ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63e18 |
|---|---|
| Clone Library Name | barley_pub |
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 277 bits (708), Expect = 1e-74 Identities = 135/135 (100%), Positives = 135/135 (100%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE Sbjct: 291 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG Sbjct: 351 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 410 Query: 169 QANDDAMKTGAFYGK 125 QANDDAMKTGAFYGK Sbjct: 411 QANDDAMKTGAFYGK 425
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 244 bits (622), Expect = 1e-64 Identities = 113/135 (83%), Positives = 127/135 (94%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG Sbjct: 294 YWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGS 353 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG Sbjct: 354 TGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALG 413 Query: 169 QANDDAMKTGAFYGK 125 AN DAMKTG+FYGK Sbjct: 414 DANQDAMKTGSFYGK 428
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 243 bits (619), Expect = 3e-64 Identities = 113/134 (84%), Positives = 127/134 (94%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTR+DR+GVCKGIFRTDNVPDE +V++VD+FPGQSIDFFGALRARVYDDEVRKWV + Sbjct: 294 YWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSD 353 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 GVENI KRLVNSREGPP F+QPKMTIEKL+EYG+MLV+EQENVKRVQLA++YLSEAALG Sbjct: 354 TGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALG 413 Query: 169 QANDDAMKTGAFYG 128 AN DAMKTG+FYG Sbjct: 414 DANSDAMKTGSFYG 427
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 239 bits (609), Expect = 4e-63 Identities = 112/133 (84%), Positives = 127/133 (95%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTD V +E VV+LVDTFPGQSIDFFGALRARVYDDEVR+WV E Sbjct: 300 YWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSE 359 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 GVENI+++LVNS+EGPPTF+QPK+TIEKL+EYGHMLV EQENVKRVQLADKYL+EAALG Sbjct: 360 TGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALG 419 Query: 169 QANDDAMKTGAFY 131 +AN+DAMKTG+F+ Sbjct: 420 EANEDAMKTGSFF 432
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 234 bits (597), Expect = 1e-61 Identities = 111/134 (82%), Positives = 123/134 (91%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVC GIFR+DNV E +V+LVDTFPGQSIDFFGALRARVYDDEVRKW+ Sbjct: 304 YWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITG 363 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GV++I K+LVNS+EGPPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYLSEAALG Sbjct: 364 VGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALG 423 Query: 169 QANDDAMKTGAFYG 128 AN DAM TG FYG Sbjct: 424 DANSDAMNTGTFYG 437
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 232 bits (592), Expect = 4e-61 Identities = 109/134 (81%), Positives = 123/134 (91%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTDNV D+ +V+LVDTFPGQSIDFFGALRARVY DEVRKWV E Sbjct: 304 YWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSE 363 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GV+ I K+LVNS+EGPP+F+QPKMTI+KL+ YG MLVQEQENVKRVQLADKY+SEAALG Sbjct: 364 VGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALG 423 Query: 169 QANDDAMKTGAFYG 128 AN+DA+K G FYG Sbjct: 424 DANNDAIKRGTFYG 437
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 232 bits (591), Expect = 5e-61 Identities = 107/132 (81%), Positives = 123/132 (93%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTDNVP+E +V++VD FPGQSIDFFGALRARVYDDEVRKWV E Sbjct: 304 YWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSE 363 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GV+ I K+LVNS+EGPPTF+QPKMTI+KL++YG+MLV+EQENVKRVQLADKY+SEAALG Sbjct: 364 VGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALG 423 Query: 169 QANDDAMKTGAF 134 AN DA+K G F Sbjct: 424 DANQDAIKRGTF 435
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 227 bits (579), Expect = 1e-59 Identities = 102/133 (76%), Positives = 124/133 (93%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTR+DR+GVCKGIFRTD VP+E + +LVDTFPGQSIDFFGALRARVYDDEVRKW+ Sbjct: 306 YWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISG 365 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GV+ K+LVNS+EGPPTFDQPKM+++KL++YG+MLVQEQENVKRVQLADKYL+EAALG Sbjct: 366 VGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALG 425 Query: 169 QANDDAMKTGAFY 131 AN+DA+K+G+F+ Sbjct: 426 NANEDAIKSGSFF 438
