ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62p02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 490 bits (247), Expect = e-135 Identities = 383/427 (89%), Gaps = 1/427 (0%) Strand = Plus / Minus Query: 167 aatctaggcagactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagat 226 |||||||| |||||||||||||||||||||||| ||||| || | ||| | ||| ||||| Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813 Query: 227 gtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacat 286 ||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 1812 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1753 Query: 287 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 346 ||||||||||||||||||||||||||| || || ||||||||||||| |||||| ||||| Sbjct: 1752 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacaaaggcctg 1693 Query: 347 ctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 406 ||| |||||||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct: 1692 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1633 Query: 407 cgagcagttgtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagt 466 ||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||| Sbjct: 1632 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttc-agcgagt 1574 Query: 467 ccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 526 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1573 ccaccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctca 1514 Query: 527 gcacctcaatctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtg 586 | | ||||||||| |||||||| || |||| ||| |||||||| ||||||| ||||| | Sbjct: 1513 ggatctcaatctgagccatcatcagggcaatgtacactccagcagtgaaggcatggagcg 1454 Query: 587 ggccaag 593 ||||||| Sbjct: 1453 ggccaag 1447
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 482 bits (243), Expect = e-133 Identities = 382/427 (89%), Gaps = 1/427 (0%) Strand = Plus / Minus Query: 167 aatctaggcagactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagat 226 |||||||| |||||||||||||||||||||||| ||||| || | ||| | ||| ||||| Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721 Query: 227 gtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacat 286 ||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 1720 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1661 Query: 287 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 346 ||||||||||||||||||||||||||| || || ||||||||||||| ||| || ||||| Sbjct: 1660 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacgaaggcctg 1601 Query: 347 ctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 406 ||| |||||||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct: 1600 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1541 Query: 407 cgagcagttgtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagt 466 ||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||| Sbjct: 1540 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttc-agcgagt 1482 Query: 467 ccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 526 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1481 ccaccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctca 1422 Query: 527 gcacctcaatctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtg 586 | | ||||||||| |||||||| || |||| ||| |||||||| ||||||| ||||| | Sbjct: 1421 ggatctcaatctgagccatcatcagggcaatgtacactccagcagtgaaggcatggagcg 1362 Query: 587 ggccaag 593 ||||||| Sbjct: 1361 ggccaag 1355
>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full insert sequence Length = 1153 Score = 454 bits (229), Expect = e-124 Identities = 371/417 (88%), Gaps = 1/417 (0%) Strand = Plus / Minus Query: 177 gactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 236 |||||||||||||| ||||||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924 Query: 237 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 296 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 923 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 864 Query: 297 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 356 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 863 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 804 Query: 357 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 416 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 803 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 744 Query: 417 tccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactc 476 || |||||||||||||| ||||| ||||||||||| |||||| || |||||||| ||||| Sbjct: 743 tcaaccatgaaggccactccacgagcatgcatgaaggggttc-agtgagtccacggactc 685 Query: 477 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaat 536 ||| |||||||||||||||||||| |||||||||||||||||||| || || ||||| || Sbjct: 684 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 625 Query: 537 ctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 ||| |||||||| ||||||||||| |||||||| |||||||| || || |||||||| Sbjct: 624 ctgagccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaag 568
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 454 bits (229), Expect = e-124 Identities = 371/417 (88%), Gaps = 1/417 (0%) Strand = Plus / Minus Query: 177 gactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 236 |||||||||||||| ||||||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736 Query: 237 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 296 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 1735 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 1676 Query: 297 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 356 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 1675 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 1616 Query: 357 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 416 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 1615 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 1556 Query: 417 tccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactc 476 || |||||||||||||| ||||| ||||||||||| |||||| || |||||||| ||||| Sbjct: 1555 tcaaccatgaaggccactccacgagcatgcatgaaggggttc-agtgagtccacggactc 1497 Query: 477 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaat 536 ||| |||||||||||||||||||| |||||||||||||||||||| || || ||||| || Sbjct: 1496 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 1437 Query: 537 ctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 ||| |||||||| ||||||||||| |||||||| |||||||| || || |||||||| Sbjct: 1436 ctgagccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaag 1380
