Clone Name | rbah63e06 |
---|---|
Clone Library Name | barley_pub |
>gb|AF493562.1| Hordeum vulgare subsp. vulgare sucrose-phosphatase mRNA, complete cds Length = 1583 Score = 1106 bits (558), Expect = 0.0 Identities = 561/562 (99%) Strand = Plus / Minus Query: 1 ctggggtcatttactttagtttagcctctcatgacagcatcaagagacatcatccagtct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1520 ctggggtcatttactttagtttagcctctcatgacagcatcaagagacatcatccagtct 1461 Query: 61 agtatatgtatgtgtctgggagcacttattaacattatatgaacaagtaaaaaagaaatt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 agtatatgtatgtgtctgggagcacttattaacattatatgaacaagtaaaaaagaaatt 1401 Query: 121 cacatgctttcggtacgatttcttatttcatcctcaagaagaaaaaactcctccccatgc 180 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 cacatgcttccggtacgatttcttatttcatcctcaagaagaaaaaactcctccccatgc 1341 Query: 181 gccggccggcggtctagagtttggacgactgctcaaccccgggatattctttgcgccatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 gccggccggcggtctagagtttggacgactgctcaaccccgggatattctttgcgccatg 1281 Query: 241 tcttgtggatgtgtgttaccacgaaacccccggggttttcaggctttacactcagcgcaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1280 tcttgtggatgtgtgttaccacgaaacccccggggttttcaggctttacactcagcgcaa 1221 Query: 301 gagttgtaaaacagcacacccacgcatcaccttctgcctcccacaagtcgaatctcacga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 gagttgtaaaacagcacacccacgcatcaccttctgcctcccacaagtcgaatctcacga 1161 Query: 361 gccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtactttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1160 gccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtactttt 1101 Query: 421 tcccttgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaagtt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1100 tcccttgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaagtt 1041 Query: 481 cgaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtagtcta 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 cgaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtagtcta 981 Query: 541 taactgaatcagcctttggaac 562 |||||||||||||||||||||| Sbjct: 980 taactgaatcagcctttggaac 959
>gb|AF321556.1|AF321556 Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP1 mRNA, complete cds Length = 1700 Score = 664 bits (335), Expect = 0.0 Identities = 465/504 (92%), Gaps = 12/504 (2%) Strand = Plus / Minus Query: 69 tatgtgtctgggagcacttattaacattat-atgaacaagtaaaaaagaaattcacatgc 127 ||||||||||||||||||||||| | || |||||||||||||| ||||||| ||||| Sbjct: 1566 tatgtgtctgggagcacttattattaagattatgaacaagtaaaa--gaaattctcatgc 1509 Query: 128 tttcggtacgatttcttatttcatcctcaagaagaa--aaaactcctccccatgcgccgg 185 ||||| ||||||||||||||| |||||||||||||| ||||||||| ||| |||||||| Sbjct: 1508 tttcgctacgatttcttatttgatcctcaagaagaagaaaaactccttcccgtgcgccgg 1449 Query: 186 ccg--gcggtc-----tagagtttggacgactgctcaaccccgggatattctttgcgcca 238 | | |||||| ||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 1448 cggtggcggtccagtctagagtttggatgactgctcgaccccgggatattctttacgcca 1389 Query: 239 tgtcttgtggatgtgtgttaccacgaaacccccggggttttcaggctttacactcagcgc 298 |||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||| || Sbjct: 1388 tgtcttgtggatgtgtgttaccacaaaacccccaggggtttcaggctttacattcagtgc 1329 Query: 299 aagagttgtaaaacagcacacccacgcatcaccttctgcctcccacaagtcgaatctcac 358 ||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 1328 aagggttgtaaaacagcacgcccacgcattaccttctgcctcccacaagtcgaatctcac 1269 Query: 359 gagccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtactt 418 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1268 aagccaactgtcaggagcagtctgcaagataacaagtctgtccacccatgatcggtactt 1209 Query: 419 tttcccttgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaag 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1208 tttcccttgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaag 1149 Query: 479 ttcgaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtagtc 538 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 1148 ttcgaccccagacggatgaataataactccatttgcatctgtggtgtttttgaagtactc 1089 Query: 539 tataactgaatcagcctttggaac 562 |||||| ||||||||||||||||| Sbjct: 1088 tataacagaatcagcctttggaac 1065 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1 ctggggtcatttactttagtttagcctctcatgacag 37 |||||||||||||||| |||||||||||||||||||| Sbjct: 1657 ctggggtcatttacttcagtttagcctctcatgacag 1621
