116415.2| Arabidopsis thaliana ATP binding / methionine adenosyltransferase AT4G01850 mRNA, complete cds Length = 1479 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1258 acttgagtggcttcacgacctcccaggtgaagtc 1225
>gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM, complete sequence Length = 120185 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 39834 acttgagtggcttcacgacctcccaggtgaagtc 39867
>gb|BT000575.1| Arabidopsis thaliana S-adenosylmethionine synthase 2 (At4g01850/T7B11_11) mRNA, complete cds Length = 1182 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1162 acttgagtggcttcacgacctcccaggtgaagtc 1129
>emb|X80362.1|BJMSAMS B.juncea msams mRNA Length = 1474 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1261 acttgagtggcttcacgacctcccaggtgaagtc 1228
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 25187 acttgagtggcttcacgacctcccaggtgaagtc 25220
>gb|AY094454.1| Arabidopsis thaliana AT4g01850/T7B11_11 mRNA, complete cds Length = 1387 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1253 acttgagtggcttcacgacctcccaggtgaagtc 1220
>gb|AY072327.1| Arabidopsis thaliana S-adenosylmethionine synthase 2 (At4g01850; T7B11.11) mRNA, complete cds Length = 1438 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1253 acttgagtggcttcacgacctcccaggtgaagtc 1220
>gb|AF379015.1|AF379015 Brassica juncea clone MSAMS5 S-adenosylmethionine synthetase (MSAMS) mRNA, complete cds Length = 1429 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1258 acttgagtggcttcacgacctcccaggtgaagtc 1225
>dbj|AB221009.1| Beta vulgaris BvSAMS1 mRNA for S-adenosyl-L-methionine synthetase, complete cds Length = 1720 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||| |||||||| |||||||| Sbjct: 1299 acttgaggggcttcacaacctcccatgtgaagtc 1266
>gb|AY089126.1| Arabidopsis thaliana clone 36518 mRNA, complete sequence Length = 1395 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1256 acttgagtggcttcacgacctcccaggtgaagtc 1223
>gb|AF379013.1| Brassica juncea clone MSAMS3 S-adenosylmethionine synthetase (MSAMS) mRNA, complete cds Length = 1459 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1270 acttgagtggcttcacgacctcccaggtgaagtc 1237
>gb|AY567973.1| Brassica rapa subsp. pekinensis cultivar Seoul S-adenosyl-L-methionine synthetase (SAMS) mRNA, complete cds Length = 1182 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1162 acttgagtggcttcacgacctcccaggtgaagtc 1129
>gb|M33217.1|ATHSAM2 A.thaliana S-adenosylmethionine synthetase 2 (sam-2) gene, complete cds Length = 2401 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| ||||||||||||||||| Sbjct: 1908 acttgagtggcttcacgacctcccaggtgaagtc 1875
>gb|U17241.1|ACU17241 Actinidia chinensis S-adenosylmethionine synthetase mRNA, partial cds Length = 1272 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Minus Query: 141 aggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||||||| |||||||| Sbjct: 1059 aggggcttcaccacctcccatgtgaagtc 1031
>gb|AY259227.1| Litchi chinensis S-adenosylmethionine synthetase (SAMS) mRNA, complete cds Length = 1515 Score = 46.1 bits (23), Expect = 0.035 Identities = 38/43 (88%) Strand = Plus / Minus Query: 127 ccttgtcgaacttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| ||||||| ||||| ||||||||||| |||||||| Sbjct: 1240 ccttgtcccacttgagtggcttgaccacctcccatgtgaagtc 1198
>gb|AY583462.1| Daucus carota S-adenosyl-L-methionine synthetase 2 (SAMS2) mRNA, complete cds Length = 1207 Score = 46.1 bits (23), Expect = 0.035 Identities = 29/31 (93%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||||||||| || |||||||||||||| Sbjct: 1167 acttgaggggcttgactacctcccaggtgaa 1137
>gb|AF004317.1|AF004317 Musa acuminata S-adenosyl-L-methionine synthetase homolog mRNA, complete cds Length = 1547 Score = 46.1 bits (23), Expect = 0.035 Identities = 32/35 (91%) Strand = Plus / Minus Query: 135 aacttgaggggcttcaccacctcccaggtgaagtc 169 |||| ||||||||| || ||||||||||||||||| Sbjct: 1268 aactcgaggggcttgactacctcccaggtgaagtc 1234
>gb|DQ455588.1| Phaseolus vulgaris S-adenosyl-L-methionine synthetase mRNA, partial cds Length = 480 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| ||||||||||| ||||| |||||||| Sbjct: 463 acttgagtggcttcaccacttcccatgtgaagtc 430
>gb|AY325308.1| Brassica oleracea var. capitata putative S-adenosylmethionine synthetase mRNA, partial cds Length = 1311 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| |||||||||||||||| Sbjct: 1081 acttgagtggcttcacgccctcccaggtgaagtc 1048
