ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63d24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009459.1| Triticum aestivum clone wlsu2.pk0003.a5:fis, full... 137 5e-29
2ref|NM_120112.2| Arabidopsis thaliana GTP binding AT4G39520 mRNA... 72 3e-09
3gb|AY035034.1| Arabidopsis thaliana putative GTP-binding protein... 72 3e-09
4emb|BX827633.1|CNS0A3PN Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
5emb|BX829215.1|CNS0A3J3 Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
6emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, ... 70 1e-08
7emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, B... 70 1e-08
8gb|AY109675.1| Zea mays CL822_1 mRNA sequence 68 4e-08
9ref|XM_479223.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
10dbj|AK066361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
12dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
13gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete se... 54 6e-04
14gb|CP000081.1| Leishmania major chromosome 35, complete sequence 48 0.037
15ref|XM_838539.1| Leishmania major strain Friedlin GTP-binding pr... 48 0.037
16gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, compl... 44 0.59
17gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosom... 44 0.59
18ref|NM_101609.2| Arabidopsis thaliana ATDRG1 (ARABIDOPSIS THALIA... 42 2.3
19gb|AC118931.8| Mus musculus chromosome 19, clone RP24-118A21, co... 42 2.3
20gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's ... 42 2.3
21emb|AL162418.17| Human DNA sequence from clone RP11-335H2 on chr... 42 2.3
22gb|AF370258.1| Arabidopsis thaliana putative developmentally reg... 42 2.3
23dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
24emb|BX815300.1|CNS0ADXZ Arabidopsis thaliana Full-length cDNA Co... 42 2.3
25emb|BX815499.1|CNS0ABD6 Arabidopsis thaliana Full-length cDNA Co... 42 2.3
26gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28... 42 2.3
27gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana... 42 2.3
28gb|BT021092.1| Arabidopsis thaliana At1g17470 gene, complete cds 42 2.3
29gb|U66408.1|ATU66408 Arabidopsis thaliana GTP-binding protein (A... 42 2.3
30gb|AF014822.1|AF014822 Arabidopsis thaliana developmentally regu... 42 2.3
31gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone ... 42 2.3
32gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
33emb|AL672056.4| Mouse DNA sequence from clone RP23-467O2 on chro... 42 2.3
34ref|NM_179119.2| Arabidopsis thaliana WRKY20; transcription fact... 40 9.1
35gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, com... 40 9.1
36gb|U89593.1|RNU89593 Rattus norvegicus microsatellite sequence D... 40 9.1
37gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosom... 40 9.1
38gb|AC158940.8| Mus musculus chromosome 1, clone RP24-284D7, comp... 40 9.1
39gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 40 9.1
40emb|AJ965606.1| Pisum sativum PDR1 retrotransposon partial left ... 40 9.1
41emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in... 40 9.1
42gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome... 40 9.1
43gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosom... 40 9.1
44emb|CR376783.22| Zebrafish DNA sequence from clone DKEY-41N20 in... 40 9.1
45gb|AC136139.24| Medicago truncatula clone mth2-22c2, complete se... 40 9.1
46emb|AL049635.8|HSJ1083G3 Human DNA sequence from clone RP5-1083G... 40 9.1
47gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's H... 40 9.1
48emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 40 9.1
49emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, B... 40 9.1
50emb|AJ237705.1|AGA237705 Anopheles gambiae apy gene for putative... 40 9.1
51emb|AJ237704.1|AGA237704 Anopheles gambiae mRNA for putative apy... 40 9.1
52gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell ... 40 9.1
53gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, com... 40 9.1
54gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, com... 40 9.1
55gb|AC117588.11| Mus musculus chromosome 15, clone RP23-177B8, co... 40 9.1
56emb|BX826663.1|CNS0A43T Arabidopsis thaliana Full-length cDNA Co... 40 9.1
57emb|BX827276.1|CNS0A2HA Arabidopsis thaliana Full-length cDNA Co... 40 9.1
58gb|AC107739.9| Mus musculus chromosome 7, clone RP23-345M1, comp... 40 9.1
59emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chr... 40 9.1
60emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in ... 40 9.1
61gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36... 40 9.1
62gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, comple... 40 9.1
63dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 9.1
64emb|AL713894.12| Mouse DNA sequence from clone RP23-48J18 on chr... 40 9.1
65emb|AL671520.6| Mouse DNA sequence from clone RP23-99G21 on chro... 40 9.1
66emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chr... 40 9.1
67emb|AL669891.12| Mouse DNA sequence from clone RP23-271F3 on chr... 40 9.1
68emb|AL513352.12| Mouse DNA sequence from clone RP23-180L12 on ch... 40 9.1
69gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Can... 40 9.1 
>gb|BT009459.1| Triticum aestivum clone wlsu2.pk0003.a5:fis, full insert mRNA
           sequence
          Length = 1142

