Clone Name | rbah62p07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P17, full insert sequence Length = 1475 Score = 198 bits (100), Expect = 1e-47 Identities = 296/360 (82%), Gaps = 1/360 (0%) Strand = Plus / Minus Query: 216 tgcaggagttcctctgcatttcttttccttcttttggtgtggagttgtccactcctggta 275 |||| |||| |||||||||| |||||| |||||| | | |||||||| || |||||| | Sbjct: 1235 tgcaagagtgcctctgcatt-cttttcattctttggatacggagttgtgcattcctggaa 1177 Query: 276 cttgtgcaagctgccggtgaaatcggtgaacagcgcgtcgactccgatctctctgaccca 335 | |||||||| | || |||||||| ||||| ||| ||||||| || ||||| | || ||| Sbjct: 1176 cctgtgcaaggtaccagtgaaatcagtgaaaagcccgtcgacgccaatctcaccgagcca 1117 Query: 336 gtactcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatt 395 ||||| || ||| |||||||||||| ||||||| ||| |||||||| ||||||| || Sbjct: 1116 atactcgtactcaagataagggtcttggtggaagtcgaagtgcaagaacatgttctcgtt 1057 Query: 396 tctgaatgtgtatggatgcacctgaagattcagagcatgtgcccgtgccacgagatcggt 455 |||||| ||||||||||||||||||||||||||||| ||||| || || || |||||||| Sbjct: 1056 tctgaaagtgtatggatgcacctgaagattcagagcgtgtgctcgcgcgacaagatcggt 997 Query: 456 tgcagggcctaaatggttattctcggggggaatgattgtatccttccatggcccaatccc 515 || || |||| | ||||| ||| |||| |||||||| |||||||| ||||| || Sbjct: 996 tgggggacctaggtaattatttatgggaggaacaattgtatctttccatggtccaatgcc 937 Query: 516 aattacgtacttccttatgaacgtgagataatcgttcgaagttatctcatagtatgactg 575 || || ||||||||||||||||| || ||| ||| |||||||||||| ||||||||||| Sbjct: 936 aactatgtacttccttatgaacgcaaggtaagcgtccgaagttatctcgtagtatgactg 877
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 119 bits (60), Expect = 1e-23 Identities = 169/204 (82%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 216 tgcaggagttcctctgcatttcttttccttcttttggtgtggagttgtccactcctggta 275 |||| |||| |||||||||| |||||| |||||| | | |||||||| || |||||| | Sbjct: 22413 tgcaagagtgcctctgcatt-cttttcattctttggatacggagttgtgcattcctggaa 22355 Query: 276 cttgtgcaagctgccggtgaaatcggtgaacagcgcgtcgactccgatctctctgaccca 335 | |||||||| | || |||||||| ||||| ||| ||||||| || ||||| | || ||| Sbjct: 22354 cctgtgcaaggtaccagtgaaatcagtgaaaagcccgtcgacgccaatctcaccgagcca 22295 Query: 336 gtactcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatt 395 ||||| || ||| |||||||||||| ||||||| ||| |||||||| ||||||| || Sbjct: 22294 atactcgtactcaagataagggtcttggtggaagtcgaagtgcaagaacatgttctcgtt 22235 Query: 396 tctgaatgtgtatggatgcacctg 419 |||||| ||||||||||||||||| Sbjct: 22234 tctgaaagtgtatggatgcacctg 22211 Score = 89.7 bits (45), Expect = 9e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 415 acctgaagattcagagcatgtgcccgtgccacgagatcggttgcagggcctaaatggtta 474 ||||||||||||||||| ||||| || || || |||||||||| || |||| | ||| Sbjct: 22088 acctgaagattcagagcgtgtgctcgcgcgacaagatcggttgggggacctaggtaatta 22029 Query: 475 ttctcggggggaatgattgtatccttccatggcccaatcccaattacgtacttccttatg 534 || ||| |||| |||||||| |||||||| ||||| |||| || ||||||||||||| Sbjct: 22028 tttatgggaggaacaattgtatctttccatggtccaatgccaactatgtacttccttatg 21969 Query: 535 aacgtgagataatcgttcgaagttatctcatagtatgactg 575 |||| || ||| ||| |||||||||||| ||||||||||| Sbjct: 21968 aacgcaaggtaagcgtccgaagttatctcgtagtatgactg 21928
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 1e-23 Identities = 169/204 (82%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 216 tgcaggagttcctctgcatttcttttccttcttttggtgtggagttgtccactcctggta 275 |||| |||| |||||||||| |||||| |||||| | | |||||||| || |||||| | Sbjct: 22427166 tgcaagagtgcctctgcatt-cttttcattctttggatacggagttgtgcattcctggaa 22427108 Query: 276 cttgtgcaagctgccggtgaaatcggtgaacagcgcgtcgactccgatctctctgaccca 335 | |||||||| | || |||||||| ||||| ||| ||||||| || ||||| | || ||| Sbjct: 22427107 cctgtgcaaggtaccagtgaaatcagtgaaaagcccgtcgacgccaatctcaccgagcca 22427048 Query: 336 gtactcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatt 395 ||||| || ||| |||||||||||| ||||||| ||| |||||||| ||||||| || Sbjct: 22427047 atactcgtactcaagataagggtcttggtggaagtcgaagtgcaagaacatgttctcgtt 22426988 Query: 396 tctgaatgtgtatggatgcacctg 419 |||||| ||||||||||||||||| Sbjct: 22426987 tctgaaagtgtatggatgcacctg 22426964 Score = 89.7 bits (45), Expect = 9e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 415 acctgaagattcagagcatgtgcccgtgccacgagatcggttgcagggcctaaatggtta 474 ||||||||||||||||| ||||| || || || |||||||||| || |||| | ||| Sbjct: 22426841 acctgaagattcagagcgtgtgctcgcgcgacaagatcggttgggggacctaggtaatta 22426782 Query: 475 ttctcggggggaatgattgtatccttccatggcccaatcccaattacgtacttccttatg 534 || ||| |||| |||||||| |||||||| ||||| |||| || ||||||||||||| Sbjct: 22426781 tttatgggaggaacaattgtatctttccatggtccaatgccaactatgtacttccttatg 22426722 Query: 535 aacgtgagataatcgttcgaagttatctcatagtatgactg 575 |||| || ||| ||| |||||||||||| ||||||||||| Sbjct: 22426721 aacgcaaggtaagcgtccgaagttatctcgtagtatgactg 22426681
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 1e-23 Identities = 169/204 (82%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 216 tgcaggagttcctctgcatttcttttccttcttttggtgtggagttgtccactcctggta 275 |||| |||| |||||||||| |||||| |||||| | | |||||||| || |||||| | Sbjct: 22420195 tgcaagagtgcctctgcatt-cttttcattctttggatacggagttgtgcattcctggaa 22420137 Query: 276 cttgtgcaagctgccggtgaaatcggtgaacagcgcgtcgactccgatctctctgaccca 335 | |||||||| | || |||||||| ||||| ||| ||||||| || ||||| | || ||| Sbjct: 22420136 cctgtgcaaggtaccagtgaaatcagtgaaaagcccgtcgacgccaatctcaccgagcca 22420077 Query: 336 gtactcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatt 395 ||||| || ||| |||||||||||| ||||||| ||| |||||||| ||||||| || Sbjct: 22420076 atactcgtactcaagataagggtcttggtggaagtcgaagtgcaagaacatgttctcgtt 22420017 Query: 396 tctgaatgtgtatggatgcacctg 419 |||||| ||||||||||||||||| Sbjct: 22420016 tctgaaagtgtatggatgcacctg 22419993 Score = 89.7 bits (45), Expect = 9e-15 Identities = 132/161 (81%) Strand = Plus / Minus Query: 415 acctgaagattcagagcatgtgcccgtgccacgagatcggttgcagggcctaaatggtta 474 ||||||||||||||||| ||||| || || || |||||||||| || |||| | ||| Sbjct: 22419870 acctgaagattcagagcgtgtgctcgcgcgacaagatcggttgggggacctaggtaatta 22419811 Query: 475 ttctcggggggaatgattgtatccttccatggcccaatcccaattacgtacttccttatg 534 || ||| |||| |||||||| |||||||| ||||| |||| || ||||||||||||| Sbjct: 22419810 tttatgggaggaacaattgtatctttccatggtccaatgccaactatgtacttccttatg 22419751 Query: 535 aacgtgagataatcgttcgaagttatctcatagtatgactg 575 |||| || ||| ||| |||||||||||| ||||||||||| Sbjct: 22419750 aacgcaaggtaagcgtccgaagttatctcgtagtatgactg 22419710
>ref|NM_191352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1176 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 340 tcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatttctg 399 ||||| |||||||||||||| ||||||||||||| |||| ||||| |||||| || ||| Sbjct: 1016 tcatactcagcataagggtcctgatggaagttgaggtgcaggaattggttctcgttcctg 957 Query: 400 aatgtgtatggatgcacctgaagattcagagcatgtgc 437 ||||||| || || ||||||||||| |||||||||| Sbjct: 956 tatgtgtacgggtgtacctgaagattatgagcatgtgc 919
>dbj|AK066596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070K24, full insert sequence Length = 1618 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 340 tcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatttctg 399 ||||| |||||||||||||| ||||||||||||| |||| ||||| |||||| || ||| Sbjct: 1203 tcatactcagcataagggtcctgatggaagttgaggtgcaggaattggttctcgttcctg 1144 Query: 400 aatgtgtatggatgcacctgaagattcagagcatgtgc 437 ||||||| || || ||||||||||| |||||||||| Sbjct: 1143 tatgtgtacgggtgtacctgaagattatgagcatgtgc 1106