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 400 bits (202), Expect = e-108 Identities = 323/362 (89%), Gaps = 1/362 (0%) Strand = Plus / Plus Query: 177 gactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 236 |||||||||||||| ||||||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400 Query: 237 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 296 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 143401 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 143460 Query: 297 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 356 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 143461 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 143520 Query: 357 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 416 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 143521 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 143580 Query: 417 tccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactc 476 || |||||||||||||| ||||| ||||||||||| |||||| || |||||||| ||||| Sbjct: 143581 tcaaccatgaaggccactccacgagcatgcatgaaggggttc-agtgagtccacggactc 143639 Query: 477 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaat 536 ||| |||||||||||||||||||| |||||||||||||||||||| || || ||||| || Sbjct: 143640 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 143699 Query: 537 ct 538 || Sbjct: 143700 ct 143701 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 541 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||||||| ||||||||||| |||||||| |||||||| || || |||||||| Sbjct: 143820 gccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaag 143872
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 400 bits (202), Expect = e-108 Identities = 323/362 (89%), Gaps = 1/362 (0%) Strand = Plus / Plus Query: 177 gactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 236 |||||||||||||| ||||||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158 Query: 237 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 296 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 28359159 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 28359218 Query: 297 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 356 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 28359219 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 28359278 Query: 357 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 416 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 28359279 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 28359338 Query: 417 tccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactc 476 || |||||||||||||| ||||| ||||||||||| |||||| || |||||||| ||||| Sbjct: 28359339 tcaaccatgaaggccactccacgagcatgcatgaaggggttc-agtgagtccacggactc 28359397 Query: 477 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaat 536 ||| |||||||||||||||||||| |||||||||||||||||||| || || ||||| || Sbjct: 28359398 gatgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgat 28359457 Query: 537 ct 538 || Sbjct: 28359458 ct 28359459 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 541 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||||||| ||||||||||| |||||||| |||||||| || || |||||||| Sbjct: 28359578 gccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaag 28359630
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 353 bits (178), Expect = 4e-94 Identities = 359/418 (85%), Gaps = 1/418 (0%) Strand = Plus / Minus Query: 176 agactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 235 |||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || || Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707 Query: 236 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 295 ||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 1706 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1647 Query: 296 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 355 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 1646 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1587 Query: 356 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 415 |||||| |||||||| || ||||||||||| || |||| || || || || |||||||| Sbjct: 1586 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1527 Query: 416 gtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgact 475 || |||||||||||||| || || |||||||||||||||||||| ||||||||| |||| Sbjct: 1526 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaa-cgagtccacggact 1468 Query: 476 cgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaa 535 |||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||||| Sbjct: 1467 cgatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaa 1408 Query: 536 tctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||| |||||||| |||||||| || |||||||| |||||||| || ||||||||||| Sbjct: 1407 tctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggccaag 1350
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 353 bits (178), Expect = 4e-94 Identities = 359/418 (85%), Gaps = 1/418 (0%) Strand = Plus / Minus Query: 176 agactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 235 |||||| || ||||| || |||||||| |||||||| || ||||| |||||||| || || Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718 Query: 236 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 295 ||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 1717 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1658 Query: 296 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 355 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 1657 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1598 Query: 356 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 415 |||||| |||||||| || ||||||||||| || |||| || || || || |||||||| Sbjct: 1597 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1538 Query: 416 gtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgact 475 || |||||||||||||| || || |||||||||||||||||||| ||||||||| |||| Sbjct: 1537 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaa-cgagtccacggact 1479 Query: 476 cgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaa 535 |||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||||| Sbjct: 1478 cgatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaa 1419 Query: 536 tctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||| |||||||| |||||||| || |||||||| |||||||| || ||||||||||| Sbjct: 1418 tctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggccaag 1361
