Clone Information

BLAST Search Result

Clone Name	rbah62p04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast p...	159	2e-39
2	PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast p...	159	2e-39
3	PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast p...	159	2e-39
4	PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast p...	152	1e-37
5	PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast p...	149	2e-36
6	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	36	0.025
7	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	34	0.095
8	YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17	33	0.12
9	HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC...	33	0.12
10	YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48)	33	0.16
11	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	32	0.36
12	CBR_DUNBA (P27516) Carotene biosynthesis-related protein CBR, ch...	32	0.36
13	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	32	0.36
14	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	32	0.36
15	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	32	0.36
16	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	32	0.36
17	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	32	0.36
18	HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC ...	32	0.36
19	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	32	0.36
20	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	32	0.36
21	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	32	0.36
22	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	32	0.36
23	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	32	0.36
24	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	32	0.36
25	CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty...	32	0.36
26	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	32	0.47
27	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	32	0.47
28	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	32	0.47
29	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	32	0.47
30	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	32	0.47
31	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	32	0.47
32	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	32	0.47
33	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	32	0.47
34	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	31	0.62
35	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	31	0.62
36	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	31	0.62
37	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	31	0.62
38	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	31	0.81
39	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	31	0.81
40	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	31	0.81
41	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	31	0.81
42	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	31	0.81
43	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	31	0.81
44	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	31	0.81
45	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	31	0.81
46	YCF17_CYACA (Q9TM07) Hypothetical 5.1 kDa protein ycf17	30	1.1
47	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	30	1.1
48	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	30	1.1
49	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	30	1.1
50	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	30	1.1
51	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	30	1.1
52	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	30	1.4
53	GGA3_MOUSE (Q8BMI3) ADP-ribosylation factor-binding protein GGA3...	30	1.4
54	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	30	1.4
55	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	30	1.4
56	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	30	1.4
57	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	30	1.4
58	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	30	1.4
59	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	30	1.8
60	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	30	1.8
61	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	30	1.8
62	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	30	1.8
63	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	29	2.3
64	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	29	2.3
65	E13B_PRUPE (P52408) Glucan endo-1,3-beta-glucosidase, basic isof...	29	2.3
66	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	29	2.3
67	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	29	2.3
68	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	29	3.1
69	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	29	3.1
70	PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-pho...	29	3.1
71	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	28	4.0
72	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	28	4.0
73	PIV6_ADECR (Q96686) Minor capsid protein 6 precursor (Minor caps...	28	4.0
74	PIV6_ADECC (Q65954) Minor capsid protein 6 precursor (Minor caps...	28	4.0
75	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	28	4.0
76	ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear transloca...	28	4.0
77	ARNT2_HUMAN (Q9HBZ2) Aryl hydrocarbon receptor nuclear transloca...	28	4.0
78	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	28	5.2
79	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	28	5.2
80	INHA_PIG (P04087) Inhibin alpha chain precursor	28	6.8
81	PRD16_HUMAN (Q9HAZ2) PR domain zinc finger protein 16 (PR domain...	28	6.8
82	CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor	28	6.8
83	CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell ...	28	6.8
84	SIL1_HUMAN (Q9H173) Nucleotide exchange factor SIL1 precursor (B...	28	6.8
85	BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle pr...	27	8.9
86	MUTS_VIBPA (Q87LQ9) DNA mismatch repair protein mutS	27	8.9
87	YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I	27	8.9
88	VATB_TRYCO (Q26976) Vacuolar ATP synthase subunit B (EC 3.6.3.14...	27	8.9

>PSBS_TOBAC (Q9SMB4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score =  159 bits (402), Expect = 2e-39
 Identities = 78/98 (79%), Positives = 89/98 (90%)
 Frame = -1

Query: 403 VIAPXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIE 224
           VI P KGF+SALGLSEGGPLF FTK+NELFVGRLAQLGIAFSIIGEIITGKGALAQLN E
Sbjct: 177 VIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFE 236

Query: 223 TGVPISXIEPLVLXXVVXFFIAAINPGTGKFISGEDDD 110
           TGVPI+ IEPL+L  +V FF+AAINPGTGKF++ E+++
Sbjct: 237 TGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274



 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 42/73 (57%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -1

