ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63e17 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 94.4 bits (233), Expect = 6e-20 Identities = 44/44 (100%), Positives = 44/44 (100%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ 275 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ Sbjct: 281 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ 324
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 72.4 bits (176), Expect = 2e-13 Identities = 33/43 (76%), Positives = 36/43 (83%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 278 EAVNVSL NLLTYPFV+EGV GTL L GG+YDFV+G FE WE Sbjct: 206 EAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWE 248
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 69.3 bits (168), Expect = 2e-12 Identities = 31/42 (73%), Positives = 35/42 (83%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 276 EAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 317
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 69.3 bits (168), Expect = 2e-12 Identities = 31/42 (73%), Positives = 35/42 (83%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 277 EAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 318
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 69.3 bits (168), Expect = 2e-12 Identities = 31/42 (73%), Positives = 35/42 (83%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 277 EAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 318
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 68.6 bits (166), Expect = 3e-12 Identities = 31/42 (73%), Positives = 35/42 (83%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 277 EAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELW 318
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 68.6 bits (166), Expect = 3e-12 Identities = 31/42 (73%), Positives = 34/42 (80%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV+EG+ GTL L GG+YDFV G FE W Sbjct: 283 EAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELW 324
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 67.4 bits (163), Expect = 8e-12 Identities = 31/42 (73%), Positives = 34/42 (80%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV+EG+ TL L GGHYDFV+G FE W Sbjct: 268 EAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELW 309
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 66.2 bits (160), Expect = 2e-11 Identities = 30/42 (71%), Positives = 33/42 (78%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVN SL NLLTYPFV+EG+ N TL L GG+YDFV G FE W Sbjct: 275 EAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELW 316
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 64.7 bits (156), Expect = 5e-11 Identities = 29/42 (69%), Positives = 34/42 (80%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV++G+ TL L GG+YDFV+G FE W Sbjct: 266 EAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELW 307
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 61.2 bits (147), Expect = 6e-10 Identities = 27/42 (64%), Positives = 32/42 (76%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 281 EAVNVSL NLLTYPFV++ + N L L G HYDFV+G F+ W Sbjct: 137 EAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLW 178
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 35.8 bits (81), Expect = 0.025 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Frame = -1 Query: 406 EAVNVSLQ--NLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 293 E +N LQ NLL+Y F++E V N LK+ G HY +G+ Sbjct: 155 ERLNARLQLNNLLSYDFIQERVINNELKIFGWHYIIETGR 194
>ACCD_PICAB (O47039) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 319 Score = 34.7 bits (78), Expect = 0.056 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +2 Query: 194 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 373 AL+ + D+ L+YV + S TGG + F + GD ++ G ++D+ +G Sbjct: 220 ALYIPQKDNRLLYVSILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKIVIDQTLG 276 Query: 374 QEVLE 388 Q+V+E Sbjct: 277 QKVIE 281
>ACCD_PINTH (P52769) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 321 Score = 34.3 bits (77), Expect = 0.073 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = +2 Query: 194 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 373 AL+ H+ + L+Y+ + S TGG + F + GD ++ G ++++ +G Sbjct: 220 ALYIHQKEKKLLYISILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKRVIEQTLG 276 Query: 374 QEVLE 388 Q+V+E Sbjct: 277 QKVIE 281
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 32.7 bits (73), Expect = 0.21 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = -1 Query: 406 EAVNVSLQ--NLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 293 E +N LQ NLL+Y F++E + LK+ G HY +G+ Sbjct: 155 ERLNARLQLNNLLSYDFIQEKASKNELKIFGWHYIIETGR 194