 Score =  137 bits (69), Expect = 5e-29
 Identities = 125/139 (89%), Gaps = 6/139 (4%)
 Strand = Plus / Minus

                                                                       
Query: 532 tagctgcttctcaaaaagttccatagctgagagcttcttcctgatctgcaaaacaaaatc 591
           |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||
Sbjct: 844 tagctgcttctcaaaaagtttcatagctgagaactccttcctgatctgcaaaacagaatc 785

                                                                       
Query: 592 attgctcgcc-cca-ggtgtatagct-atattttcttaatgatctgaacaacatcctcgt 648
              ||||| | ||| ||||| ||||| ||||||||||||||||||||||||| |||||||
Sbjct: 784 ---gctcggcaccacggtgtgtagcttatattttcttaatgatctgaacaacgtcctcgt 728

                              
Query: 649 cctcaagctcatgttcctt 667
           ||||||||||||| |||||
Sbjct: 727 cctcaagctcatgctcctt 709



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 323  agaaccatcttatcaccttctcaagatagacaagcatctttccatgtgttcgg 375
            |||||||||||| || |||||| ||||||| | ||||||||||||||||||||
Sbjct: 1072 agaaccatcttagcatcttctcgagatagatatgcatctttccatgtgttcgg 1020



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 428 aaaaactgtccacattctgtctttcgatggaaacc-gggttttatgcaaacagcg 481
           |||||||||||||||| ||||||  ||| |||||| |  ||||||||||||||||
Sbjct: 949 aaaaactgtccacattttgtcttgtgatcgaaaccagatttttatgcaaacagcg 895
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>ref|NM_120112.2| Arabidopsis thaliana GTP binding AT4G39520 mRNA, complete cds
          Length = 1611

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 624  ttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1240 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctt 1197
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>gb|AY035034.1| Arabidopsis thaliana putative GTP-binding protein (At4g39520) mRNA,
            complete cds
          Length = 1474

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 624  ttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1239 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctt 1196
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>emb|BX827633.1|CNS0A3PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS87ZF10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1584

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 624  ttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1239 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctt 1196
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>emb|BX829215.1|CNS0A3J3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL81ZE07 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1407

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 624  ttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1211 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcctt 1168
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>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
          Length = 198151

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 624   ttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 666
             |||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 91509 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcct 91551
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>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project)
          Length = 129047

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 624   ttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 666
             |||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 66295 ttaacgatctgaacaacatcctcgtcctcaagctcgtgttcct 66337
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>gb|AY109675.1| Zea mays CL822_1 mRNA sequence
          Length = 1597

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                  
Query: 614  ctatattttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||||||||||||||||||||||| || ||||| || ||||||||||| |||||
Sbjct: 1261 ctatattttcttaatgatctgaacgacgtcctcatcgtcaagctcatgctcctt 1208
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>ref|XM_479223.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1548

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 620  tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||||| |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 1226 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttcctt 1179



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  aagcatctttccatgtgttc 373
            ||||||||||||||||||||
Sbjct: 1510 aagcatctttccatgtgttc 1491
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>dbj|AK066361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063L05, full
            insert sequence
          Length = 1548