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 224 bits (570), Expect = 1e-58 Identities = 105/130 (80%), Positives = 120/130 (92%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTDNVP+EAVV++VD+FPGQSIDFFGALRARVYDDEVRKWV Sbjct: 303 YWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSG 362 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 G+E I ++L+NSR+GPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL EAALG Sbjct: 363 TGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALG 422 Query: 169 QANDDAMKTG 140 AN DA+ TG Sbjct: 423 DANADAINTG 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 223 bits (569), Expect = 2e-58 Identities = 105/132 (79%), Positives = 119/132 (90%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTDNVP+EAV+++VDTFPGQSIDFFGALRARVYDDEVRKWV Sbjct: 308 YWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSG 367 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 G+E I +L+NS +GPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL EAALG Sbjct: 368 TGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALG 427 Query: 169 QANDDAMKTGAF 134 AN DA+ TG F Sbjct: 428 DANADAINTGNF 439
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 221 bits (563), Expect = 1e-57 Identities = 105/133 (78%), Positives = 117/133 (87%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVC GIFRTDNVP E VV++VD FPGQSIDFFGALRARVYDDEVRKWV Sbjct: 308 YWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSG 367 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 G+E I +L+NS +GPPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYL EAALG Sbjct: 368 TGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALG 427 Query: 169 QANDDAMKTGAFY 131 AN DA+ G+F+ Sbjct: 428 DANADAINNGSFF 440
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 221 bits (563), Expect = 1e-57 Identities = 102/135 (75%), Positives = 119/135 (88%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVC GIF+TD VP E VV+LVD FPGQSIDFFGALRARVY DEVRKWV Sbjct: 302 YWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNS 361 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GV+N+ K+LVNS++GPP F+QP+MT++KLMEYG+MLVQEQENVKRVQLAD+Y+S AALG Sbjct: 362 VGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALG 421 Query: 169 QANDDAMKTGAFYGK 125 AN DA+ G F+GK Sbjct: 422 DANKDAIDRGTFFGK 436
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 221 bits (562), Expect = 1e-57 Identities = 101/133 (75%), Positives = 121/133 (90%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTD VP++ +V LVD PGQSIDFFGALRARVYDDEVRKW+ Sbjct: 308 YWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISG 367 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GV+++ K+LVNS+EGPPTFDQPKMT++KL+ Y MLVQEQENVKRVQLAD+YL+EAALG Sbjct: 368 VGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALG 427 Query: 169 QANDDAMKTGAFY 131 AN+DA+K+G+F+ Sbjct: 428 NANEDAIKSGSFF 440
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 221 bits (562), Expect = 1e-57 Identities = 107/135 (79%), Positives = 117/135 (86%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIGVCKGIFRTD + DE +V LVD FPGQSIDFFGALRARVYDDEVRK+V Sbjct: 304 YWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVES 363 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALG 170 +GVE I KRLVNSREGPP F+QP+MT EKLMEYG+MLV EQENVKRVQLA+ YLS+AALG Sbjct: 364 LGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALG 423 Query: 169 QANDDAMKTGAFYGK 125 AN DA+ G FYGK Sbjct: 424 DANADAIGRGTFYGK 438
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 187 bits (476), Expect = 1e-47 Identities = 88/109 (80%), Positives = 97/109 (88%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YWAPTREDRIG+C GIFRTD VP E +V+LVDTFPGQSIDFFGALRARVYDDEVRKW Sbjct: 301 YWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVG 360 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQL 203 +GVE I + LVNS+E PPTFDQPKMTIEKL+EYG+MLV EQENVKRV+L Sbjct: 361 VGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 147 bits (371), Expect = 2e-35 Identities = 75/119 (63%), Positives = 88/119 (73%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YW PTREDRIGVC GIF+ DNV V LVDTFPGQSIDFFGALRARVYDD VR+W+ + Sbjct: 277 YWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITD 336 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAAL 173 GV+ I ++LVN+R+ + M + L++YG LV EQENVKRVQLAD YLS A L Sbjct: 337 TGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 122 bits (307), Expect = 5e-28 Identities = 52/113 (46%), Positives = 80/113 (70%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YW P R++++G+ GIF D + V +LVD+FP QSIDFF ALR+R+YD+++R ++ + Sbjct: 177 YWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQ 236 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 191 +G EN+S R+VNS EGPP F +P T+ L+E + +V EQ+ ++ QL D+Y Sbjct: 237 VGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 118 bits (295), Expect = 1e-26 Identities = 52/113 (46%), Positives = 78/113 (69%) Frame = -1 Query: 529 YWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 YW P R+D++G+ GIF D + + +LVDTFP QSIDFF ALR+R+YD ++R ++ + Sbjct: 177 YWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHK 236 Query: 349 IGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 191 +G E IS R+VNS E PP F +P ++ L+E G++++ EQ+ V QL D+Y Sbjct: 237 VGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 51.6 bits (122), Expect = 1e-06 Identities = 30/60 (50%), Positives = 31/60 (51%) Frame = -1 Query: 442 LVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 263 LVDTFPGQSIDFFGAL REGPPTF+QP MTIEK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 32.7 bits (73), Expect = 0.63 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 329 QAPRQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 186 QAPRQ + A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 32.7 bits (73), Expect = 0.63 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 329 QAPRQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 186 QAPRQ + A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson| protein) (D-ash) Length = 1620 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = -2 Query: 429 SRGSPSTSSARCGHGCTTTRCASGSARSA 343 S +PSTS G G TTT ASG A S+ Sbjct: 647 SSSAPSTSGVATGGGATTTTAASGCASSS 675
