ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62p06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASR2_LYCES (P37219) Abscisic stress ripening protein 2 31 2.4

>ASR2_LYCES (P37219) Abscisic stress ripening protein 2|
          Length = 114

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/60 (30%), Positives = 20/60 (33%)
 Frame = -2

Query: 488 LYEKHEAXKDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXKQDXKEAKEASGXXKHHH 309
           L+EKH+A KDP                            H  K   KE KE  G   HHH
Sbjct: 53  LHEKHKAKKDPEHAHKHKIEEEIMAVAAVGAGGFAFHEHHQKKDAKKEKKEVEGGHHHHH 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,102,519
Number of Sequences: 219361
Number of extensions: 635883
Number of successful extensions: 1605
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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