>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence Length = 1029 Score = 337 bits (170), Expect = 2e-89 Identities = 357/418 (85%), Gaps = 1/418 (0%) Strand = Plus / Minus Query: 176 agactgccggagctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 235 |||||| || ||||| ||||||||||| ||||||| || ||||| |||||||| || || Sbjct: 817 agactgtcgaagctctgggcgcacgaaatcagcatgagcggtcactgagatgtcaacagt 758 Query: 236 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 295 ||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 757 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 698 Query: 296 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 355 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 697 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 638 Query: 356 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 415 |||||| |||||||| || ||||| ||||| || |||| || || || || |||||||| Sbjct: 637 gatgtaatcgaagcgtggtgcccatttcctagatcccaaacgagcagttgtggagcagtt 578 Query: 416 gtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgact 475 || |||||||||||||| || || |||||||||||||||||||| ||||||||| |||| Sbjct: 577 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaa-cgagtccacggact 519 Query: 476 cgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaa 535 |||||| | |||| || || ||||| ||||| ||||| ||||||||||| || ||||||| Sbjct: 518 cgatcagggtctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaa 459 Query: 536 tctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||| |||||||| |||||||| || |||||||| |||||||| || ||||||||||| Sbjct: 458 tctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggccaag 401
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 238 bits (120), Expect = 2e-59 Identities = 337/408 (82%), Gaps = 1/408 (0%) Strand = Plus / Minus Query: 186 agctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 245 ||||| || ||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 1730 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1671 Query: 246 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 305 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 1670 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1611 Query: 306 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 365 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 1610 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1551 Query: 366 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 425 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 1550 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1491 Query: 426 aaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactcgatcacgct 485 |||||||||||||| || |||||||| |||||| || || ||||| |||||||||| || Sbjct: 1490 aaggccaccccacgagcgtgcatgaatgggttc-agggaatccacagactcgatcaaact 1432 Query: 486 ctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaatctgggccat 545 ||||||||||||||| ||||| ||||| |||||||| || || || |||||||| ||||| Sbjct: 1431 ctcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccat 1372 Query: 546 cataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||||||||||| || |||||||| ||||| || || | ||||||||| Sbjct: 1371 cataagtgcaacatacactccagcagtgaaaggatgtaatgggccaag 1324
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 238 bits (120), Expect = 2e-59 Identities = 337/408 (82%), Gaps = 1/408 (0%) Strand = Plus / Minus Query: 186 agctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 245 ||||| || ||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 1681 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1622 Query: 246 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 305 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 1621 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1562 Query: 306 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 365 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 1561 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1502 Query: 366 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 425 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 1501 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1442 Query: 426 aaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactcgatcacgct 485 |||||||||||||| || |||||||| |||||| || || ||||| |||||||||| || Sbjct: 1441 aaggccaccccacgagcgtgcatgaatgggttc-agggaatccacagactcgatcaaact 1383 Query: 486 ctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaatctgggccat 545 ||||||||||||||| ||||| ||||| |||||||| || || || |||||||| ||||| Sbjct: 1382 ctcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccat 1323 Query: 546 cataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 |||||||||||| || |||||||| ||||| || || | ||||||||| Sbjct: 1322 cataagtgcaacatacactccagcagtgaaaggatgtaatgggccaag 1275
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 192 bits (97), Expect = 9e-46 Identities = 290/353 (82%), Gaps = 1/353 (0%) Strand = Plus / Minus Query: 186 agctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 245 ||||| || ||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 26389122 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 26389063 Query: 246 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 305 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 26389062 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 26389003 Query: 306 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 365 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 26389002 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 26388943 Query: 366 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 425 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 26388942 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 26388883 Query: 426 aaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactcgatcacgct 485 |||||||||||||| || |||||||| |||||| || || ||||| |||||||||| || Sbjct: 26388882 aaggccaccccacgagcgtgcatgaatgggttc-agggaatccacagactcgatcaaact 26388824 Query: 486 ctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaatct 538 ||||||||||||||| ||||| ||||| |||||||| || || || ||||||| Sbjct: 26388823 ctcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatct 26388771 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 541 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 ||||||||||||||||| || |||||||| ||||| || || | ||||||||| Sbjct: 26388671 gccatcataagtgcaacatacactccagcagtgaaaggatgtaatgggccaag 26388619