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 620  tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcctt 667
            |||||| |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 1226 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttcctt 1179



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  aagcatctttccatgtgttc 373
            ||||||||||||||||||||
Sbjct: 1510 aagcatctttccatgtgttc 1491
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 620      tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 666
                |||||| |||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 25966338 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttcct 25966384



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 354      aagcatctttccatgtgttc 373
                ||||||||||||||||||||
Sbjct: 25966054 aagcatctttccatgtgttc 25966073
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>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506F02
          Length = 151612

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 620   tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 666
             |||||| |||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 43350 tttcttgatgatctggacaacgtcctcatcctcaagctcatgttcct 43396



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   aagcatctttccatgtgttc 373
             ||||||||||||||||||||
Sbjct: 43066 aagcatctttccatgtgttc 43085
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>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence
          Length = 113744

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 620   tttcttaatgatctgaacaacatcctcgtcctcaagctcatgttcct 666
             |||||| |||||||||||||| || ||||| ||||| ||||||||||
Sbjct: 81777 tttcttgatgatctgaacaacgtcttcgtcttcaagttcatgttcct 81731
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 627     atgatctgaacaacatcctcgtcctcaagctcatgt 662
               ||||| |||| ||||||||||||||| |||||||||
Sbjct: 2049450 atgatttgaagaacatcctcgtcctctagctcatgt 2049415
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>ref|XM_838539.1| Leishmania major strain Friedlin GTP-binding protein (LMJ_1459)
            partial mRNA
          Length = 1125

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 627  atgatctgaacaacatcctcgtcctcaagctcatgt 662
            ||||| |||| ||||||||||||||| |||||||||
Sbjct: 1103 atgatttgaagaacatcctcgtcctctagctcatgt 1068
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>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence
          Length = 210514

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 232  catcatcaaaatgacaaggtaa 253
            ||||||||||||||||||||||
Sbjct: 1352 catcatcaaaatgacaaggtaa 1331
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>gb|AC162908.4| Mus musculus BAC clone RP24-296A15 from chromosome 10, complete
             sequence
          Length = 170988

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 232   catcatcaaaatgacaaggtaa 253
             ||||||||||||||||||||||
Sbjct: 55796 catcatcaaaatgacaaggtaa 55775
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>ref|NM_101609.2| Arabidopsis thaliana ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY
            REGULATED G-PROTEIN 1); GTP binding AT1G17470 (ATDRG1)
            mRNA, complete cds
          Length = 1561

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 1213 ttttcttgacgatctgaacaacatcttcgtcttcaag 1177
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>gb|AC118931.8| Mus musculus chromosome 19, clone RP24-118A21, complete sequence
          Length = 233367

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 184    gaaaaatacacacaatacgtacaca 208
              ||||||||||||||| |||||||||
Sbjct: 110667 gaaaaatacacacaacacgtacaca 110643
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>gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 219287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 555    tagctgagagcttcttcctgatctgcaaa 583
              ||||||| |||||| ||||||||||||||
Sbjct: 214880 tagctgaaagcttcctcctgatctgcaaa 214908
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>emb|AL162418.17| Human DNA sequence from clone RP11-335H2 on chromosome 9 Contains part
             of the gene for a novel protein similar to basonuclin
             (BNC) (FLJ34928) and a LSM1 homolog, U6 small nuclear RNA
             associated (S. cerevisiae) pseudogene, complete sequence
          Length = 57850

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 325   aaccatcttatcaccttctca 345
             |||||||||||||||||||||
Sbjct: 19577 aaccatcttatcaccttctca 19597
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>gb|AF370258.1| Arabidopsis thaliana putative developmentally regulated GTP-binding
            protein (At1g17470) mRNA, complete cds
          Length = 1522

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 1213 ttttcttgacgatctgaacaacatcttcgtcttcaag 1177
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 561      agagcttcttcctgatctgca 581
                |||||||||||||||||||||
Sbjct: 23489893 agagcttcttcctgatctgca 23489873
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>emb|BX815300.1|CNS0ADXZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS4ZH11 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1448