>gb|AY029159.1| Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP3 mRNA, complete cds Length = 1743 Score = 662 bits (334), Expect = 0.0 Identities = 460/497 (92%), Gaps = 10/497 (2%) Strand = Plus / Minus Query: 69 tatgtgtctgggagcacttattaacattat-atgaacaagtaaaaaagaaattcacatgc 127 |||| ||||||||||||||||||||| || |||||||||||||| ||||||| | ||| Sbjct: 1512 tatgcgtctgggagcacttattaacaacattatgaacaagtaaaa--gaaattcgcgtgc 1455 Query: 128 tttcggtac--gatttcttatttcatcctcaagaagaaaaaactcctccccatgcgccgg 185 ||||||||| |||||||||||| |||||||| ||||||| ||||| |||||||||| Sbjct: 1454 tttcggtacacgatttcttatttgatcctcaacaagaaaac-ctccttcccatgcgcctc 1396 Query: 186 ccggcggtctagagtttggacgactgctcaaccccgggatattctttgcgccatgtcttg 245 | | ||||||||||||| |||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1395 cag----tctagagtttggatgactgctcgaccccgggatattctttacgccacgtcttg 1340 Query: 246 tggatgtgtgttaccacgaaacccccggggttttcaggctttacactcagcgcaagagtt 305 || |||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 1339 tgaatgtgtgttaccacaaaacccccaggggattcaggctttacattcagcgcaagagtt 1280 Query: 306 gtaaaacagcacacccacgcatcaccttctgcctcccacaagtcgaatctcacgagccaa 365 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 1279 gtaaaacagcacacccacgcagcaccttctgcctcccacaagtcgaatctcacaagccaa 1220 Query: 366 ctgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtactttttccct 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1219 ctgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtactttttccct 1160 Query: 426 tgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaagttcgacc 485 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1159 tgtttgtcaccataacatgaagccagctcatcaatggatgaatggatcgaaagttcgacc 1100 Query: 486 ccagacggatgaataataactccatttgcatctgtgatgtttttgaagtagtctataact 545 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1099 ccagacggatgaataataactccatttgcatctgtgatgtttttgaagtactgtataact 1040 Query: 546 gaatcagcctttggaac 562 ||||||||||||||||| Sbjct: 1039 gaatcagcctttggaac 1023 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 1 ctggggtcatttactttagtttagcctctcatgaca 36 |||||||||||||||||||||||||||||||||||| Sbjct: 1610 ctggggtcatttactttagtttagcctctcatgaca 1575
>gb|AF493559.1| Aegilops speltoides sucrose-phosphatase mRNA, complete cds Length = 1766 Score = 662 bits (334), Expect = 0.0 Identities = 462/501 (92%), Gaps = 14/501 (2%) Strand = Plus / Minus Query: 69 tatgtgtctgggagcacttattaacattat-atgaacaagtaaaaaagaaattcacatgc 127 |||||||||||||||||||||||||| || || |||||||||| ||||||| | ||| Sbjct: 1574 tatgtgtctgggagcacttattaacaacattatcaacaagtaaac--gaaattcgcgtgc 1517 Query: 128 tttcggtac------gatttcttatttcatcctcaagaagaaaaaactcctccccatgcg 181 ||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 1516 tttcggtacacacacgatttcttatttgatcctcaagaagaaaaa-ctccttcccatgcg 1458 Query: 182 ccggccggcggtctagagtttggacgactgctcaaccccgggatattctttgcgccatgt 241 || | | ||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1457 cctccag----tctagagtttggatgactgctcgaccccgggatattctttacgccatgt 1402 Query: 242 cttgtggatgtgtgttaccacgaaacccccggggttttcaggctttacactcagcgcaag 301 ||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||| Sbjct: 1401 cttgtggatgtgtgttaccacaaaacccccaggggattcaggctttacagtcagcgcaag 1342 Query: 302 agttgtaaaacagcacacccacgcatcaccttctgcctcccacaagtcgaatctcacgag 361 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 1341 agttgtaaaacagcacacccacgcagcaccttctgcctcccacaagtcgaatctcacaag 1282 Query: 362 ccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtacttttt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1281 ccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtacttttt 1222 Query: 422 cccttgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaagttc 481 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1221 cccttgtttgtcaccataacatgaagccagctcatcaatggatgaatggattgaaagttc 1162 Query: 482 gaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtagtctat 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 1161 gaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtactgtat 1102 Query: 542 aactgaatcagcctttggaac 562 ||||||||||||||||||||| Sbjct: 1101 aactgaatcagcctttggaac 1081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 1 ctggggtcatttactttagtttagcctctcatgaca 36 |||||||||||||||||||||||||||||||||||| Sbjct: 1670 ctggggtcatttactttagtttagcctctcatgaca 1635
>gb|AF493560.1| Secale cereale sucrose-phosphatase mRNA, complete cds Length = 1664 Score = 622 bits (314), Expect = e-175 Identities = 457/501 (91%), Gaps = 14/501 (2%) Strand = Plus / Minus Query: 69 tatgtgtctgggagcacttattaacattatatgaacaagtaaaaaagaaattcacatgct 128 |||||||||||||||||||||| ||||||| |||||||| ||| ||||||| |||||| Sbjct: 1505 tatgtgtctgggagcacttattgacattat--gaacaagttaaa--gaaattctcatgct 1450 Query: 129 ttcggtac-----gatttcttatttcatcctcaagaagaaaaaa--ctcctccccatgcg 181 |||||||| |||||||||||| |||||| ||| ||| ||| ||||| |||||||| Sbjct: 1449 ttcggtactacacgatttcttatttgatcctcgagacgaagaaaacctccttcccatgcg 1390 Query: 182 ccggccggcggtctagagtttggacgactgctcaaccccgggatattctttgcgccatgt 241 | || | ||||||||||||| || ||||| |||||||||||||||| ||||||| Sbjct: 1389 cgatccag---tctagagtttggatgattgctcggccccgggatattctttatgccatgt 1333 Query: 242 cttgtggatgtgtgttaccacgaaacccccggggttttcaggctttacactcagcgcaag 301 ||||||||||||||||||||| ||| |||| ||| |||||||||||||| |||||||||| Sbjct: 1332 cttgtggatgtgtgttaccacaaaaaccccaggggtttcaggctttacattcagcgcaag 1273 Query: 302 