Clone Name | rbah62p10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FIBP_ADE07 (P15141) Fiber protein (pIV) | 30 | 3.2 | 2 | ADY4_YEAST (Q05955) Accumulates dyads protein 4 | 29 | 4.2 |
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>FIBP_ADE07 (P15141) Fiber protein (pIV)| Length = 343 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 245 NYYSSSCYVVKKDHSVFPIDL 307 NY +CY DH+ FPID+ Sbjct: 271 NYIYGTCYYTASDHTAFPIDI 291
>ADY4_YEAST (Q05955) Accumulates dyads protein 4| Length = 493 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 135 NECKKNLLIHHHQTHQPRFPRIVNSKQET 221 N+C ++L +H +T+Q R PRI+ K +T Sbjct: 414 NDCSESLDDYHPRTYQFRHPRIIIDKMKT 442 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,939,075 Number of Sequences: 219361 Number of extensions: 550186 Number of successful extensions: 893 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 872 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 890 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)