>dbj|AK061563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E04, full insert sequence Length = 1400 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 340 tcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatttctg 399 ||||| |||||||||||||| ||||||||||||| |||| ||||| |||||| || ||| Sbjct: 1159 tcatactcagcataagggtcctgatggaagttgaggtgcaggaattggttctcgttcctg 1100 Query: 400 aatgtgtatggatgcacctgaagattcagagcatgtgc 437 ||||||| || || ||||||||||| |||||||||| Sbjct: 1099 tatgtgtacgggtgtacctgaagattatgagcatgtgc 1062
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 340 tcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatttctg 399 ||||| |||||||||||||| ||||||||||||| |||| ||||| |||||| || ||| Sbjct: 32129835 tcatactcagcataagggtcctgatggaagttgaggtgcaggaattggttctcgttcctg 32129776 Query: 400 aatgtgta 407 ||||||| Sbjct: 32129775 tatgtgta 32129768
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 340 tcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatttctg 399 ||||| |||||||||||||| ||||||||||||| |||| ||||| |||||| || ||| Sbjct: 171649 tcatactcagcataagggtcctgatggaagttgaggtgcaggaattggttctcgttcctg 171590 Query: 400 aatgtgta 407 ||||||| Sbjct: 171589 tatgtgta 171582
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 340 tcatattcagcataagggtcttgatggaagttgaaatgcaagaatttgttctcatttctg 399 ||||| |||||||||||||| ||||||||||||| |||| ||||| |||||| || ||| Sbjct: 588 tcatactcagcataagggtcctgatggaagttgaggtgcaggaattggttctcgttcctg 529 Query: 400 aatgtgta 407 ||||||| Sbjct: 528 tatgtgta 521
>gb|AY104313.1| Zea mays PCO093744 mRNA sequence Length = 1823 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 367 aagttgaaatgcaagaatttgttctcatttctgaatgtgtatggatgcacctgaagattc 426 |||||||| |||| ||| | |||||| || ||| | ||||||||||| ||||| ||||| Sbjct: 1207 aagttgaagtgcaggaactggttctcgttcctgtacgtgtatggatgtacctggagatta 1148 Query: 427 agagcatgtgcccgtgccacgagatc 452 |||||||||||||||| || ||||| Sbjct: 1147 tgagcatgtgcccgtgcgacaagatc 1122
>ref|NM_120885.2| Arabidopsis thaliana glycerophosphodiester phosphodiesterase AT5G08030 mRNA, complete cds Length = 1238 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 387 gttctcatttctgaatgtgtatggatgcacctgaagatt 425 ||||||||| | | ||||||||||||| ||||||||||| Sbjct: 969 gttctcattacggtatgtgtatggatggacctgaagatt 931 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 attgtatccttccatggcccaatcccaattac 521 ||||| || |||||||| |||||||||||||| Sbjct: 866 attgtgtctttccatggaccaatcccaattac 835
>gb|AC093136.3| Pan troglodytes clone RP43-116L11, complete sequence Length = 179629 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 107 cattttctccgtactaacaataatgaaatag 137 ||||||||| ||||| ||||||||||||||| Sbjct: 153727 cattttctctgtactgacaataatgaaatag 153697
>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence Length = 240379 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 107 cattttctccgtactaacaataatgaaatag 137 ||||||||| ||||| ||||||||||||||| Sbjct: 186808 cattttctctgtactgacaataatgaaatag 186838
>gb|BT023450.1| Arabidopsis thaliana At5g08030 gene, complete cds Length = 1225 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 387 gttctcatttctgaatgtgtatggatgcacctgaagatt 425 ||||||||| | | ||||||||||||| ||||||||||| Sbjct: 980 gttctcattacggtatgtgtatggatggacctgaagatt 942 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 attgtatccttccatggcccaatcccaattac 521 ||||| || |||||||| |||||||||||||| Sbjct: 877 attgtgtctttccatggaccaatcccaattac 846
>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete sequence Length = 217260 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 107 cattttctccgtactaacaataatgaaatag 137 ||||||||| ||||| ||||||||||||||| Sbjct: 157532 cattttctctgtactgacaataatgaaatag 157562
>gb|AC146373.5| Pan troglodytes BAC clone RP43-60G24 from 7, complete sequence Length = 151517 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 107 cattttctccgtactaacaataatgaaata 136 ||||||||| ||||| |||||||||||||| Sbjct: 28189 cattttctctgtactgacaataatgaaata 28160