agttgtaaaacagcacacccacgcatcaccttctgcctcccacaagtcgaatctcacgag 361 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || Sbjct: 1272 agttgtaaaacagcacgcccacgcagcaccttctgcctcccacaagtcgaatctcacaag 1213 Query: 362 ccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtacttttt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 ccaactgtcagaagcagtctgcaagataactagtctgtccacccatgatcggtacttttt 1153 Query: 422 cccttgtttgtcaccataacatgaagccagctcatcaatggacgaatggatcgaaagttc 481 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1152 cccttgtttgtcaccataacatgaagccagctcaccaatggacgaatggatcggaagttc 1093 Query: 482 gaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtagtctat 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1092 aaccccagacggatgaataataactccatttgcatctgtgatgtttttgaagtactctat 1033 Query: 542 aactgaatcagcctttggaac 562 ||||||||||||||||||||| Sbjct: 1032 aactgaatcagcctttggaac 1012 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 5 ggtcatttactttagtttagcctctcatgacag 37 ||||||||||||||||||||||||||||||||| Sbjct: 1608 ggtcatttactttagtttagcctctcatgacag 1576
>gb|AF321557.1|AF321557 Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP2 mRNA, complete cds Length = 1665 Score = 609 bits (307), Expect = e-171 Identities = 355/371 (95%) Strand = Plus / Minus Query: 192 gtctagagtttggacgactgctcaaccccgggatattctttgcgccatgtcttgtggatg 251 |||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 1400 gtctagagtttgcatgactgctcgaccccgggatattctttacgccatgtcttgtggatg 1341 Query: 252 tgtgttaccacgaaacccccggggttttcaggctttacactcagcgcaagagttgtaaaa 311 ||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 1340 tgtgttaccacaaaacccccaggggtttcaggctttacattcagcgcaagagttgtaaaa 1281 Query: 312 cagcacacccacgcatcaccttctgcctcccacaagtcgaatctcacgagccaactgtca 371 |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1280 cagcacgcccacgcagcaccttctgcctcccacaagtcgaatctcacaagccaactgtca 1221 Query: 372 gaagcagtctgcaagataactagtctgtccacccatgatcggtactttttcccttgtttg 431 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1220 gaagcagtctgcaagataactagtctgtccacccatgaccggtactttttcccttgtttg 1161 Query: 432 tcaccataacatgaagccagctcatcaatggacgaatggatcgaaagttcgaccccagac 491 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1160 tcaccataacatgaagcgagctcatcaatggccgaatggatcgaaagttcgaccccagac 1101 Query: 492 ggatgaataataactccatttgcatctgtgatgtttttgaagtagtctataactgaatca 551 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 1100 ggatgaataataactccatttgcatctgtgatgtttttgaagtactgtataactgaatca 1041 Query: 552 gcctttggaac 562 ||||||||||| Sbjct: 1040 gcctttggaac 1030 Score = 97.6 bits (49), Expect = 4e-17 Identities = 114/132 (86%), Gaps = 9/132 (6%) Strand = Plus / Minus Query: 37 gcatcaagagacatcatccagtctagtatatgtatgtgtctgggagcacttattaacatt 96 |||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||| Sbjct: 1547 gcatcaagagacgtcatccagtccagtatgtgt----gtctgggagcacttattaacaac 1492 Query: 97 a-tatgaacaagtaaaaaagaaattcacatgctttcggt--acgatttcttatttcatcc 153 | ||||||||||| |||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 1491 attatgaacaagt--gaaagaaattcccatgctttcggtacacgatttcttatttgatcc 1434 Query: 154 tcaagaagaaaa 165 |||||| ||||| Sbjct: 1433 tcaagaggaaaa 1422 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 9 atttactttagtttagcctctcatgacag 37 ||||||||||||||||||||||||||||| Sbjct: 1605 atttactttagtttagcctctcatgacag 1577
>ref|NM_193876.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1272 Score = 202 bits (102), Expect = 9e-49 Identities = 231/274 (84%) Strand = Plus / Minus Query: 277 tttcaggctttacactcagcgcaagagttgtaaaacagcacacccacgcatcaccttctg 336 |||||||||||||| ||||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 1186 tttcaggctttacattcagcgcaagacttgtcaaacagcacaaccgcgcatcaccttctg 1127 Query: 337 cctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgcaagataactagtc 396 ||||||||||||| ||||| || ||||||||||| ||| ||| ||| ||| || ||||| Sbjct: 1126 cctcccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtc 1067 Query: 397 tgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagctcat 456 |||||||||||| |||||| |||||||||||||| ||||||||||||||| || ||| Sbjct: 1066 tgtccacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcat 1007 Query: 457 caatggacgaatggatcgaaagttcgaccccagacggatgaataataactccatttgcat 516 ||| || | ||||| ||| ||| | |||||| || ||||| ||||| |||||||||| Sbjct: 1006 caacagaggcatggagagaacattcaagcccagaaggttgaatgataacaccatttgcat 947 Query: 517 ctgtgatgtttttgaagtagtctataactgaatc 550 ||||| ||||||||||| | || ||||||||| Sbjct: 946 gagtgatatttttgaagtactgtacaactgaatc 913