>gb|AF346305.1|AF346305 Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS1) mRNA, complete cds Length = 1572 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||||| | |||||| |||||||| Sbjct: 1244 acttgaggggcttcacaatctcccatgtgaagtc 1211
>dbj|AB221010.1| Beta vulgaris BvSAMS2 mRNA for S-adenosyl-L-methionine synthetase, complete cds Length = 1570 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 |||| |||||||| || ||||||||||||||||| Sbjct: 1224 acttcaggggcttgacgacctcccaggtgaagtc 1191
>dbj|AP004964.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20J05, TM0143a, complete sequence Length = 7894 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaagtc 169 ||||||| |||||||| || |||||||||||||| Sbjct: 1447 acttgagtggcttcacaacttcccaggtgaagtc 1414
>gb|AC146436.4| Pan troglodytes BAC clone RP43-16B7 from 7, complete sequence Length = 154982 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ggcagcagaccaagaataacc 96 ||||||||||||||||||||| Sbjct: 71561 ggcagcagaccaagaataacc 71581
>gb|AC002528.1|AC002528 Human BAC clone GS1-542D18 from 7q31-q32, complete sequence Length = 141120 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 ggcagcagaccaagaataacc 96 ||||||||||||||||||||| Sbjct: 118157 ggcagcagaccaagaataacc 118177
>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226269 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 gatgtcttcttcttaggcagatgc 127 |||||||||| ||||||||||||| Sbjct: 31302 gatgtcttctccttaggcagatgc 31325
>ref|XM_381687.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01511.1) partial mRNA Length = 1386 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggagccaaaggattgttgaa 68 |||||||||||||||||||| Sbjct: 1007 ggagccaaaggattgttgaa 988
>gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome 6, complete sequence Length = 187752 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 gatgtcttcttcttaggcagatgc 127 |||||||||| ||||||||||||| Sbjct: 116122 gatgtcttctccttaggcagatgc 116145
>gb|AY236337.1| Salvia miltiorrhiza S-adenosylmethionine synthetase mRNA, partial cds Length = 567 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 138 ttgaggggcttcaccacctcccaggtgaagtc 169 ||||||||||| || |||||||| |||||||| Sbjct: 545 ttgaggggcttgacaacctcccaagtgaagtc 514
>gb|AF346306.1|AF346306 Elaeagnus umbellata S-adenosyl-L-methionine synthetase (SAMS2) mRNA, complete cds Length = 1627 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 138 ttgaggggcttcaccacctcccaggtgaagtc 169 |||||||||||||| | |||||| |||||||| Sbjct: 1269 ttgaggggcttcacaatctcccatgtgaagtc 1238
>gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete sequence Length = 206383 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gatgtcttcttcttaggcagatgc 127 |||||||||| ||||||||||||| Sbjct: 6636 gatgtcttctccttaggcagatgc 6613
>emb|AL935268.6| Zebrafish DNA sequence from clone CH211-199H23 in linkage group 12, complete sequence Length = 206438 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 agcagaccaagaataacccc 98 |||||||||||||||||||| Sbjct: 162038 agcagaccaagaataacccc 162019
>ref|NM_112617.2| Arabidopsis thaliana unknown protein AT3G17380 mRNA, complete cds Length = 2539 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Plus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1350 acttgagtggcttgactacctcccaggtgaa 1380
>ref|NM_112618.2| Arabidopsis thaliana MTO3; methionine adenosyltransferase AT3G17390 (MTO3) mRNA, complete cds Length = 1688 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1371 acttgagtggcttgactacctcccaggtgaa 1341
>gb|AY376688.1| Crinipellis perniciosa mitochondrion, complete genome Length = 109103 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 atgcttcttcttacttccc 47 ||||||||||||||||||| Sbjct: 14075 atgcttcttcttacttccc 14057
>gb|AY560003.1| Medicago sativa S-adenosylmethionine synthase mRNA, complete cds Length = 1173 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 144 ggcttcaccacctcccaggtgaagtcggcat 174 ||||||||||| ||||| |||||||| |||| Sbjct: 1154 ggcttcaccacttcccatgtgaagtcagcat 1124
>ref|NM_001033839.1| Ciona intestinalis complement factor B-2 (bf-2), mRNA Length = 2997 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 599 acttgaggggcttcaccac 581
