ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63e14 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/73 (49%), Positives = 45/73 (61%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RSVL GSTG Y RS+MSG +QT FFGY Y FFLMLGT+ F +SL Sbjct: 517 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 576 Query: 346 LFVRHIYRSIKCE 308 F+R+IY ++K + Sbjct: 577 KFIRYIYVNLKMD 589
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/73 (49%), Positives = 45/73 (61%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RSVL GSTG Y RS+MSG +QT FFGY Y FFLMLGT+ F +SL Sbjct: 534 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 593 Query: 346 LFVRHIYRSIKCE 308 F+R+IY ++K + Sbjct: 594 KFIRYIYVNLKMD 606
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/73 (49%), Positives = 45/73 (61%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RSVL GSTG Y RS+MSG +QT FFGY Y FFLMLGT+ F +SL Sbjct: 534 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 593 Query: 346 LFVRHIYRSIKCE 308 F+R+IY ++K + Sbjct: 594 KFIRYIYVNLKMD 606
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/73 (49%), Positives = 45/73 (61%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RSVL GSTG Y RS+MSG +QT FFGY Y FFLMLGT+ F +SL Sbjct: 534 RSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSL 593 Query: 346 LFVRHIYRSIKCE 308 F+R+IY ++K + Sbjct: 594 KFIRYIYVNLKMD 606
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 45.8 bits (107), Expect = 7e-05 Identities = 24/72 (33%), Positives = 34/72 (47%) Frame = -2 Query: 523 SVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLL 344 S L ST Y ++ M G QTSF+FGYM +M G +G+ + Sbjct: 516 SFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSA 575 Query: 343 FVRHIYRSIKCE 308 FVR IY ++K + Sbjct: 576 FVRKIYTNVKID 587
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 45.8 bits (107), Expect = 7e-05 Identities = 24/72 (33%), Positives = 34/72 (47%) Frame = -2 Query: 523 SVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLL 344 S L ST Y ++ M G QTSF+FGYM +M G +G+ + Sbjct: 518 SFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSA 577 Query: 343 FVRHIYRSIKCE 308 FVR IY ++K + Sbjct: 578 FVRKIYTNVKID 589
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 44.3 bits (103), Expect = 2e-04 Identities = 18/48 (37%), Positives = 31/48 (64%) Frame = -2 Query: 451 DMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLLFVRHIYRSIKCE 308 D+ F+ + +FGY + F+L+ GT+GF A+ +FVR IY ++K + Sbjct: 578 DIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RS L G T + ++ ++G T +FGY + FFL GT+GF A Sbjct: 591 RSFLTSGFTAVYFLVYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 650 Query: 346 LFVRHIYRSIKCE 308 FV IY +K + Sbjct: 651 WFVTKIYSVVKVD 663
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RS L G T + ++ ++G T +FGY + FFL GT+GF A Sbjct: 591 RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 650 Query: 346 LFVRHIYRSIKCE 308 FV IY +K + Sbjct: 651 WFVTKIYSVVKVD 663
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor| (p76) Length = 663 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RS L G T + ++ ++G T +FGY + FFL GT+GF A Sbjct: 591 RSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 650 Query: 346 LFVRHIYRSIKCE 308 FV IY +K + Sbjct: 651 WFVTKIYSVVKVD 663
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/73 (31%), Positives = 33/73 (45%) Frame = -2 Query: 526 RSVLCXGSTGXXXXXXXXXXYHARSDMSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASL 347 RS L G T + ++ ++G T +FGY + FFL GT+GF A Sbjct: 590 RSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACF 649 Query: 346 LFVRHIYRSIKCE 308 FV IY +K + Sbjct: 650 WFVTKIYSVVKVD 662
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 38.5 bits (88), Expect = 0.011 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = -2 Query: 448 MSGFMQTSFFFGYMTCVCYGFFLMLGTVGFRASLLFVRHIYRSIKCE 308 + GF + GY + + L+ G++GF +S+LFVR IY SIK + Sbjct: 621 LGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667
>B3AT_CHICK (P15575) Band 3 anion transport protein (Solute carrier family 4| member 1) Length = 922 Score = 28.9 bits (63), Expect = 9.1 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = -1 Query: 329 LPFHQVRVI*ARVVTSDMAITREAQEKQNNRLLMGLLLNFVSKQVACPPYEPPLKLH 159 L +H++R A V +D R+A L+G L F+ + PP E P + H Sbjct: 283 LSYHEIRRA-AATVMADRVFRRDAYLCGGRAELLGGLQGFLEASIVLPPQEVPSEQH 338
>HS2ST_DROME (P25722) Heparin sulfate O-sulfotransferase (EC 2.8.2.-)| Length = 349 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = -2 Query: 211 LC-PSKLHVLHMNLLSNYIILQVP 143 LC P+K HVLH+N+ +N +L +P Sbjct: 95 LCKPNKFHVLHINVTANMHVLSLP 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,045,792 Number of Sequences: 219361 Number of extensions: 1222866 Number of successful extensions: 2503 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2473 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2503 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