>dbj|AK071525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K18, full insert sequence Length = 1610 Score = 202 bits (102), Expect = 9e-49 Identities = 231/274 (84%) Strand = Plus / Minus Query: 277 tttcaggctttacactcagcgcaagagttgtaaaacagcacacccacgcatcaccttctg 336 |||||||||||||| ||||||||||| |||| |||||||||| || |||||||||||||| Sbjct: 1305 tttcaggctttacattcagcgcaagacttgtcaaacagcacaaccgcgcatcaccttctg 1246 Query: 337 cctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgcaagataactagtc 396 ||||||||||||| ||||| || ||||||||||| ||| ||| ||| ||| || ||||| Sbjct: 1245 cctcccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtc 1186 Query: 397 tgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagctcat 456 |||||||||||| |||||| |||||||||||||| ||||||||||||||| || ||| Sbjct: 1185 tgtccacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcat 1126 Query: 457 caatggacgaatggatcgaaagttcgaccccagacggatgaataataactccatttgcat 516 ||| || | ||||| ||| ||| | |||||| || ||||| ||||| |||||||||| Sbjct: 1125 caacagaggcatggagagaacattcaagcccagaaggttgaatgataacaccatttgcat 1066 Query: 517 ctgtgatgtttttgaagtagtctataactgaatc 550 ||||| ||||||||||| | || ||||||||| Sbjct: 1065 gagtgatatttttgaagtactgtacaactgaatc 1032
>gb|DQ092445.1| Saccharum officinarum sucrose phosphate phosphatase mRNA, complete cds Length = 1520 Score = 186 bits (94), Expect = 5e-44 Identities = 202/238 (84%) Strand = Plus / Minus Query: 325 catcaccttctgcctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgca 384 |||||||||||| ||||||||||| |||||||| | |||||| || ||| ||||||| Sbjct: 1163 catcaccttctgattcccacaagtcaaatctcaccacccaactatctgaaccagtctgtg 1104 Query: 385 agataactagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatg 444 |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1103 tgatagcaagtctgtccacccatgctcggtactttttcccttgtttgtcaccataacatg 1044 Query: 445 aagccagctcatcaatggacgaatggatcgaaagttcgaccccagacggatgaataataa 504 | ||| |||||||||| | ||||| || ||||| | ||||| ||||| || |||| Sbjct: 1043 atcccaatgcatcaatggatgcatggagtgagagttcaagcccagcaggatggatgataa 984 Query: 505 ctccatttgcatctgtgatgtttttgaagtagtctataactgaatcagcctttggaac 562 |||||||||||| ||||||||||||||||| | |||||||||||||| ||| ||||| Sbjct: 983 ctccatttgcatgagtgatgtttttgaagtactttataactgaatcagacttgggaac 926
>gb|AF283564.2|AF283564 Zea mays sucrose-phosphatase (spp1) mRNA, complete cds Length = 1564 Score = 170 bits (86), Expect = 3e-39 Identities = 200/238 (84%) Strand = Plus / Minus Query: 325 catcaccttctgcctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgca 384 |||||||||||| ||||||||||| || ||| | | |||||| || ||| ||||||| Sbjct: 1215 catcaccttctgattcccacaagtcaaacctccccacccaactatctgaaccagtctgtg 1156 Query: 385 agataactagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatg 444 ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 1155 tgataaaaagtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatg 1096 Query: 445 aagccagctcatcaatggacgaatggatcgaaagttcgaccccagacggatgaataataa 504 | ||| | |||||||||| | ||||| || ||||| | ||||| ||||| || ||| Sbjct: 1095 atcccaacgcatcaatggatgcatggagtgagagttcaagcccagcaggatggatggtaa 1036 Query: 505 ctccatttgcatctgtgatgtttttgaagtagtctataactgaatcagcctttggaac 562 |||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||| Sbjct: 1035 ctccatttgcatgagtgatgtttttgaagtactttataactgaatcagactttggaac 978
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 329 accttctgcctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgcaagat 388 ||||||||||||||||||||| ||||| || ||||||||||| ||| ||| ||| ||| Sbjct: 15552247 accttctgcctcccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagac 15552306 Query: 389 aactagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaa 446 || ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct: 15552307 aaatagtctgtccacccatgttcggtattttttcccttgtttctcaccataacatgaa 15552364 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 284 ctttacactcagcgcaagagttgtaaaacagcacacccacgcatcacct 332 ||||||| ||||||||||| |||| |||||||||| || |||||||||| Sbjct: 15551296 ctttacattcagcgcaagacttgtcaaacagcacaaccgcgcatcacct 15551344
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 329 accttctgcctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgcaagat 388 ||||||||||||||||||||| ||||| || ||||||||||| ||| ||| ||| ||| Sbjct: 109756 accttctgcctcccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagac 109815 Query: 389 aactagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatgaa 446 || ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct: 109816 aaatagtctgtccacccatgttcggtattttttcccttgtttctcaccataacatgaa 109873 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 284 ctttacactcagcgcaagagttgtaaaacagcacacccacgcatcacct 332 ||||||| ||||||||||| |||| |||||||||| || |||||||||| Sbjct: 108805 ctttacattcagcgcaagacttgtcaaacagcacaaccgcgcatcacct 108853