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 192 bits (97), Expect = 9e-46 Identities = 290/353 (82%), Gaps = 1/353 (0%) Strand = Plus / Minus Query: 186 agctccgggcgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 245 ||||| || ||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 62987 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 62928 Query: 246 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 305 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 62927 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 62868 Query: 306 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 365 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 62867 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 62808 Query: 366 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 425 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 62807 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 62748 Query: 426 aaggccaccccacgcgcatgcatgaacgggttcaagcgagtccactgactcgatcacgct 485 |||||||||||||| || |||||||| |||||| || || ||||| |||||||||| || Sbjct: 62747 aaggccaccccacgagcgtgcatgaatgggttc-agggaatccacagactcgatcaaact 62689 Query: 486 ctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcaatct 538 ||||||||||||||| ||||| ||||| |||||||| || || || ||||||| Sbjct: 62688 ctcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatct 62636 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 541 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaag 593 ||||||||||||||||| || |||||||| ||||| || || | ||||||||| Sbjct: 62536 gccatcataagtgcaacatacactccagcagtgaaaggatgtaatgggccaag 62484
>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA, complete cds Length = 2087 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1851 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1792 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1791 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1732 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1731 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1672 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1671 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1612 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1611 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1553 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1552 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1493 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1492 aactccagcggtgaaggg 1475
>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase (At3g58610/F14P22_200) mRNA, complete cds Length = 1776 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1742 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1683 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1682 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1623 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1622 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1563 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1562 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1503 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1502 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1444 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1443 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1384 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1383 aactccagcggtgaaggg 1366
>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2028 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1792 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1733 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1732 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1673 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1672 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1613 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1612 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1553 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1552 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1494 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1493 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1434 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1433 aactccagcggtgaaggg 1416
>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1807 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1742 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1683 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1682 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1623 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1622 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1563 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1562 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1503 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1502 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1444 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1443 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1384 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1383 aactccagcggtgaaggg 1366