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 293 E V ++NL TYP V+ + G L++ G Y+ SG+ Sbjct: 153 ENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESGE 190
>PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 426 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 209 DVNAMPWECVPVIVQYWMPDGPM*ICHKQ 123 D A+PW +P I + PDGP+ I H + Sbjct: 154 DAPAVPWSTLPEIFRELSPDGPLTIFHPE 182
>I18BP_MOUSE (Q9Z0M9) Interleukin-18-binding protein precursor (IL-18BP)| (Interferon gamma-inducing factor-binding protein) Length = 191 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -2 Query: 219 SSDRCECNAMGVRTRYCPVLDAGWPDVNLP*AIEPFFLHHFLTRNCTA 76 S D C + V T+ P LD WP+ +P L+ LT +CTA Sbjct: 41 SKDPCSSWSPAVPTKQYPALDVIWPEKEVP-------LNGTLTLSCTA 81
>ACCD_CHLVU (P56293) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 411 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = +2 Query: 194 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 373 ALH H++ L+Y+ + S TGG + F + GD + L G G ++++ + Sbjct: 192 ALHIHQNCAKLLYISVLTSPTTGG---VTASFAMLGDLLFAEPKALIGFAGRRVIEQTLQ 248 Query: 374 QEV 382 +++ Sbjct: 249 EQL 251
>LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor| Length = 226 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -1 Query: 328 LVGGHYDFVSGKFETWEQ*IFPTG*LRHIQTYIYQDIVRSM 206 ++ G YD + TW + +FPTG Q Y+ Q + S+ Sbjct: 163 MIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSL 203
>RPOZ_VIBPA (Q87TB0) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP| omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) Length = 90 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 206 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADEL-EGSVGHTLLDERVGQEV 382 +R D +LI R TGG+D L+P E V+A E+ EG + +LD R QE Sbjct: 15 NRFDLVLIAARRARQMQTGGKDALVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72 Query: 383 LE 388 E Sbjct: 73 QE 74
>RPOZ_VIBVY (Q7MPX0) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP| omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) Length = 90 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 206 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADEL-EGSVGHTLLDERVGQEV 382 +R D +LI R TGG+D L+P E V+A E+ EG + +LD R QE Sbjct: 15 NRFDLVLIAARRARQMQTGGKDSLVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72 Query: 383 LE 388 E Sbjct: 73 QE 74
>RPOZ_VIBVU (Q8DDV5) DNA-directed RNA polymerase omega chain (EC 2.7.7.6) (RNAP| omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit) Length = 90 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 206 HRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADEL-EGSVGHTLLDERVGQEV 382 +R D +LI R TGG+D L+P E V+A E+ EG + +LD R QE Sbjct: 15 NRFDLVLIAARRARQMQTGGKDSLVP--EENDKPTVIALREIEEGLITKEVLDARERQEQ 72 Query: 383 LE 388 E Sbjct: 73 QE 74
>EF2_METKA (Q8TXJ4) Elongation factor 2 (EF-2) [Contains: Mka fusA intein]| Length = 1257 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 13/80 (16%) Frame = +2 Query: 200 HSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHT-------LL 358 H+ ++ +++ +L G ++ ELAGD++V+ DE+E G T ++ Sbjct: 545 HNFAAEGFVVHNTTLSDQLLAGAGMISE--ELAGDQLVLDFDEMEQERGITIDAANVSMV 602 Query: 359 DERVGQEVL------EGHVD 400 E G+E L GHVD Sbjct: 603 HEYEGEEYLINLIDTPGHVD 622
>ACCD_EPIVI (P30064) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 493 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/66 (25%), Positives = 33/66 (50%) Frame = +2 Query: 194 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 373 AL ++S+ L+YV + S TGG + F + GD ++ + G ++++ + Sbjct: 392 ALFDYQSNKKLLYVSILTSPTTGG---VTASFGMLGDIIIAEPNSYIAFAGKRVIEQTLH 448 Query: 374 QEVLEG 391 + V EG Sbjct: 449 KIVPEG 454
>NADA_LISIN (Q929Z0) Quinolinate synthetase A| Length = 366 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 263 GEDLLLPCFELAGDEVVVAADELEGSV 343 GEDL +PC DEVV AD + S+ Sbjct: 36 GEDLFIPCHHYQKDEVVPFADAIGDSL 62
>SCRA_LIMPO (Q25390) Alpha-scruin| Length = 918 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Frame = -3 Query: 233 HISRYRPI--DVNAMPWECVPVIVQYWMPD 150 +IS YRP+ D + + E VPV + +W PD Sbjct: 478 YISGYRPLPPDQDDLSKELVPVSIPFWPPD 507
>LPSBP_PERAM (P26305) Hemolymph lipopolysaccharide-binding protein precursor| (LPS-binding protein) (LPS-BP) Length = 256 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 388 LQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFET 284 LQNL + EG TN +G H FV G+F T Sbjct: 167 LQNLFSKVTKTEGATNNDYIFIGIHDRFVEGEFIT 201