>ref|XM_464125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 229 ctttgcgccatgtcttgtggatgtgtgttaccacgaaacccccggggttttcaggcttta 288 ||||| ||||||| ||||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 1379 ctttgagccatgttttgtggatgtgtgttaccacgaagccctcgggggtttcaggcttcg 1320 Query: 289 cactcagcgcaagagttgtaaaacagcacacccacgcatcaccttctgcctcccacaagt 348 || |||| |||||| |||| | ||| ||| |||| |||||||||| ||||||||||| Sbjct: 1319 cattcagtgcaagacttgtcagacaacacgaccacacatcaccttccaactcccacaagt 1260 Query: 349 cgaatctcacgagccaactgtcagaagcagtctgcaagataactagtctgtccacccatg 408 |||||||| ||||||| || ||| || || ||| ||| |||||||||||||||| Sbjct: 1259 taaatctcaccagccaaccctctgaaccacattgtgagacaaccagtctgtccacccatg 1200 Query: 409 atcggtactttttcccttgtttgtcaccataacatga 445 || ||| || ||||||||||||||||| |||||||| Sbjct: 1199 ctctgtatttcttcccttgtttgtcaccgtaacatga 1163 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 492 ggatgaataataactccatttgcatctgtgatgtttttgaagtagtctataactgaatca 551 ||||||||||||||||||||||||| || || |||||||| || | | |||| |||||| Sbjct: 1116 ggatgaataataactccatttgcatgagttatatttttgaaatactgtgtaaccgaatca 1057 Query: 552 gcctttggaac 562 | ||||||||| Sbjct: 1056 gactttggaac 1046
>dbj|AK063330.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A01, full insert sequence Length = 1686 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Minus Query: 229 ctttgcgccatgtcttgtggatgtgtgttaccacgaaacccccggggttttcaggcttta 288 ||||| ||||||| ||||||||||||||||||||||| ||| ||||| |||||||||| Sbjct: 1379 ctttgagccatgttttgtggatgtgtgttaccacgaagccctcgggggtttcaggcttcg 1320 Query: 289 cactcagcgcaagagttgtaaaacagcacacccacgcatcaccttctgcctcccacaagt 348 || |||| |||||| |||| | ||| ||| |||| |||||||||| ||||||||||| Sbjct: 1319 cattcagtgcaagacttgtcagacaacacgaccacacatcaccttccaactcccacaagt 1260 Query: 349 cgaatctcacgagccaactgtcagaagcagtctgcaagataactagtctgtccacccatg 408 |||||||| ||||||| || ||| || || ||| ||| |||||||||||||||| Sbjct: 1259 taaatctcaccagccaaccctctgaaccacattgtgagacaaccagtctgtccacccatg 1200 Query: 409 atcggtactttttcccttgtttgtcaccataacatga 445 || ||| || ||||||||||||||||| |||||||| Sbjct: 1199 ctctgtatttcttcccttgtttgtcaccgtaacatga 1163 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 492 ggatgaataataactccatttgcatctgtgatgtttttgaagtagtctataactgaatca 551 ||||||||||||||||||||||||| || || |||||||| || | | |||| |||||| Sbjct: 1116 ggatgaataataactccatttgcatgagttatatttttgaaatactgtgtaaccgaatca 1057 Query: 552 gcctttggaac 562 | ||||||||| Sbjct: 1056 gactttggaac 1046
>gb|AY109736.1| Zea mays CL1134_1 mRNA sequence Length = 1533 Score = 127 bits (64), Expect = 4e-26 Identities = 192/238 (80%) Strand = Plus / Minus Query: 325 catcaccttctgcctcccacaagtcgaatctcacgagccaactgtcagaagcagtctgca 384 |||||||||||| ||||||||||| || ||| | | |||||| || ||| ||||||| Sbjct: 1223 catcaccttctgattcccacaagtcaaacctccccacccaactatctgaaccagtctgtg 1164 Query: 385 agataactagtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatg 444 ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 1163 tgatnnnnngtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatg 1104 Query: 445 aagccagctcatcaatggacgaatggatcgaaagttcgaccccagacggatgaataataa 504 | ||| | |||||||||| | ||||| || ||||| | ||||| ||||| || ||| Sbjct: 1103 atcccaacgcatcaatggatgcatggagtgagagttcaagcccagcaggatggatggtaa 1044 Query: 505 ctccatttgcatctgtgatgtttttgaagtagtctataactgaatcagcctttggaac 562 |||||||||||| |||||| |||||| | |||||||||||||| ||||||||| Sbjct: 1043 ctccatttgcatgagtgatgnnnnngaagtactttataactgaatcagactttggaac 986
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 229 ctttgcgccatgtcttgtggatgtgtgttaccacgaaacccccggggttttcaggct 285 ||||| ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||| Sbjct: 2394036 ctttgagccatgttttgtggatgtgtgttaccacgaagccctcgggggtttcaggct 2393980 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 393 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 445 |||||||||||||||| || ||| || ||||||||||||||||| |||||||| Sbjct: 2392066 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatga 2392014 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 492 ggatgaataataactccatttgcat 516 ||||||||||||||||||||||||| Sbjct: 2391967 ggatgaataataactccatttgcat 2391943
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 229 ctttgcgccatgtcttgtggatgtgtgttaccacgaaacccccggggttttcaggct 285 ||||| ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||| Sbjct: 9957 ctttgagccatgttttgtggatgtgtgttaccacgaagccctcgggggtttcaggct 9901 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 393 agtctgtccacccatgatcggtactttttcccttgtttgtcaccataacatga 445 |||||||||||||||| || ||| || ||||||||||||||||| |||||||| Sbjct: 7987 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatga 7935 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 492 ggatgaataataactccatttgcat 516 ||||||||||||||||||||||||| Sbjct: 7888 ggatgaataataactccatttgcat 7864
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 actcctccccatgcgccggccggcgg 192 ||||||||||||||||||| |||||| Sbjct: 1250409 actcctccccatgcgccggacggcgg 1250434
>gb|AC115789.9| Mus musculus chromosome 18, clone RP23-398N2, complete sequence Length = 206108 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 gtttgtcaccataacatgaag 447 ||||||||||||||||||||| Sbjct: 191705 gtttgtcaccataacatgaag 191685