>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2058 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1851 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1792 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1791 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1732 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1731 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1672 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1671 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1612 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1611 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1553 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1552 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1493 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1492 aactccagcggtgaaggg 1475
>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1996 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1788 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1729 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1728 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1669 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1668 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1609 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1608 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1549 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1548 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1490 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1489 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1430 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1429 aactccagcggtgaaggg 1412
>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds Length = 1990 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1786 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1727 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1726 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1667 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1666 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1607 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1606 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1547 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1546 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1488 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1487 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1428 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1427 aactccagcggtgaaggg 1410
>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete cds, clone: RAFL22-45-C07 Length = 1266 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1064 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1005 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1004 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 945 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 944 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 885 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 884 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 825 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 824 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 766 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 765 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 706 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 705 aactccagcggtgaaggg 688
>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete cds Length = 1980 Score = 147 bits (74), Expect = 5e-32 Identities = 303/378 (80%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1788 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1729 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1728 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1669 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1668 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1609 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1608 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1549 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1548 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1490 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1489 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1430 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1429 aactccagcggtgaaggg 1412
>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit Length = 1966 Score = 145 bits (73), Expect = 2e-31 Identities = 287/357 (80%), Gaps = 1/357 (0%) Strand = Plus / Minus Query: 222 gagatgtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtcc 281 ||||| || ||||| ||||| |||| ||||||||||| ||||| || ||||| || || Sbjct: 1745 gagatatcaacggtaggcctgagctgtgcgcagacctcaatggcaccatggactggatca 1686 Query: 282 gacatgaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaac 341 || | |||||| ||||| ||||| |||||| | ||| | ||||||| | ||||| Sbjct: 1685 gagaagaagttactgattaggtctctgttgattgctgcaccactgtccacagccacaaga 1626 Query: 342 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 401 || || ||||||||||||||||| || || |||||||| |||||||| |||| | || Sbjct: 1625 gcttgttgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgct 1566 Query: 402 gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaag 461 || || ||||||||||| |||||||||| ||| || | || ||||| || ||||| | | Sbjct: 1565 gtggttgagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggttta-g 1507 Query: 462 cgagtccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttctt 521 |||||||| || || ||||| |||||||||||||| || ||||| |||||||| ||||| Sbjct: 1506 agagtccacggattcaatcacactctcgttgatgatttctgagtaagagtgacctttctt 1447 Query: 522 cctcagcacctcaatctgggccatcataagtgcaacgtaaactccagccgtgaaggg 578 ||||| | ||||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 1446 cctcaagatctcaatctgagccatcataagtgctacataaactccagcggtgaaggg 1390
>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1983 Score = 131 bits (66), Expect = 3e-27 Identities = 301/378 (79%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1803 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1744 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1743 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1684 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1683 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1624 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || Sbjct: 1623 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccgtg 1564 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| | ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 1563 gcgtgcataagtgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 1505 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcataagtgcaacgta 560 ||||| |||||||| |||||||||| | ||||||||| |||||||||||||| || || Sbjct: 1504 tgagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacata 1445 Query: 561 aactccagccgtgaaggg 578 ||||||||| |||||||| Sbjct: 1444 aactccagcggtgaaggg 1427