Query: 340 GFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISXIEPLVLXXVVXFFI 161
           GFTK NELFVGR+A +G A S++GE ITGKG LAQLN+ETG+PI   EPL+L  ++   +
Sbjct: 92  GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLL 151

Query: 160 AAIN--PGTGKFI 128
            AI      GKFI
Sbjct: 152 GAIGALEDRGKFI 164

to top

>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score =  159 bits (402), Expect = 2e-39
 Identities = 79/98 (80%), Positives = 87/98 (88%)
 Frame = -1

Query: 403 VIAPXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIE 224
           VI P K F+SALGLSEGGPLFGFTK+NELFVGRLAQLGIAFSIIGEIITGKGALAQLN E
Sbjct: 179 VIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFE 238

Query: 223 TGVPISXIEPLVLXXVVXFFIAAINPGTGKFISGEDDD 110
           TGVPI+ IEPL+L  +  FF AAINPGTGKFI+ E++D
Sbjct: 239 TGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276



 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = -1

Query: 340 GFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISXIEPLVLXXVVXFFI 161
           GFTK NELFVGR+A +G A S++GE ITGKG LAQLN+ETG+PI   EPL+L  ++   +
Sbjct: 94  GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLL 153

Query: 160 AAINP--GTGKFISGEDDD*IGTGTRECFLAINCTYVRAL 47
            AI      G+FI   DD    TG  +  +    ++  AL
Sbjct: 154 GAIGALGDRGRFI---DDPAPATGLEKAVIPPGKSFKSAL 190

to top

>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 276

 Score =  159 bits (402), Expect = 2e-39
 Identities = 79/98 (80%), Positives = 87/98 (88%)
 Frame = -1

Query: 403 VIAPXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIE 224
           VI P K F+SALGLSEGGPLFGFTK+NELFVGRLAQLGIAFSIIGEIITGKGALAQLN E
Sbjct: 179 VIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFE 238

Query: 223 TGVPISXIEPLVLXXVVXFFIAAINPGTGKFISGEDDD 110
           TGVPI+ IEPL+L  +  FF AAINPGTGKFI+ E++D
Sbjct: 239 TGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276



 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = -1

Query: 340 GFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISXIEPLVLXXVVXFFI 161
           GFTK NELFVGR+A +G A S++GE ITGKG LAQLN+ETG+PI   EPL+L  ++   +
Sbjct: 94  GFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLL 153

Query: 160 AAINP--GTGKFISGEDDD*IGTGTRECFLAINCTYVRAL 47
            AI      GKF+   DD    TG  +  +    ++  AL
Sbjct: 154 GAIGALGDRGKFV---DDPTPPTGLEKAVIPPGKSFKSAL 190

to top

>PSBS_SPIOL (Q02060) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 274

 Score =  152 bits (385), Expect = 1e-37
 Identities = 78/98 (79%), Positives = 85/98 (86%)
 Frame = -1

Query: 403 VIAPXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIE 224
           VI P K  RSALGL   GPLFGFTKSNELFVGRLAQLG AFS+IGEIITGKGALAQLNIE
Sbjct: 176 VIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIE 235

Query: 223 TGVPISXIEPLVLXXVVXFFIAAINPGTGKFISGEDDD 110
           TGVPI+ IEPLVL  VV FFIAAINPGTGKFI+ ++++
Sbjct: 236 TGVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273



 Score = 78.6 bits (192), Expect = 3e-15
 Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = -1

Query: 340 GFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISXIEPLVLXXVVXFFI 161
           GFTK NELFVGR+A +G A S++GE ITGKG L+QLN+ETG+PI   EPL+L  ++   +
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 160 AAINP--GTGKFI 128
            AI      G+F+
Sbjct: 153 GAIGALGDRGRFV 165

to top

>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor|
           (CP22)
          Length = 265

 Score =  149 bits (375), Expect = 2e-36
 Identities = 75/98 (76%), Positives = 82/98 (83%)
 Frame = -1

Query: 403 VIAPXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIE 224
           VI P K  RSALGL E GPLFGFTK+NELFVGRLAQLGIAFS+IGEIITGKGALAQLNIE
Sbjct: 167 VIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIE 226

Query: 223 TGVPISXIEPLVLXXVVXFFIAAINPGTGKFISGEDDD 110
           TG+PI  IEPLVL  V  FF AAINPG GKFI+ + ++
Sbjct: 227 TGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264