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 399 tccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagctcatca 458 ||||||||| |||| |||| || |||||||| ||| ||||||||||| ||| ||||| Sbjct: 21853 tccacccatactcggaacttcttgccttgtttatcagcataacatgaactcagtgcatca 21794 Query: 459 atgga 463 ||||| Sbjct: 21793 atgga 21789
>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence Length = 201262 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctctcatgacagcatcaagag 46 ||||||||||||||||||||| Sbjct: 113306 ctctcatgacagcatcaagag 113286
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete sequence Length = 206180 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 agtatatgtatgtgtctggga 81 ||||||||||||||||||||| Sbjct: 40450 agtatatgtatgtgtctggga 40430
>gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence Length = 188544 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 tctcatgacagcatcaagaga 47 ||||||||||||||||||||| Sbjct: 120294 tctcatgacagcatcaagaga 120314
>gb|AC116489.6| Mus musculus chromosome 18, clone RP24-137L16, complete sequence Length = 198242 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 gtttgtcaccataacatgaag 447 ||||||||||||||||||||| Sbjct: 173480 gtttgtcaccataacatgaag 173500
>emb|AL353638.15| Human DNA sequence from clone RP11-338L20 on chromosome 9 Contains a ribosomal protein S26 pseudogene 3 and part the 5' UTR of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 161067 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 124 atgctttcggtacgatttcttatttcatcctca 156 ||||||| ||||| |||||||||||||||||| Sbjct: 127850 atgctttgggtacattttcttatttcatcctca 127818
>dbj|AK157321.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830211A09 product:unclassifiable, full insert sequence Length = 2287 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ctctcatgacagcatcaagag 46 ||||||||||||||||||||| Sbjct: 1690 ctctcatgacagcatcaagag 1670
>gb|AC153820.4| Mus musculus 6 BAC RP23-459L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180996 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 534 tagtctataactgaatcagcctttg 558 ||||| ||||||||||||||||||| Sbjct: 43974 tagtccataactgaatcagcctttg 43998
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 399 tccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagctcatca 458 ||||||||| |||| |||| || |||||||| ||| ||||||||||| ||| ||||| Sbjct: 2536967 tccacccatactcggaacttcttgccttgtttatcagcataacatgaactcagtgcatca 2536908 Query: 459 atgga 463 ||||| Sbjct: 2536907 atgga 2536903
>dbj|AK064563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-D01, full insert sequence Length = 1952 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 399 tccacccatgatcggtactttttcccttgtttgtcaccataacatgaagccagctcatca 458 ||||||||| |||| |||| || |||||||| ||| ||||||||||| ||| ||||| Sbjct: 1479 tccacccatactcggaacttcttgccttgtttatcagcataacatgaactcagtgcatca 1420 Query: 459 atgga 463 ||||| Sbjct: 1419 atgga 1415
>gb|AC154382.1| Mus musculus BAC clone RP23-51D17 from 13, complete sequence Length = 180348 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 cacacccacgcatcaccttctgcct 339 ||||| ||||||||||||||||||| Sbjct: 27274 cacacacacgcatcaccttctgcct 27298
>gb|AC024913.33| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence Length = 197831 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 tagtctataactgaatcagcctttg 558 ||||| ||||||||||||||||||| Sbjct: 98555 tagtccataactgaatcagcctttg 98531
>ref|NM_128589.2| Arabidopsis thaliana CIPK11; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G30360 (CIPK11) mRNA, complete cds Length = 1856 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 413 atcctcaacaagaaaaaactcctc 436
>gb|AC164302.2| Mus musculus BAC clone RP23-286N12 from chromosome 16, complete sequence Length = 192765 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 atttgcatctgtgatgtttt 528 |||||||||||||||||||| Sbjct: 159502 atttgcatctgtgatgtttt 159483
>gb|AY522969.1| Colinus virginianus clone A-4B microsatellite sequence Length = 297 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aaagaaattcacatgctttc 131 |||||||||||||||||||| Sbjct: 3 aaagaaattcacatgctttc 22
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ttctttgcgccatgtcttgt 246 |||||||||||||||||||| Sbjct: 1187931 ttctttgcgccatgtcttgt 1187950
>gb|AC124727.4| Mus musculus BAC clone RP23-465O22 from chromosome 3, complete sequence Length = 181528 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 atttgcatctgtgatgtttt 528 |||||||||||||||||||| Sbjct: 111436 atttgcatctgtgatgtttt 111455
>emb|AL592293.7| Human DNA sequence from clone RP11-54D18 on chromosome 9 Contains a lactate dehdrogenase A (LDHA) (LOC158222) pseudogene, a novel pseudogene (FLJ20543), a pseudogene similar to part of chloride channel 3 (CLCN3) (CLC3), a pseudogene similar to part of PC4 and SFRS1 interacting protein 2 (PSIP2) and a CpG island, complete sequence Length = 157574 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 505 ctccatttgcatctgtgatgtttttgaa 532 |||||| ||||| ||||||||||||||| Sbjct: 155730 ctccatatgcatttgtgatgtttttgaa 155757