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 1157 ttttcttgacgatctgaacaacatcttcgtcttcaag 1121
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>emb|BX815499.1|CNS0ABD6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS67ZF05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 843

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 619 ttttcttaatgatctgaacaacatcctcgtcctcaag 655
           ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 569 ttttcttgacgatctgaacaacatcttcgtcttcaag 533
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>gb|AC007843.6|AC007843 Arabidopsis thaliana chromosome I BAC F28G4 genomic sequence,
            complete sequence
          Length = 84974

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 9672 ttttcttgacgatctgaacaacatcttcgtcttcaag 9708
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>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I,
             complete sequence
          Length = 127968

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 619   ttttcttaatgatctgaacaacatcctcgtcctcaag 655
             ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 59686 ttttcttgacgatctgaacaacatcttcgtcttcaag 59650
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>gb|BT021092.1| Arabidopsis thaliana At1g17470 gene, complete cds
          Length = 1276

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 1112 ttttcttgacgatctgaacaacatcttcgtcttcaag 1076
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>gb|U66408.1|ATU66408 Arabidopsis thaliana GTP-binding protein (ATDRG1) mRNA, complete cds
          Length = 1493

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 1216 ttttcttgacgatctgaacaacatcttcgtcttcaag 1180
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>gb|AF014822.1|AF014822 Arabidopsis thaliana developmentally regulated GTP binding protein
            (AtDRG1) mRNA, complete cds
          Length = 1495

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 619  ttttcttaatgatctgaacaacatcctcgtcctcaag 655
            ||||||| | ||||||||||||||| ||||| |||||
Sbjct: 1202 ttttcttgacgatctgaacaacatcttcgtcttcaag 1166
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>gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-422n18, complete
             sequence
          Length = 188880

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 554   atagctgagagcttcttcctgatctgcaa 582
             ||||||||||||| | |||||||||||||
Sbjct: 65272 atagctgagagctacatcctgatctgcaa 65300
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 561   agagcttcttcctgatctgca 581
             |||||||||||||||||||||
Sbjct: 25617 agagcttcttcctgatctgca 25597
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>emb|AL672056.4| Mouse DNA sequence from clone RP23-467O2 on chromosome X, complete
              sequence
          Length = 150695

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 555    tagctgagagcttcttcctgatctgcaaa 583
              |||||||||||| | ||||||||||||||
Sbjct: 132249 tagctgagagctacatcctgatctgcaaa 132221
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>ref|NM_179119.2| Arabidopsis thaliana WRKY20; transcription factor AT4G26640
           (WRKY20) transcript variant AT4G26640.2 mRNA, complete
           cds
          Length = 2006

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 ccatagctgagagcttcttc 571
           ||||||||||||||||||||
Sbjct: 28  ccatagctgagagcttcttc 47
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>gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, complete sequence
          Length = 196756

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 558   ctgagagcttcttcctgatctgca 581
             ||||||||| ||||||||||||||
Sbjct: 23407 ctgagagctacttcctgatctgca 23430
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>gb|U89593.1|RNU89593 Rattus norvegicus microsatellite sequence D0Mco65
          Length = 286

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 accagcgacagaaaaatacacaca 197
           |||||||| |||||||||||||||
Sbjct: 87  accagcgatagaaaaatacacaca 110
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>gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosome 19, complete sequence
          Length = 245582

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 555    tagctgagagcttcttcctgatctgcaa 582
              |||||||||||| | |||||||||||||
Sbjct: 147154 tagctgagagctacatcctgatctgcaa 147181
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>gb|AC158940.8| Mus musculus chromosome 1, clone RP24-284D7, complete sequence
          Length = 163660

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    acagaaaaatacacacaata 200
              ||||||||||||||||||||
Sbjct: 112088 acagaaaaatacacacaata 112069
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
             genome
          Length = 686194