>gb|AF231655.1| Strongylura timucu clone HB-191 cytochrome b oxidase (Cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 800 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 tgaactagagtggcagcag 83 ||||||||||||||||||| Sbjct: 587 tgaactagagtggcagcag 569
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 agaccaagaataaccccac 100 ||||||||||||||||||| Sbjct: 1752100 agaccaagaataaccccac 1752082
>ref|NM_001032801.1| Ciona intestinalis complement factor B-1 (Bf-1), mRNA Length = 3614 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 602 acttgaggggcttcaccac 584
>ref|NM_001032802.1| Ciona intestinalis complement factor B-3 (Bf-3), mRNA Length = 3041 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 581 acttgaggggcttcaccac 563
>gb|AF131215.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTC-306G11, complete sequence; and clones CTC-493P15, CTB-91N18, CTC-164D9, partial sequence Length = 186607 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 93 aaccccactgtgatgtcttcttc 115 |||||||||||||||||| |||| Sbjct: 184249 aaccccactgtgatgtctccttc 184271
>gb|AC009296.2| Homo sapiens PAC clone RP5-1157F16 from 7, complete sequence Length = 33223 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 127 ccttgtcgaacttgaggggcttc 149 ||||||||| ||||||||||||| Sbjct: 11759 ccttgtcgagcttgaggggcttc 11737
>gb|AC145394.1| Pan troglodytes BAC clone RP43-83L19 from 7, complete sequence Length = 144147 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 127 ccttgtcgaacttgaggggcttc 149 ||||||||| ||||||||||||| Sbjct: 74867 ccttgtcgagcttgaggggcttc 74845
>gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence Length = 140345 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 accaagaataaccccactg 102 ||||||||||||||||||| Sbjct: 80225 accaagaataaccccactg 80207
>emb|AL357057.19| Human DNA sequence from clone RP11-802N13 on chromosome 6 Contains part of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 58133 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 29 atgcttcttcttacttcccaggagcca 55 ||||||||||||| ||||||| ||||| Sbjct: 39086 atgcttcttcttatttcccagaagcca 39112
>gb|BT000712.1| Arabidopsis thaliana clone RAFL09-90-M19 (R19828) putative s-adenosylmethionine synthetase (At3g17390) mRNA, complete cds Length = 1465 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1246 acttgagtggcttgactacctcccaggtgaa 1216
>gb|AF531479.1| Carica papaya S-adenosylmethionine synthase (SAMS) mRNA, complete cds Length = 1886 Score = 38.2 bits (19), Expect = 8.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 143 gggcttcaccacctcccaggtgaagtc 169 ||||||||| || |||||||||||||| Sbjct: 1588 gggcttcacgacttcccaggtgaagtc 1562
>emb|AJ277206.1|CSI277206 Camellia sinensis gene for s-adenosylmethinonine synthetase Length = 1776 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 1275 acttgaggggcttcaccac 1257
>gb|AF186099.1| Strongylura timucu isolate 4b cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 660 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 tgaactagagtggcagcag 83 ||||||||||||||||||| Sbjct: 482 tgaactagagtggcagcag 464
>gb|AC090048.7| Homo sapiens 12 BAC RP11-548L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 49160 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 72 gagtggcagcagaccaagaataa 94 ||||||||||||||| ||||||| Sbjct: 2860 gagtggcagcagacccagaataa 2838
>gb|AY120708.1| Arabidopsis thaliana putative S-adenosylmethionine synthetase (At3g17390) mRNA, complete cds Length = 1473 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1246 acttgagtggcttgactacctcccaggtgaa 1216
>gb|AC174352.7| Medicago truncatula clone mth2-7o1, complete sequence Length = 121626 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Plus Query: 144 ggcttcaccacctcccaggtgaagtcggcat 174 ||||||||||| ||||| |||||||| |||| Sbjct: 107985 ggcttcaccacttcccatgtgaagtcagcat 108015
>gb|AF243863.1| Strongylura timucu isolate N4b cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 541 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 tgaactagagtggcagcag 83 ||||||||||||||||||| Sbjct: 464 tgaactagagtggcagcag 446
>gb|AC118550.2| Homo sapiens chromosome 1 clone RP11-76L19, complete sequence Length = 43131 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 ccaagaataaccccactgt 103 ||||||||||||||||||| Sbjct: 21687 ccaagaataaccccactgt 21705
>gb|AC026523.9| Homo sapiens chromosome 15, clone RP11-461F11, complete sequence Length = 175770 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 112 cttcttaggcagatgcctt 130 ||||||||||||||||||| Sbjct: 81975 cttcttaggcagatgcctt 81993