>emb|AL512785.7| Human DNA sequence from clone RP11-565P22 on chromosome 1 Contains two novel genes, the 3' end of the gene for C-terminal PDZ domain ligand of neuronal nitric oxide synthase (CAPON), a novel gene (LOC284680), the EAT2 gene for SH2 domain-containing molecule EAT2 and a CpG island, complete sequence Length = 116882 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cttattaacattatatgaac 104 |||||||||||||||||||| Sbjct: 16672 cttattaacattatatgaac 16691
>emb|AL445650.9| Human DNA sequence from clone RP11-152K20 on chromosome 1 Contains the 5' end of the USH2A gene for Usher syndrome 2A (autosomal recessive, mild) and the 3' end of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 153705 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 tcatcaatggacgaatggat 472 |||||||||||||||||||| Sbjct: 122982 tcatcaatggacgaatggat 123001
>emb|AL390958.15| Human DNA sequence from clone RP11-271D19 on chromosome 9, complete sequence Length = 65791 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 505 ctccatttgcatctgtgatgtttttgaa 532 |||||| ||||| ||||||||||||||| Sbjct: 157 ctccatatgcatttgtgatgtttttgaa 184
>emb|AL139010.29| Human DNA sequence from clone RP11-444M10 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the KIRREL gene for kin of IRRE like (Drosophila), complete sequence Length = 189477 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 aataataactccatttgcat 516 |||||||||||||||||||| Sbjct: 165681 aataataactccatttgcat 165700
>emb|AL021367.1|HS443E24 Human DNA sequence from clone RP3-443E24 on chromosome 6q16 Contains the 3' end of a novel gene, complete sequence Length = 139350 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 catttgcatctgtgatgtttttga 531 ||||||||||||| |||||||||| Sbjct: 106944 catttgcatctgttatgtttttga 106921
>emb|AL009029.1|HS164C20 Human DNA sequence from clone RP1-164C20 on chromosome 6q16.1-22.1, complete sequence Length = 161475 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 tcatcaatggacgaatggat 472 |||||||||||||||||||| Sbjct: 49409 tcatcaatggacgaatggat 49390
>gb|AE014243.1| Streptococcus agalactiae 2603V/R section 53 of 100 of the complete genome Length = 21358 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ttctttgcgccatgtcttgt 246 |||||||||||||||||||| Sbjct: 10658 ttctttgcgccatgtcttgt 10677
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 acaagtaaaaaagaaattca 122 |||||||||||||||||||| Sbjct: 69436 acaagtaaaaaagaaattca 69455
>emb|AL766849.1|SAG766849 Streptococcus agalactiae NEM316 complete genome, segment 7 Length = 128050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ttctttgcgccatgtcttgt 246 |||||||||||||||||||| Sbjct: 50258 ttctttgcgccatgtcttgt 50277
>gb|AC087417.27| Mus musculus strain C57BL/6J chromosome 2 clone rp23-382b13, complete sequence Length = 225248 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cttatttcatcctcaagaagaaaa 165 ||||||||||||| |||||||||| Sbjct: 189335 cttatttcatcctgaagaagaaaa 189358
>emb|CR388176.8| Zebrafish DNA sequence from clone DKEY-109D19 in linkage group 21, complete sequence Length = 159175 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 ttttgaagtagtctataactgaat 549 ||||||| |||||||||||||||| Sbjct: 136100 ttttgaaatagtctataactgaat 136123
>gb|AC084117.6| Homo sapiens chromosome 11, clone RP11-107C21, complete sequence Length = 166973 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ttcttatttcatcctcaaga 159 |||||||||||||||||||| Sbjct: 82211 ttcttatttcatcctcaaga 82230
>dbj|AK094163.1| Homo sapiens cDNA FLJ36844 fis, clone ASTRO2012601 Length = 2354 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 aataataactccatttgcat 516 |||||||||||||||||||| Sbjct: 1745 aataataactccatttgcat 1764
>gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9 map m283, complete sequence Length = 79272 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 54201 atcctcaacaagaaaaaactcctc 54178
>dbj|AK163113.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730001H12 product:Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Fragment) homolog [Bos taurus], full insert sequence Length = 3017 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 atttgcatctgtgatgtttt 528 |||||||||||||||||||| Sbjct: 2999 atttgcatctgtgatgtttt 2980
>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence Length = 159838 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 tcatcctcaagaagaaaaaa 167 |||||||||||||||||||| Sbjct: 30849 tcatcctcaagaagaaaaaa 30830
>gb|AF428398.1|AF428398 Arabidopsis thaliana At2g30360/T9D9.17 mRNA, complete cds Length = 1641 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 310 atcctcaacaagaaaaaactcctc 333
>gb|BT006582.1| Arabidopsis thaliana At2g30360 mRNA, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 151 atcctcaacaagaaaaaactcctc 174