>gb|AC079355.6| Homo sapiens BAC clone CTD-2526L21 from 7, complete sequence Length = 140241 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 107 cattttctccgtactaacaataatgaaata 136 ||||||||| ||||| |||||||||||||| Sbjct: 114973 cattttctctgtactgacaataatgaaata 115002
>gb|AC118758.3| Homo sapiens BAC clone RP13-580B18 from 7, complete sequence Length = 150813 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 107 cattttctccgtactaacaataatgaaata 136 ||||||||| ||||| |||||||||||||| Sbjct: 23628 cattttctctgtactgacaataatgaaata 23599
>emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chromosome 9q21.11-21.2 Contains the 5' end of the PIP5K1B gene for phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7), a novel gene (MGC17374), a adaptor-related protein complex 3, mu 2 subunit (P47B, AP47B, CLA20) (AP3M2) pseudogene, the 3' end of a novel gene and 2 CpG islands, complete sequence Length = 154071 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 221 gagttcctctgcatttcttttccttctttt 250 |||||| ||||||||||||||| ||||||| Sbjct: 29615 gagttcatctgcatttcttttctttctttt 29586
>gb|AC159986.4| Pan troglodytes BAC clone CH251-6M11 from chromosome 7, complete sequence Length = 165482 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 107 cattttctccgtactaacaataatgaaata 136 ||||||||| ||||| |||||||||||||| Sbjct: 75929 cattttctctgtactgacaataatgaaata 75958
>emb|CR388054.11| Zebrafish DNA sequence from clone CH211-82E18 in linkage group 1, complete sequence Length = 162569 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 ttccatggcccaatcccaatt 519 ||||||||||||||||||||| Sbjct: 120439 ttccatggcccaatcccaatt 120419
>gb|AC125360.4| Mus musculus BAC clone RP23-58E21 from 12, complete sequence Length = 170040 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cctctgcatttcttttccttctttt 250 |||||||||||||||| |||||||| Sbjct: 38284 cctctgcatttcttttacttctttt 38308
>emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in linkage group 1, complete sequence Length = 209946 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ttccatggcccaatcccaatt 519 ||||||||||||||||||||| Sbjct: 131022 ttccatggcccaatcccaatt 131042
>emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in linkage group 1, complete sequence Length = 195436 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ttccatggcccaatcccaatt 519 ||||||||||||||||||||| Sbjct: 82142 ttccatggcccaatcccaatt 82162
>dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24, complete sequence Length = 139072 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 atagaatagtactagtattaa 100 ||||||||||||||||||||| Sbjct: 50121 atagaatagtactagtattaa 50141
>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete sequence Length = 200458 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 atagaatagtactagtattaa 100 ||||||||||||||||||||| Sbjct: 195499 atagaatagtactagtattaa 195519
>gb|AY510455.1| Aspergillus flavus isolate AF36 aflatoxin biosynthesis gene cluster, complete sequence Length = 78264 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 21822 caagctgccggtgaaatcgg 21841
>ref|NM_111863.1| Arabidopsis thaliana acyltransferase AT3G10280 mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tcattttctccgtactaacaataa 129 |||| ||||||||||||||||||| Sbjct: 658 tcatgttctccgtactaacaataa 635
>ref|NM_130237.2| Arabidopsis thaliana HIC (HIGH CARBON DIOXIDE); acyltransferase AT2G46720 (HIC) mRNA, complete cds Length = 2839 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tcattttctccgtactaacaataa 129 |||| ||||||||||||||||||| Sbjct: 2117 tcatgttctccgtactaacaataa 2094