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 612   agctatattttcttaatgatctga 635
             |||||||||||||| |||||||||
Sbjct: 80211 agctatattttctttatgatctga 80234
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>emb|AJ965606.1| Pisum sativum PDR1 retrotransposon partial left terminal repeat,
           clone LTR_tt_80-
          Length = 484

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 aagtttttccatcatcaaaa 242
           ||||||||||||||||||||
Sbjct: 339 aagtttttccatcatcaaaa 358
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>emb|CR450685.13| Zebrafish DNA sequence from clone DKEY-83K24 in linkage group 8, complete
              sequence
          Length = 195473

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 616    atattttcttaatgatctgaacaa 639
              ||||||||| ||||||||||||||
Sbjct: 109570 atattttctaaatgatctgaacaa 109593
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>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence
          Length = 165307

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 555    tagctgagagcttcttcctgatctgcaa 582
              |||||||||||| |||| ||||||||||
Sbjct: 154121 tagctgagagctacttcttgatctgcaa 154094
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>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 555    tagctgagagcttcttcctgatctgcaa 582
              |||||||||||| | |||||||||||||
Sbjct: 174081 tagctgagagctgcatcctgatctgcaa 174108
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>emb|CR376783.22| Zebrafish DNA sequence from clone DKEY-41N20 in linkage group 13,
              complete sequence
          Length = 205064

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 310    ttgcaatgtcataagaaccatctt 333
              |||||||||||||||||| |||||
Sbjct: 154345 ttgcaatgtcataagaacaatctt 154322
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>gb|AC136139.24| Medicago truncatula clone mth2-22c2, complete sequence
          Length = 66079

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   atctgcaaaacaaaatcatt 594
             ||||||||||||||||||||
Sbjct: 29795 atctgcaaaacaaaatcatt 29776
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>emb|AL049635.8|HSJ1083G3 Human DNA sequence from clone RP5-1083G3 on chromosome 11p13 Contains
             GSSs and a putative CpG island, complete sequence
          Length = 98413

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 551   tccatagctgagagcttcttcctg 574
             |||| |||||||||||||||||||
Sbjct: 76272 tccagagctgagagcttcttcctg 76295
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>gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 177865

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 650  ctcaagctcatgttccttcc 669
            ||||||||||||||||||||
Sbjct: 8775 ctcaagctcatgttccttcc 8794
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>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 552    ccatagctgagagcttcttc 571
              ||||||||||||||||||||
Sbjct: 137946 ccatagctgagagcttcttc 137927
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>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project)
          Length = 92657

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   ccatagctgagagcttcttc 571
             ||||||||||||||||||||
Sbjct: 69814 ccatagctgagagcttcttc 69795
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>emb|AJ237705.1|AGA237705 Anopheles gambiae apy gene for putative apyrase protein
          Length = 3543

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  aaaaactgtccacattctgt 447
            ||||||||||||||||||||
Sbjct: 3242 aaaaactgtccacattctgt 3223
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>emb|AJ237704.1|AGA237704 Anopheles gambiae mRNA for putative apyrase protein
          Length = 2272

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  aaaaactgtccacattctgt 447
            ||||||||||||||||||||
Sbjct: 2113 aaaaactgtccacattctgt 2094
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>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 164941

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   atattttcttaatgatctga 635
             ||||||||||||||||||||
Sbjct: 39892 atattttcttaatgatctga 39911
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>gb|AC092709.2| Homo sapiens chromosome 8, clone RP11-509P12, complete sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 620    tttcttaatgatctgaacaa 639
              ||||||||||||||||||||
Sbjct: 158811 tttcttaatgatctgaacaa 158830
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>gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, complete sequence
          Length = 185315

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 620   tttcttaatgatctgaacaa 639
             ||||||||||||||||||||
Sbjct: 65839 tttcttaatgatctgaacaa 65858
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>gb|AC117588.11| Mus musculus chromosome 15, clone RP23-177B8, complete sequence
          Length = 211177

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 555    tagctgagagcttcttcctgatctgcaaaaca 586
              |||||||||||| | ||||||||| |||||||
Sbjct: 156104 tagctgagagctacatcctgatctacaaaaca 156135
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>emb|BX826663.1|CNS0A43T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZA12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1975