>gb|AY037214.1| Arabidopsis thaliana AT3g17390/MGD8_20 mRNA, complete cds Length = 1510 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1248 acttgagtggcttgactacctcccaggtgaa 1218
>emb|BX823645.1|CNS0A7V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1231 acttgagtggcttgactacctcccaggtgaa 1201
>gb|AC156366.3| Bos taurus clone RP42-304J18, complete sequence Length = 91721 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 agaccaagaataaccccac 100 ||||||||||||||||||| Sbjct: 67837 agaccaagaataaccccac 67819
>gb|AY826834.1| Isochrysis galbana clone ISAP1 ascorbate peroxidase mRNA, partial cds Length = 1123 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 129 ttgtcgaacttgaggggct 147 ||||||||||||||||||| Sbjct: 566 ttgtcgaacttgaggggct 548
>dbj|AB180046.1| Ciona intestinalis CiBf-3 mRNA for complement factor B-3, complete cds Length = 3041 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 581 acttgaggggcttcaccac 563
>dbj|AB180045.1| Ciona intestinalis CiBf-2 mRNA for complement factor B-2, complete cds Length = 2997 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 599 acttgaggggcttcaccac 581
>dbj|AB180044.1| Ciona intestinalis CiBf-1 mRNA for complement factor B-1, complete cds Length = 3614 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 602 acttgaggggcttcaccac 584
>gb|AY087184.1| Arabidopsis thaliana clone 326 mRNA, complete sequence Length = 1508 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1251 acttgagtggcttgactacctcccaggtgaa 1221
>gb|BT002665.1| Arabidopsis thaliana At3g17390/MGD8_20 gene, complete cds Length = 1182 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 1162 acttgagtggcttgactacctcccaggtgaa 1132
>gb|AC100809.9| Homo sapiens chromosome 8, clone CTC-493P15, complete sequence Length = 184851 Score = 38.2 bits (19), Expect = 8.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 aaccccactgtgatgtcttcttc 115 |||||||||||||||||| |||| Sbjct: 74399 aaccccactgtgatgtctccttc 74377
>emb|AL929126.25| Mouse DNA sequence from clone RP23-424N5 on chromosome 2, complete sequence Length = 151556 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 144 ggcttcaccacctcccagg 162 ||||||||||||||||||| Sbjct: 90850 ggcttcaccacctcccagg 90868
>emb|AL929061.31| Mouse DNA sequence from clone RP23-402A18 on chromosome X, complete sequence Length = 146071 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 aactagagtggcagcagac 85 ||||||||||||||||||| Sbjct: 33087 aactagagtggcagcagac 33105
>dbj|AB022216.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8 Length = 80167 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Plus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||| ||||| || |||||||||||||| Sbjct: 73453 acttgagtggcttgactacctcccaggtgaa 73483
>dbj|AK112764.1| Ciona intestinalis cDNA, clone:cieg055i24, full insert sequence Length = 3210 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 228 acttgaggggcttcaccac 210
>dbj|AB041534.1| Camellia sinensis SAM mRNA for s-adenosylmethionine synthetase, complete cds Length = 1303 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccac 154 ||||||||||||||||||| Sbjct: 1170 acttgaggggcttcaccac 1152
>dbj|AB062358.1| Phaseolus lunatus SAMS mRNA for S-adenosylmethionine synthetase, complete cds Length = 1659 Score = 38.2 bits (19), Expect = 8.5 Identities = 28/31 (90%) Strand = Plus / Minus Query: 136 acttgaggggcttcaccacctcccaggtgaa 166 ||||||||||||| ||||| ||||| ||||| Sbjct: 1411 acttgaggggcttgaccacttcccatgtgaa 1381
>emb|AL358774.9| Mouse DNA sequence from clone RP21-463A3 on chromosome X, complete sequence Length = 36971 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 aactagagtggcagcagac 85 ||||||||||||||||||| Sbjct: 8189 aactagagtggcagcagac 8207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,526,026 Number of Sequences: 3902068 Number of extensions: 1526026 Number of successful extensions: 159174 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158969 Number of HSP's gapped (non-prelim): 201 length of query: 174 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 152 effective length of database: 17,147,199,772 effective search space: 2606374365344 effective search space used: 2606374365344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)