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.4 bits (67), Expect = 3.1 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 309 GH PH + PG G G + GH P H + Sbjct: 751 GHRPH-EGPGGGMGNSSGHRPHEGPGSGMGSGHRPHEGPGSSMGGGGGHRPHEGPGGGIS 809 Query: 308 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 147 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 810 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 864 Score = 30.0 bits (66), Expect = 4.1 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 309 GH PH + PG G G GGH P + P Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 840 Query: 308 GGAAHVRPAQDD-HREAHGVRPHAGPG 231 GG+ RP + H HG RPH PG Sbjct: 841 GGSGGHRPHEGPGHGGPHGHRPHDVPG 867
>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA| Length = 653 Score = 30.4 bits (67), Expect = 3.1 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = -3 Query: 320 RQLEGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHED 144 R EG + R DDHR+ H R GPG + P RG P+ R + D Sbjct: 125 RGREGYEGYGRHRADDHRQGHNDRHQGGPG---------DQLPPSRGDQLPTARPAYPD 174
>IF2_TROWT (Q83GT8) Translation initiation factor IF-2| Length = 803 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 515 PRGPHRRVQGHLPHRQRPGRGRGEAG 438 P HRRV LP ++ P RGRG G Sbjct: 144 PASTHRRVPAPLPQKRTPLRGRGAPG 169
>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2| Length = 803 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -3 Query: 515 PRGPHRRVQGHLPHRQRPGRGRGEAG 438 P HRRV LP ++ P RGRG G Sbjct: 144 PASTHRRVPAPLPQKRTPLRGRGAPG 169
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 30.0 bits (66), Expect = 4.1 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 309 GH PH + PG G G GGH P + P Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839 Query: 308 GGAAHVRPAQDD-HREAHGVRPHAGPG 231 GG+ RP + H HG RPH PG Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866 Score = 28.9 bits (63), Expect = 9.1 Identities = 30/117 (25%), Positives = 35/117 (29%), Gaps = 3/117 (2%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 309 GH PH + PG G G GH P H + Sbjct: 750 GHRPH-EGPGGGMGNNSGHRPHEGPGGGMGSGHRPHEGPAGSMGGGGGHRPHEGPGGGIS 808 Query: 308 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 147 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 809 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 863
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 30.0 bits (66), Expect = 4.1 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 309 GH PH + PG G G GGH P + P Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839 Query: 308 GGAAHVRPAQDD-HREAHGVRPHAGPG 231 GG+ RP + H HG RPH PG Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866 Score = 29.6 bits (65), Expect = 5.3 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLE 309 GH PH + PG G G + GH P H + Sbjct: 750 GHRPH-EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGIS 808 Query: 308 GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 147 GG+ H RP + G RPH GPG G R G P R H+ Sbjct: 809 GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 863
>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)| Length = 4639 Score = 29.3 bits (64), Expect = 7.0 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -1 Query: 499 GVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGE 350 G+C+ I D++P E +VRL + +++ F + R+ DD R+W E Sbjct: 2790 GICEAIRPLDSLPVEGLVRL---WAHEALRLF---QDRLVDDSERRWTNE 2833
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.3 bits (64), Expect = 7.0 Identities = 29/92 (31%), Positives = 31/92 (33%), Gaps = 4/92 (4%) Frame = -3 Query: 488 GHLPHRQRPGRGRGEAGGHLP--GAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQ 315 GH PH + PG G G GGH P G H G H P Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPHEGPGH-----------------------GGPHGHRPHD 848 Query: 314 LEGGAAHVRPAQDDHR--EAHGVRPHAGPGAG 225 + G H DHR H R H GPG G Sbjct: 849 VPGHRGH------DHRGPPPHEHRGHDGPGHG 874 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,794,307 Number of Sequences: 219361 Number of extensions: 1274924 Number of successful extensions: 4729 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4458 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4714 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