>gb|AF339146.1|AF339146 Arabidopsis thaliana SOS2-like protein kinase PKS5 mRNA, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 151 atcctcaacaagaaaaaactcctc 174
>gb|AF370595.1|AF370595 Arabidopsis thaliana putative protein kinase (At2g30360; T9D9.17) mRNA, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 151 atcctcaacaagaaaaaactcctc 174
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 acaagtaaaaaagaaattca 122 |||||||||||||||||||| Sbjct: 16819005 acaagtaaaaaagaaattca 16819024
>gb|AF295666.1|AF295666 Arabidopsis thaliana CBL-interacting protein kinase 11 (CIPK11) mRNA, partial cds Length = 1308 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 151 atcctcaacaagaaaaaactcctc 174
>emb|BX827083.1|CNS0A38T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1512 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 1072 atcctcaacaagaaaaaactcctc 1049
>gb|AC107078.4| Homo sapiens BAC clone RP11-582N16 from 2, complete sequence Length = 31946 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 tataactgaatcagcctttg 558 |||||||||||||||||||| Sbjct: 24451 tataactgaatcagcctttg 24470
>gb|AC068048.6| Homo sapiens BAC clone RP11-263D19 from 2, complete sequence Length = 101713 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 acaagtaaaaaagaaattca 122 |||||||||||||||||||| Sbjct: 31647 acaagtaaaaaagaaattca 31666
>gb|BT002478.1| Arabidopsis thaliana putative protein kinase (At2g30360) mRNA, complete cds Length = 1886 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 atcctcaagaagaaaaaactcctc 173 |||||||| ||||||||||||||| Sbjct: 413 atcctcaacaagaaaaaactcctc 436
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence Length = 267826 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 atgaataataactccatttg 513 |||||||||||||||||||| Sbjct: 93909 atgaataataactccatttg 93928
>emb|BX927389.19| Zebrafish DNA sequence from clone DKEY-190L1 in linkage group 19, complete sequence Length = 75588 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 atttcttatttcatcctcaa 157 |||||||||||||||||||| Sbjct: 70949 atttcttatttcatcctcaa 70968
>emb|AL935332.12| Zebrafish DNA sequence from clone DKEY-77F17 in linkage group 18, complete sequence Length = 139084 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 atgaataataactccatttg 513 |||||||||||||||||||| Sbjct: 29480 atgaataataactccatttg 29499
>emb|BX296562.4| Zebrafish DNA sequence from clone CH211-260G14 in linkage group 20, complete sequence Length = 129328 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 ttaacattatatgaacaagtaaaa 112 ||||||||||||| |||||||||| Sbjct: 28192 ttaacattatatggacaagtaaaa 28215
>gb|AY108157.1| Zea mays PCO068552 mRNA sequence Length = 733 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcatgacagcatcaagagac 48 |||||||||||||||||||| Sbjct: 522 tcatgacagcatcaagagac 541
>gb|AC107633.11| Mus musculus chromosome 12, clone RP23-7P3, complete sequence Length = 202640 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagagacatcatccagtct 60 |||||||||||||||||||| Sbjct: 190914 caagagacatcatccagtct 190933
>emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chromosome 16, complete sequence Length = 229346 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 atttgcatctgtgatgtttt 528 |||||||||||||||||||| Sbjct: 226370 atttgcatctgtgatgtttt 226389
>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete sequence Length = 183349 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cttatttcatcctcaagaagaaaa 165 ||||||||||||| |||||||||| Sbjct: 5685 cttatttcatcctgaagaagaaaa 5708
>gb|AC158398.2| Mus musculus BAC clone RP23-63H11 from chromosome 12, complete sequence Length = 171334 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caagagacatcatccagtct 60 |||||||||||||||||||| Sbjct: 71865 caagagacatcatccagtct 71846
>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete sequence Length = 172327 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 agcctctcatgacagcatcaagag 46 |||||||||||||||||| ||||| Sbjct: 50687 agcctctcatgacagcataaagag 50710
>emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chromosome 2, complete sequence Length = 213625 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cttatttcatcctcaagaagaaaa 165 ||||||||||||| |||||||||| Sbjct: 45362 cttatttcatcctgaagaagaaaa 45385
>emb|AL772406.4| Mouse DNA sequence from clone RP23-321K16 on chromosome 4, complete sequence Length = 151744 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tgaacaagtaaaaaagaaat 119 |||||||||||||||||||| Sbjct: 103701 tgaacaagtaaaaaagaaat 103682 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,249,669 Number of Sequences: 3902068 Number of extensions: 6249669 Number of successful extensions: 127731 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127373 Number of HSP's gapped (non-prelim): 347 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)