>gb|AY510451.1| Aspergillus flavus isolate AF13 aflatoxin biosynthesis gene cluster, complete sequence Length = 88318 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 30553 caagctgccggtgaaatcgg 30572
>gb|AY510453.1| Aspergillus flavus isolate AF70 aflatoxin biosynthesis gene cluster, complete sequence Length = 75829 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 22153 caagctgccggtgaaatcgg 22172
>gb|AC136091.2| Rattus norvegicus 18 BAC CH230-329A5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 189650 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ctaggaagcaattacataga 84 |||||||||||||||||||| Sbjct: 59110 ctaggaagcaattacataga 59129
>gb|L48183.3|ASNFAS1A Aspergillus parasiticus fatty acid synthetase (fas-1a) gene Length = 13217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 3393 caagctgccggtgaaatcgg 3412
>gb|AY371490.1| Aspergillus parasiticus aflatoxin pathway gene cluster, complete sequence Length = 82081 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 22558 caagctgccggtgaaatcgg 22577
>gb|AY539897.1| Rattus norvegicus LRRGT00146 mRNA, complete cds Length = 1335 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atctcatgcaggagttcctc 229 |||||||||||||||||||| Sbjct: 188 atctcatgcaggagttcctc 207
>gb|AC139360.8| Mus musculus chromosome 3, clone RP23-324F4, complete sequence Length = 186836 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctctgcatttcttttcctt 245 |||||||||||||||||||| Sbjct: 94813 cctctgcatttcttttcctt 94794
>emb|BX323815.12| Zebrafish DNA sequence from clone DKEY-148J13 in linkage group 14, complete sequence Length = 73527 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tccatggcccaatcccaatt 519 |||||||||||||||||||| Sbjct: 34695 tccatggcccaatcccaatt 34714
>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tctgcatttcttttccttct 247 |||||||||||||||||||| Sbjct: 61814 tctgcatttcttttccttct 61833
>gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome 3, complete sequence Length = 148675 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ctctgcatttcttttccttctttt 250 ||||||||||| |||||||||||| Sbjct: 47810 ctctgcatttcatttccttctttt 47787
>gb|AC114000.5| Mus musculus BAC clone RP23-161K1 from chromosome 14, complete sequence Length = 212322 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 acagttggcacttcccgtgatttc 65 ||||||||||||| |||||||||| Sbjct: 105072 acagttggcactttccgtgatttc 105049
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence, complete sequence Length = 87937 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tcattttctccgtactaacaataa 129 |||| ||||||||||||||||||| Sbjct: 49900 tcatgttctccgtactaacaataa 49923
>gb|AC126460.4| Mus musculus BAC clone RP23-187E3 from 3, complete sequence Length = 192918 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctctgcatttcttttcctt 245 |||||||||||||||||||| Sbjct: 105410 cctctgcatttcttttcctt 105391
>gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 map 3, complete sequence Length = 224451 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ctctgcatttcttttccttctttt 250 ||||||||||| |||||||||||| Sbjct: 221980 ctctgcatttcatttccttctttt 221957
>emb|AL357354.10| Human DNA sequence from clone RP11-465C5 on chromosome Xq21.2-22.1 Contains a phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS) pseudogene, complete sequence Length = 194612 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tccaaaagggaggaggtata 158 |||||||||||||||||||| Sbjct: 143256 tccaaaagggaggaggtata 143275
>emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chromosome 9 Contains the 5' end of the APBA1 gene for myloid beta (A4) precursor protein-binding, family A, member 1 (X11), two novel genes, the 5' end of a novel gene possible ortholog of mouse RIKEN cDNA 1700028P14 gene and two CpG islands, complete sequence Length = 189277 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tttccttcttttggtgtgga 258 |||||||||||||||||||| Sbjct: 103448 tttccttcttttggtgtgga 103467
