ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UREE_RHOS4 (Q3J156) Urease accessory protein ureE 29 3.7
2ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog) 28 8.3
3ENPL_ARATH (Q9STX5) Endoplasmin homolog precursor (GRP94 homolog... 28 8.3

>UREE_RHOS4 (Q3J156) Urease accessory protein ureE|
          Length = 182

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 394 HDRGQEQGAPHLDHALRHVHRQGRPLQDHLQDA 296
           HD G  QG  H DH   HVH   +P +D   DA
Sbjct: 148 HDHGPAQGHGH-DHPHVHVHISHKPDEDETPDA 179



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>ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)|
          Length = 817

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +2

Query: 266 ETGKVLPSPVGVLKVILEGSSLSMNMSQSVIQMRSSL 376
           E  ++LP  +  LK +++  +L +N+S+ ++Q  SSL
Sbjct: 432 EFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSL 468



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>ENPL_ARATH (Q9STX5) Endoplasmin homolog precursor (GRP94 homolog) (Protein|
           SHEPHERD) (HSP90-like protein 7)
          Length = 823

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +2

Query: 266 ETGKVLPSPVGVLKVILEGSSLSMNMSQSVIQMRSSL 376
           E  ++LP  +  LK +++  +L +N+S+ ++Q  SSL
Sbjct: 428 EFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSL 464


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,813,510
Number of Sequences: 219361
Number of extensions: 620939
Number of successful extensions: 1541
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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