>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase Length = 2036 Score = 127 bits (64), Expect = 4e-26 Identities = 233/288 (80%), Gaps = 1/288 (0%) Strand = Plus / Minus Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || Sbjct: 1658 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 1599 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||| || |||||||| || || ||||| || || | ||| ||||| Sbjct: 1598 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 1539 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 ||||| || |||| || || || || ||||||||||| |||||||| | || || || Sbjct: 1538 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 1479 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 ||||||||||| || ||||| || || || ||||||||||| ||||| || ||||| || Sbjct: 1478 gcatgcatgaatggattcaaa-gaatcaacagactcgatcacactctcattaatgatttc 1420 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgggccatcat 548 |||||| || || ||||||||||||| |||||||||||||||||||| Sbjct: 1419 agagtaagaatgccccttcttcctcaagacctcaatctgggccatcat 1372
>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons 1-9 Length = 3343 Score = 111 bits (56), Expect = 3e-21 Identities = 225/280 (80%), Gaps = 1/280 (0%) Strand = Plus / Minus Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || Sbjct: 3013 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 2954 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||| || |||||||| || || ||||| || || | ||| ||||| Sbjct: 2953 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 2894 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 ||||| || |||| || || || || ||||||||||| |||||||| | || || || Sbjct: 2893 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 2834 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 ||||||||||| || ||||| || || || ||||||||||| ||||| || ||||| || Sbjct: 2833 gcatgcatgaatggattcaaa-gaatcaacagactcgatcacactctcattaatgatttc 2775 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgg 540 |||||| || || ||||||||||||| |||||||||||| Sbjct: 2774 agagtaagaatgccccttcttcctcaagacctcaatctgg 2735
>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase Length = 2050 Score = 111 bits (56), Expect = 3e-21 Identities = 141/168 (83%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 408 gagcagttgtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaagcgagtc 467 ||||||||||| ||||| || | || || || ||||||||||| ||||||||| || || Sbjct: 1581 gagcagttgtcaaccataaatgagacaccccgggcatgcatgaaggggttcaag-gaatc 1523 Query: 468 cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 527 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1522 cactgcttcaatcacactctcgttgatgatctccgagtacgagtgacccttcttcctcaa 1463 Query: 528 cacctcaatctgggccatcataagtgcaacgtaaactccagccgtgaa 575 | ||| |||||||||||||| || ||||| || || ||||| ||||| Sbjct: 1462 gatctctatctgggccatcattagagcaacatagacaccagcagtgaa 1415
>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase Length = 4395 Score = 99.6 bits (50), Expect = 1e-17 Identities = 258/326 (79%), Gaps = 1/326 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 4127 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 4068 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 4067 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 4008 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 4007 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 3948 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 3947 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 3888 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 3887 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 3829 Query: 501 agagtaggagtgacccttcttcctca 526 ||||| |||||||| |||||||||| Sbjct: 3828 tgagtaagagtgacctttcttcctca 3803 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 541 gccatcataagtgcaacgtaaactccagccgtgaaggg 578 |||||||||||||| || ||||||||||| |||||||| Sbjct: 3441 gccatcataagtgctacataaactccagcggtgaaggg 3404
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 99.6 bits (50), Expect = 1e-17 Identities = 258/326 (79%), Gaps = 1/326 (0%) Strand = Plus / Minus Query: 201 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 260 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 68106 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 68047 Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 68046 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 67987 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 67986 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 67927 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 67926 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 67867 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 || ||||| || ||||| | | |||||||| || || ||||| |||||||||||||| || Sbjct: 67866 gcgtgcataaatgggttta-gagagtccacggattcaatcacactctcgttgatgatttc 67808 Query: 501 agagtaggagtgacccttcttcctca 526 ||||| |||||||| |||||||||| Sbjct: 67807 tgagtaagagtgacctttcttcctca 67782 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 541 gccatcataagtgcaacgtaaactccagccgtgaaggg 578 |||||||||||||| || ||||||||||| |||||||| Sbjct: 67420 gccatcataagtgctacataaactccagcggtgaaggg 67383
>gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds Length = 1257 Score = 93.7 bits (47), Expect = 6e-16 Identities = 114/135 (84%), Gaps = 1/135 (0%) Strand = Plus / Minus Query: 342 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 401 ||||||| |||||||||||||||||||| || |||||||| | || ||||| || || Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071 Query: 402 gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcatgcatgaacgggttcaag 461 ||||| |||||||||||||||||| |||| || || || || |||||| |||||||| || Sbjct: 1070 gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttc-ag 1012 Query: 462 cgagtccactgactc 476 ||||||||| ||||| Sbjct: 1011 cgagtccacagactc 997