>emb|AL022725.8|HS430A16 Human DNA sequence from clone RP3-430A16 on chromosome 6p24.1-25.3 Contains part of the CDYL gene for Y chromosome-like chromodomain protein and a CpG island, complete sequence Length = 129756 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ggaagcaattacatagaata 87 |||||||||||||||||||| Sbjct: 47607 ggaagcaattacatagaata 47626
>gb|AC142454.4| Mus musculus BAC clone RP23-313G1 from chromosome 3, complete sequence Length = 183223 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cctctgcatttcttttcctt 245 |||||||||||||||||||| Sbjct: 94811 cctctgcatttcttttcctt 94792
>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project) Length = 89988 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 490 attgtatccttccatggcccaatcccaattac 521 ||||| || |||||||| |||||||||||||| Sbjct: 2168 attgtgtctttccatggaccaatcccaattac 2199
>emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, BAC clone F13G24 (ESSA project) Length = 88095 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 490 attgtatccttccatggcccaatcccaattac 521 ||||| || |||||||| |||||||||||||| Sbjct: 82410 attgtgtctttccatggaccaatcccaattac 82441
>emb|BX323793.10| Zebrafish DNA sequence from clone DKEY-185P18 in linkage group 16, complete sequence Length = 170199 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 ttgaaatgcaagaatttgttctcatttctgaa 401 |||||||||||||| || |||| ||||||||| Sbjct: 74550 ttgaaatgcaagaacttattcttatttctgaa 74519
>dbj|AB196490.1| Aspergillus oryzae DNA, aflatoxin biosynthesis gene cluster, complete sequence, strain: RIB40 Length = 89641 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 31887 caagctgccggtgaaatcgg 31906
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 38382 caagctgccggtgaaatcgg 38401
>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete sequence Length = 55870 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tcattttctccgtactaacaataa 129 |||| ||||||||||||||||||| Sbjct: 54062 tcatgttctccgtactaacaataa 54039
>gb|AF391094.1| Aspergillus parasiticus fatty acid synthase alpha subunit and fatty acid synthase beta subunit genes, complete cds Length = 13144 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caagctgccggtgaaatcgg 301 |||||||||||||||||||| Sbjct: 3393 caagctgccggtgaaatcgg 3412
>gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, complete sequence Length = 139226 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tccaaaagggaggaggtata 158 |||||||||||||||||||| Sbjct: 84054 tccaaaagggaggaggtata 84035
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtgaaatcggtgaacagcgc 311 |||||||||||||||||||| Sbjct: 270325 gtgaaatcggtgaacagcgc 270306
>gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 map 3, complete sequence Length = 206230 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ctctgcatttcttttccttctttt 250 ||||||||||| |||||||||||| Sbjct: 62820 ctctgcatttcatttccttctttt 62797
>gb|AC114533.17| Mus musculus chromosome 1, clone RP24-255G23, complete sequence Length = 147505 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttactaaatgaagtttttc 23 |||||||||||||||||||| Sbjct: 70565 tttactaaatgaagtttttc 70546
>emb|BX830013.1|CNS0A1JL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1225 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 attgtatccttccatggcccaatcccaattac 521 ||||| || |||||||| |||||||||||||| Sbjct: 878 attgtgtctttccatggaccaatcccaattac 847
>gb|AF188486.1|AF188486 Arabidopsis thaliana putative 3-keto-acyl-CoA synthase (HIC) gene, partial sequence Length = 1584 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tcattttctccgtactaacaataa 129 |||| ||||||||||||||||||| Sbjct: 684 tcatgttctccgtactaacaataa 661