 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
 Frame = -1

Query: 340 GFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISXIEPLVLXXVVXFFI 161
           GFTK+NELFVGR+A +G A S++GE +TGKG LAQLN+ETG+PI   EPL+L  ++   +
Sbjct: 84  GFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLL 143

Query: 160 AAINP--GTGKFI 128
            AI      GKF+
Sbjct: 144 GAIGALGDRGKFV 156

to top

>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    FG  K  EL  GRLA L +    +  I+TGKG L  L      P++
Sbjct: 197 LGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVN 251

to top

>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  LN     P++
Sbjct: 200 LGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVA 254

to top

>YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17|
          Length = 49

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -1

Query: 343 FGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNI 227
           +GFT   E + GRLA LG   +++ E +TG+G L  L I
Sbjct: 10  WGFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGI 48

to top

>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)|
           (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme
           synthetase 2)
          Length = 512

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -1

Query: 343 FGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNI 227
           +G+TKS E + GR A L +   ++ E+ TGKG L Q  I
Sbjct: 470 WGWTKSAETWNGRAAMLAVLALLVLEVTTGKGFLHQWGI 508

to top

>YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48)|
          Length = 48

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -1

Query: 343 FGFTKSNELFVGRLAQLGIAFSIIGEIITGKGAL 242
           +GFT S E + GR A +G    I  E++TGKG L
Sbjct: 8   WGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLL 41

to top

>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 198 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

to top

>CBR_DUNBA (P27516) Carotene biosynthesis-related protein CBR, chloroplast|
           precursor
          Length = 172

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 346 LFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           + GF+ + E+  GRLA LG   ++  E+ TG+  L QL
Sbjct: 70  VMGFSGAPEIINGRLAMLGFVAALGAELSTGESVLTQL 107

to top

>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 197 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

to top

>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 197 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

to top

>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 197 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

to top

>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 197 LGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

to top

>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 197 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

to top

>HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)|
           (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme
           synthetase 2)
          Length = 526

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 343 FGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNI 227
           +G+TKS E + GR A L +   ++ E+ TG+G L Q  I
Sbjct: 483 WGWTKSAETWNGRAAMLAVLALLVLEVTTGEGFLHQWGI 521

to top

>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253

to top

>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253

to top

>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 160 LGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVN 214

to top

>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)|
           (LHCP) (Fragment)
          Length = 116

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 48  LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 102

to top

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 198 LGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVN 252

to top

>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 201 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 255

to top

>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 194 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 248

to top

>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 187 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241

to top

>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 200 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVN 254

to top

>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 196 LGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250

to top

>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 138 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192

to top

>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 195 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVN 249

to top

>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  ++TGKG L  L      P++
Sbjct: 198 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVN 252

to top

>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 206 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 260

to top

>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L+     P++
Sbjct: 169 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVA 223

to top

>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L+     P++
Sbjct: 197 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVA 251

to top

>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 198 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

to top

>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 193 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 247

to top

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 195 LGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVA 249

to top

>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  EL  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 197 LGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVA 251

to top

>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 197 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251

to top

>YCF17_CYACA (Q9TM07) Hypothetical 5.1 kDa protein ycf17|
          Length = 43

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 349 PLFGFTKSNELFVGRLAQLGIAFSIIGEIIT 257
           P +GF +S EL  GRLA L    S+  E IT
Sbjct: 2   PKYGFHQSTELINGRLAMLAFILSLFIEFIT 32

to top

>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 210 LGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264

to top

>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 197 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVA 251

to top

>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLN 230
           LGL++    F   K  EL  GRLA   +    +  I+TGKG +  L+
Sbjct: 197 LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLS 243

to top

>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 394 PXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           P   +   LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L
Sbjct: 189 PGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242

to top

>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           LGL+E    F   K  E   GRLA   +    I  I+TGKG L  L
Sbjct: 199 LGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENL 244

to top

>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 394 PXKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           P   +   LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L
Sbjct: 192 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245

to top

>GGA3_MOUSE (Q8BMI3) ADP-ribosylation factor-binding protein GGA3|
           (Golgi-localized, gamma ear-containing, ARF-binding
           protein 3)
          Length = 718