>ACCD_CUSRE (P31562) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 497 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/63 (23%), Positives = 31/63 (49%) Frame = +2 Query: 194 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 373 AL+ ++S+ L+YV + S GG + F + GD ++V G ++++ + Sbjct: 379 ALYDYQSNKRLVYVSILTSPTAGG---VTASFGMLGDIIIVEPRAYVAFAGKRVIEQTLN 435 Query: 374 QEV 382 Q + Sbjct: 436 QTI 438
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 278 E V L NL T+P V+ + G + L G YD SG ++ Sbjct: 151 ENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAFD 193
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -1 Query: 406 EAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 278 E V L NL T+P V+ + G + L G YD SG ++ Sbjct: 151 ENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAFD 193
>KI2L1_HUMAN (P43626) Killer cell immunoglobulin-like receptor 2DL1 precursor| (MHC class I NK cell receptor) (Natural killer-associated transcript 1) (NKAT-1) (p58 natural killer cell receptor clones CL-42/47.11) (p58 NK receptor) (p58.1 MHC class-I-speci Length = 348 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -1 Query: 358 KEGVTNGTLKLVGGHYDFVS 299 +EG+ N TL+L+G H+D VS Sbjct: 62 REGMFNDTLRLIGEHHDGVS 81
>PE23_MYCTU (P0A684) Hypothetical PE family protein PE23| Length = 382 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -1 Query: 403 AVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSG 296 AVN ++LL +P E V N L GGH +G Sbjct: 102 AVNAPARSLLGHPSAAESVQNSAPTLGGGHSTVTAG 137
>PE23_MYCBO (P0A685) Hypothetical PE family protein PE23| Length = 382 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -1 Query: 403 AVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSG 296 AVN ++LL +P E V N L GGH +G Sbjct: 102 AVNAPARSLLGHPSAAESVQNSAPTLGGGHSTVTAG 137
>KI2S1_HUMAN (Q14954) Killer cell immunoglobulin-like receptor 2DS1 precursor| (MHC class I NK cell receptor Eb6 ActI) (CD158h antigen) Length = 304 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -1 Query: 358 KEGVTNGTLKLVGGHYDFVS 299 +EG+ N TL+L+G H+D VS Sbjct: 62 REGMFNDTLRLIGEHHDGVS 81
>VL1_HPV05 (P06917) Major capsid protein L1| Length = 516 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +3 Query: 81 YNSSSENGEEKKVLLLMANSHRAIRHPVLDNNGYALP 191 +N + NG++ +V + N HR R + D N +ALP Sbjct: 51 FNVYNINGDKLEVPKVSGNQHRVFRLKLPDPNRFALP 87
>IF4B_YEAST (P34167) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 436 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -3 Query: 221 YRPIDVNAMPWECVPVIVQYWMPDG 147 YR + +N +PW+ P VQ W+ DG Sbjct: 101 YRAV-INNIPWDITPEGVQAWVEDG 124
>ALGE3_AZOVI (Q44496) Poly(beta-D-mannuronate) C5 epimerase 3 (EC 5.1.3.-)| (Mannuronan epimerase 3) Length = 1839 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +2 Query: 248 SELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVGQEVLEG 391 ++ GG D L GD D L+G G+ +LD VG++ L G Sbjct: 1233 NDTLGGSDAHETLLGLDGD------DRLDGGAGNDILDGGVGRDTLTG 1274
>ACON_SCHPO (O13966) Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3)| (Citrate hydro-lyase) (Aconitase) Length = 778 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -2 Query: 258 VNSDIYKR-TYIKISSDRCECNAMGVRTRYCPVLDAGWPDVNLP 130 VN DI + +Y+K+ DR C + + AG P+V +P Sbjct: 74 VNQDIERGVSYLKLRPDRVACQDATAQMAILQFMSAGMPEVAVP 117
>SYT_DEIRA (Q9RSP3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 649 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -3 Query: 272 NLPHRLTPTYTNVHISRYRPIDVNAMPWECVP----VIVQYWMPDGPM*ICHKQ 123 NLP R +YT +RPI ++ P+ + ++++++ D P+ + +Q Sbjct: 498 NLPERFDISYTGEDGQEHRPIMIHRAPFGSIERFTGILIEHYAGDFPLWLAPRQ 551
>NADA_LISMO (Q8Y5N2) Quinolinate synthetase A| Length = 366 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +2 Query: 191 MALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSV 343 M H + + + R+ + GE+L +PC DEVV AD + S+ Sbjct: 12 MPTHYKQMTQVEMIARVTEIKAQLGENLFIPCHHYQKDEVVPFADAIGDSL 62
>PUT4_YEAST (P15380) Proline-specific permease| Length = 627 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +1 Query: 154 GIQYWTITGTHSHGIAFTSIGRYLDICTFVYVG 252 G +YW G +H + S+G + DI T + G Sbjct: 287 GFRYWQHPGAFAHHLTGGSLGNFTDIYTGIIKG 319
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = +1 Query: 130 WQIHIGPS-GIQYWTITGTHSH 192 + I + P G+ YWT+ G HSH Sbjct: 4030 YAIAVNPKRGMMYWTVVGDHSH 4051 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,023,545 Number of Sequences: 219361 Number of extensions: 1148648 Number of successful extensions: 3673 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 3556 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3672 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