>gb|AF188485.1|AF188485 Arabidopsis thaliana putative 3-keto-acyl-CoA synthase (HIC) gene, complete cds Length = 5600 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tcattttctccgtactaacaataa 129 |||| ||||||||||||||||||| Sbjct: 2251 tcatgttctccgtactaacaataa 2228
>gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C6, complete sequence Length = 160156 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tccaaaagggaggaggtata 158 |||||||||||||||||||| Sbjct: 106682 tccaaaagggaggaggtata 106663
>gb|AC098820.3| Homo sapiens BAC clone RP11-253L15 from 2, complete sequence Length = 155669 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ttttttactaaatgaagttt 20 |||||||||||||||||||| Sbjct: 74550 ttttttactaaatgaagttt 74569
>ref|XM_576237.1| PREDICTED: Rattus norvegicus similar to LRRGT00146 (LOC500846), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atctcatgcaggagttcctc 229 |||||||||||||||||||| Sbjct: 188 atctcatgcaggagttcctc 207
>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11, complete sequence Length = 158170 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 tccatggcccaatcccaatt 519 |||||||||||||||||||| Sbjct: 142164 tccatggcccaatcccaatt 142183
>gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, complete sequence Length = 214934 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ctctgcatttcttttccttctttt 250 |||| ||||||||||||||||||| Sbjct: 7277 ctcttcatttcttttccttctttt 7300
>emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete sequence Length = 221319 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ctctgcatttcttttccttctttt 250 |||| ||||||||||||||||||| Sbjct: 130616 ctcttcatttcttttccttctttt 130593
>dbj|AB061271.2| Zea mays ZmNAS2 mRNA, complete cds Length = 1806 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 tcggtgaacagcgcgtcgac 317 |||||||||||||||||||| Sbjct: 953 tcggtgaacagcgcgtcgac 934
>gb|U64985.1|APU64985 Anas platyrhynchos serum amyloid A gene, complete cds Length = 1632 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cctctgcatttcttttcctt 245 |||||||||||||||||||| Sbjct: 328 cctctgcatttcttttcctt 347
>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence Length = 160295 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tctgcatttcttttccttct 247 |||||||||||||||||||| Sbjct: 114516 tctgcatttcttttccttct 114535
>emb|AL713897.7| Mouse DNA sequence from clone RP23-373J8 on chromosome X, complete sequence Length = 166240 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ctctgcatttcttttccttctttt 250 |||||||||||||||| ||||||| Sbjct: 142362 ctctgcatttcttttctttctttt 142339
>emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chromosome 4, complete sequence Length = 220638 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tttcttttccttcttttggt 253 |||||||||||||||||||| Sbjct: 67531 tttcttttccttcttttggt 67512
>gb|K03152.1|PHVLBA Phaseolus vulgaris (kidney bean) leghemoglobin gene, complete cds Length = 933 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aagaatttgttctcatttct 398 |||||||||||||||||||| Sbjct: 325 aagaatttgttctcatttct 344
>dbj|AB004549.1| Phaseolus vulgaris DNA for leghemoglobin, complete cds Length = 717 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aagaatttgttctcatttct 398 |||||||||||||||||||| Sbjct: 211 aagaatttgttctcatttct 230 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,122,455 Number of Sequences: 3902068 Number of extensions: 5122455 Number of successful extensions: 114014 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113747 Number of HSP's gapped (non-prelim): 267 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)