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 219 PVSMLSCASAPLPVMI-SPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERK 383
           PVS  S + APLP    +P++       AS PT+S+   +  +   P+L P+AE K
Sbjct: 446 PVSTSSMSQAPLPAAFPAPVVP------ASAPTHSTGSFMFSSGPAPALAPKAEPK 495

to top

>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 196 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVA 250

to top

>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 210 LGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264

to top

>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVN 253

to top

>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E    F   K   +  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 199 LGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

to top

>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 197 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVA 251

to top

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+     F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 198 LGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

to top

>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+     F   K  EL  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 199 LGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253

to top

>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 197 LGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVA 251

to top

>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+     F   K  EL  GRLA   +    +  I+TGKG +  L      P++
Sbjct: 199 LGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253

to top

>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++        K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 188 LGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 242

to top

>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL++    F   +  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 198 LGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252

to top

>E13B_PRUPE (P52408) Glucan endo-1,3-beta-glucosidase, basic isoform precursor|
           (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (PpGns1)
          Length = 350

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -1

Query: 334 TKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPISXIEPLV 188
           TKSN   VGRL  L     ++G+++ G  A  Q    TG PI     +V
Sbjct: 2   TKSNSSSVGRLLSLISIVLLLGQLVVGSLATKQ---HTGAPIGVCNGMV 47

to top

>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           LGL+E        K  EL  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 196 LGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250

to top

>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLN 230
           LGL++    F   K  E+  GRLA   +    +  I+TGKG +  L+
Sbjct: 185 LGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLD 231

to top

>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPIS 206
           L L++    F   K  E+  GRLA   +    +  I+TGKG L  L      P++
Sbjct: 177 LALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVN 231

to top

>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           LGL++    F   K  E+  GRLA        +  I+TGKG +  L
Sbjct: 206 LGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENL 251

to top

>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +3

Query: 303 SRPTNSSFDLVNPNSGPPSLRPRAERKPL 389
           S+  NSSF L   NSGP S  PR    P+
Sbjct: 34  SKKVNSSFQLPAKNSGPASSEPRLTLAPV 62

to top

>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           LGL++    F   K  E+  GRLA        +  I+TGKG +  L
Sbjct: 188 LGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNL 233

to top

>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           LGL +    F   K  E+  GRLA   +    +  I+TGKG +  L
Sbjct: 196 LGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 241

to top

>PIV6_ADECR (Q96686) Minor capsid protein 6 precursor (Minor capsid protein VI)|
           [Contains: Protease cofactor]
          Length = 238

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 246 APLPVMISPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERKPL 389
           APL  M  P    A P  A RPT      + P+  PP   P++   P+
Sbjct: 164 APLVPMTRPHPSMARPVIADRPTTLE---LKPSDQPPPYSPQSSNMPV 208

to top

>PIV6_ADECC (Q65954) Minor capsid protein 6 precursor (Minor capsid protein VI)|
           [Contains: Protease cofactor]
          Length = 238

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 246 APLPVMISPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERKPL 389
           APL  M  P    A P  A RPT      + P+  PP   P++   P+
Sbjct: 164 APLVPMTRPHPSMARPVIADRPTTLE---LKPSDQPPPYSPQSSNMPV 208

to top

>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 370 LGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQL 233
           LGL++    F   K  E+  GRLA        +  I+TGKG +  L
Sbjct: 185 LGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNL 230

to top

>ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 712

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 148 PGTGKFISGEDDD*IGTGTRECFLAINCTYVRALPVC 38
           P  G  I  ED D +G G++ C +AI    V + PVC
Sbjct: 290 PPAGMTIPEEDAD-VGQGSKYCLVAIGRLQVTSSPVC 325

to top

>ARNT2_HUMAN (Q9HBZ2) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 706

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 148 PGTGKFISGEDDD*IGTGTRECFLAINCTYVRALPVC 38
           P  G  I  ED D +G G++ C +AI    V + PVC
Sbjct: 279 PPAGMTIPEEDAD-VGQGSKYCLVAIGRLQVTSSPVC 314

to top

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 258 VMISPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERKPL 389
           V+  P +  A P   SRP+N +  L    + PP++ P   + PL
Sbjct: 856 VVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPL 899

to top

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 258 VMISPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERKPL 389
           V+  P +  A P   SRP+N +  L    + PP++ P   + PL
Sbjct: 858 VVSPPALHNALPQQPSRPSNRAAALPPKPTRPPAVSPALAQPPL 901