>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence Length = 106771 Score = 87.7 bits (44), Expect = 4e-14 Identities = 222/280 (79%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| ||||| || ||||| ||||||||||||||||| | |||||||||||| || || Sbjct: 73387 atggctccgtgcactgggtctgacatgaagttgctgattaagtcctggttgataggagct 73446 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 | |||||||| | ||| || |||||||| || ||||| || || || | ||| ||||| Sbjct: 73447 ccattgtccactgccaccaaagcctgctgagttaggatataatcaaatctgggggcccat 73506 Query: 381 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 440 ||||| || || | || || || || ||||||||||| |||||||| | || || || Sbjct: 73507 ttccttgaacctaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccccga 73566 Query: 441 gcatgcatgaacgggttcaagcgagtccactgactcgatcacgctctcgttgatgatctc 500 ||||||||||| || ||||| || || ||||| |||||||| ||||| || ||||| || Sbjct: 73567 gcatgcatgaatggattcaa-agaatcaactgattcgatcacactctcattaatgatttc 73625 Query: 501 agagtaggagtgacccttcttcctcagcacctcaatctgg 540 |||||| || || || |||||||||| | |||||||||| Sbjct: 73626 agagtaagaatgtcctttcttcctcaagatctcaatctgg 73665
>gb|AC027251.6| Homo sapiens chromosome 8, clone RP11-14G5, complete sequence Length = 130377 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 509 agtgacccttcttcctcagcacctcaa 535 ||||| ||||||||||||||||||||| Sbjct: 36169 agtgatccttcttcctcagcacctcaa 36195
>gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomerase precursor-like protein, mRNA, partial sequence Length = 258 Score = 44.1 bits (22), Expect = 0.52 Identities = 99/125 (79%) Strand = Plus / Minus Query: 261 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 320 ||||| ||||| || ||||| |||| |||||||||||| | || ||||||||||| | Sbjct: 169 atggcaccgtgcaccgggtctgacaggaagttgctgatcngatcttggttgatgggggtg 110 Query: 321 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 380 |||| || || | ||| || ||||| ||||| |||||||| ||||| || || ||||| Sbjct: 109 cccttatcaactgccaccaaagcctgttgggtaaggatgtaatcgaatcgaggggcccat 50 Query: 381 ttcct 385 ||||| Sbjct: 49 ttcct 45
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 gaagttgctgatgaggtcctg 307 ||||||||||||||||||||| Sbjct: 46822 gaagttgctgatgaggtcctg 46842
>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence Length = 209946 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 gaagttgctgatgaggtcctg 307 ||||||||||||||||||||| Sbjct: 107699 gaagttgctgatgaggtcctg 107719
>dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630008E23 product:mitogen activated protein kinase kinase kinase 4, full insert sequence Length = 3816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 gaagttgctgatgaggtcctg 307 ||||||||||||||||||||| Sbjct: 2783 gaagttgctgatgaggtcctg 2803
>gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188196 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 agtgacccttcttcctcagca 529 ||||||||||||||||||||| Sbjct: 36870 agtgacccttcttcctcagca 36850
>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete sequence Length = 229125 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 acacagcagctcacaggttcaaaca 99 ||||||||||||||||||| ||||| Sbjct: 144182 acacagcagctcacaggtttaaaca 144158
>gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete sequence Length = 214372 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 gaagttgctgatgaggtcctg 307 ||||||||||||||||||||| Sbjct: 151591 gaagttgctgatgaggtcctg 151611
>gb|AC154000.4| Mus musculus 6 BAC RP24-313C5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 agtgacccttcttcctcagca 529 ||||||||||||||||||||| Sbjct: 39352 agtgacccttcttcctcagca 39372
>ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104 (LOC430549), partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ctgacacagcagctcacagg 91 |||||||||||||||||||| Sbjct: 279 ctgacacagcagctcacagg 298
>ref|NM_029621.1| Mus musculus RIKEN cDNA 2410004L22 gene (2410004L22Rik), mRNA Length = 1454 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctcagcacctcaatctgggc 542 |||||||||||||||||||| Sbjct: 722 ctcagcacctcaatctgggc 703
>gb|BC003935.1| Mus musculus RIKEN cDNA 2410004L22 gene, mRNA (cDNA clone MGC:7326 IMAGE:3486472), complete cds Length = 1485 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctcagcacctcaatctgggc 542 |||||||||||||||||||| Sbjct: 705 ctcagcacctcaatctgggc 686
>ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Forkhead-related activator-1) (LOC589400), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 catgaagttgctgatgaggt 303 |||||||||||||||||||| Sbjct: 206 catgaagttgctgatgaggt 187
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 388 accccagccgggccgtcgtcgagc 411 ||||| |||||||||||||||||| Sbjct: 24366 acccccgccgggccgtcgtcgagc 24343
>gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, complete cds Length = 1772 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tgatgaggtcctggttgatg 314 |||||||||||||||||||| Sbjct: 1575 tgatgaggtcctggttgatg 1556
>dbj|AK161850.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330415K05 product:weakly similar to Sarcoma antigen NY-SAR-48 (Fragment) [Homo sapiens], full insert sequence Length = 3992 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctcagcacctcaatctgggc 542 |||||||||||||||||||| Sbjct: 696 ctcagcacctcaatctgggc 677
>dbj|AK010398.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410004L22 product:hypothetical protein, full insert sequence Length = 1454 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctcagcacctcaatctgggc 542 |||||||||||||||||||| Sbjct: 722 ctcagcacctcaatctgggc 703
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 agtgacccttcttcctcagc 528 |||||||||||||||||||| Sbjct: 145642 agtgacccttcttcctcagc 145661
>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence Length = 184959 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 acacagcagctcacaggttcaaac 98 |||||||||| ||||||||||||| Sbjct: 108353 acacagcagcacacaggttcaaac 108376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,063,161 Number of Sequences: 3902068 Number of extensions: 4063161 Number of successful extensions: 68691 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68525 Number of HSP's gapped (non-prelim): 122 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