to top

>INHA_PIG (P04087) Inhibin alpha chain precursor|
          Length = 364

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +3

Query: 225 SMLSCASAPLPVMISP----MMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAER 380
           ++L  A++ LP++  P    ++     SC++RP  + F + +  + PPS   RA R
Sbjct: 175 AVLHLAASALPLLTHPVLVLLLRCPLCSCSARPEATPFLVAHTRARPPSGGERARR 230

to top

>PRD16_HUMAN (Q9HAZ2) PR domain zinc finger protein 16 (PR domain-containing|
           protein 16) (Transcription factor MEL1)
          Length = 1276

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 252 LPVMISPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERKPLXGAM 401
           LP+  SPMM+KA PS +    +  F+   P+   P   P +   P   A+
Sbjct: 461 LPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPAL 510

to top

>CD2_MACFA (Q6SZ61) T-cell surface antigen CD2 precursor|
          Length = 351

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 306 RPTNSSFDLVNPNSGPPSLRPRAERKPLXGA 398
           RP   S   V+   GPP  RPR + KP  GA
Sbjct: 311 RPPAPSGTQVHQQKGPPLPRPRVQPKPPQGA 341

to top

>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface|
           antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte
           receptor) (Rosette receptor)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 306 RPTNSSFDLVNPNSGPPSLRPRAERKPLXGA 398
           RP   S   V+   GPP  RPR + KP  GA
Sbjct: 311 RPPAPSGTQVHQQKGPPLPRPRVQPKPPHGA 341

to top

>SIL1_HUMAN (Q9H173) Nucleotide exchange factor SIL1 precursor (BiP-associated|
           protein) (BAP)
          Length = 461

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +3

Query: 219 PVSMLSCASAPLPVMISPMMEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERK 383
           P S+ S   APL +++  +M      C S      F L NP         R E K
Sbjct: 3   PQSLPSSRMAPLGMLLGLLMAACFTFCLSHQNLKEFALTNPEKSSTKETERKETK 57

to top

>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)|
          Length = 963

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 318 SSFDLVNPNSGPPSLRPRAERKP 386
           S +D VN N GPPS RPR    P
Sbjct: 111 SGYDFVNDN-GPPSSRPRKPEPP 132

to top

>MUTS_VIBPA (Q87LQ9) DNA mismatch repair protein mutS|
          Length = 853

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -1

Query: 322 ELFVGRLAQLGIAFSI---IGEIITGKGALAQLNIETGVPISXIEPLVLXXVVXFFIAAI 152
           E ++ +L QLG + +I   IG+  T KG + +  +    P +  +  +L   +   IAAI
Sbjct: 74  EGYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERLDNLIAAI 133

Query: 151 NPGTGKF 131
               GKF
Sbjct: 134 YHHNGKF 140

to top

>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 21/97 (21%), Positives = 34/97 (35%)
 Frame = +3

Query: 96   PVPIXXXXXPLMNLPVPGLMAAXXXXXXXXXXXXXXXXXXXPVSMLSCASAPLPVMISPM 275
            P P+      + N+PVP ++ +                   P S  S A  P P   +P 
Sbjct: 1479 PAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQ 1538

Query: 276  MEKAXPSCASRPTNSSFDLVNPNSGPPSLRPRAERKP 386
               A  + +S P ++S     P+   P       +KP
Sbjct: 1539 HPSAA-ALSSAPADNSM----PHRSSPYAPQEPVQKP 1570

to top

>VATB_TRYCO (Q26976) Vacuolar ATP synthase subunit B (EC 3.6.3.14) (V-ATPase B|
           subunit) (Vacuolar proton pump B subunit)
          Length = 485

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = -1

Query: 385 GFRSALGLSEGGPLFGFTKSNELFVGRLAQLGIAFSIIGEIITGKGALAQLNIETGVPI 209
           G ++ + + EG       +S   F G++ +LG++  ++G +  G G    + I+ G P+
Sbjct: 71  GDKAVVQVFEGTSGIDVMRSKCEFTGKVMELGVSEDMLGRVFNGSG----IPIDDGPPV 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,533,314
Number of Sequences: 219361
Number of extensions: 544722
Number of successful extensions: 2094
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 2051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2094
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result