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 ccatagctgagagcttcttc 571
           ||||||||||||||||||||
Sbjct: 20  ccatagctgagagcttcttc 39
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>emb|BX827276.1|CNS0A2HA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS31ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2006

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 ccatagctgagagcttcttc 571
           ||||||||||||||||||||
Sbjct: 27  ccatagctgagagcttcttc 46
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>gb|AC107739.9| Mus musculus chromosome 7, clone RP23-345M1, complete sequence
          Length = 205227

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 558    ctgagagcttcttcctgatctgca 581
              ||||||||| ||||||||||||||
Sbjct: 132966 ctgagagctacttcctgatctgca 132989
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>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete
             sequence
          Length = 189900

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   agcagtcccatcattaagga 275
             ||||||||||||||||||||
Sbjct: 72645 agcagtcccatcattaagga 72664
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>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8
             Contains part of a novel gene for a protein similar to
             human FLJ12550, the pim1 gene for pim-1 oncogene (proviral
             integration site 1), part of a novel gene for a protein
             similar to vertebrate UDP-galactose transporters, a novel
             gene for a protein similar to vertebrate caldesmon 1
             (CALD1) and a CpG island, complete sequence
          Length = 140984

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 616   atattttcttaatgatctgaacaa 639
             ||||||||| ||||||||||||||
Sbjct: 56426 atattttctaaatgatctgaacaa 56449
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>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete
              sequence
          Length = 295143

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 616    atattttcttaatgatctga 635
              ||||||||||||||||||||
Sbjct: 271969 atattttcttaatgatctga 271988
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>gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, complete sequence
          Length = 177964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 555    tagctgagagcttcttcctgatctgcaa 582
              |||||||||||| | |||||||||||||
Sbjct: 130209 tagctgagagctgcatcctgatctgcaa 130182
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>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123,
             complete sequence
          Length = 79601

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 615   tatattttcttaatgatctgaaca 638
             ||||||||||| ||||||||||||
Sbjct: 34900 tatattttcttgatgatctgaaca 34923
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>emb|AL713894.12| Mouse DNA sequence from clone RP23-48J18 on chromosome X, complete
             sequence
          Length = 264395

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   agatacataatacacaggga 132
             ||||||||||||||||||||
Sbjct: 47023 agatacataatacacaggga 47042
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>emb|AL671520.6| Mouse DNA sequence from clone RP23-99G21 on chromosome 4, complete
             sequence
          Length = 213303

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 503   ctagtgaaagaaacacacgagttc 526
             ||||||||||||||| ||||||||
Sbjct: 48033 ctagtgaaagaaacagacgagttc 48010
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>emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chromosome 2, complete
             sequence
          Length = 181349

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 555   tagctgagagcttcttcctgatctgcaa 582
             |||||||||||| |||| ||||||||||
Sbjct: 55961 tagctgagagctacttcttgatctgcaa 55988
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>emb|AL669891.12| Mouse DNA sequence from clone RP23-271F3 on chromosome X, complete
             sequence
          Length = 221898

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 606   gtgtatagctatattttcttaatg 629
             |||||||| |||||||||||||||
Sbjct: 54997 gtgtatagatatattttcttaatg 54974
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>emb|AL513352.12| Mouse DNA sequence from clone RP23-180L12 on chromosome 15, complete
             sequence
          Length = 240977

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 555   tagctgagagcttcttcctgatctgcaa 582
             |||||||||||| | |||||||||||||
Sbjct: 46226 tagctgagagctacatcctgatctgcaa 46199
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>gb|AC159709.8| Mus musculus 10 BAC RP23-136O17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202716

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 649    cctcaagctcatgttccttc 668
              ||||||||||||||||||||
Sbjct: 140726 cctcaagctcatgttccttc 140745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,247,972
Number of Sequences: 3902068
Number of extensions: 6247972
Number of successful extensions: 117117
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116911
Number of HSP's gapped (non-prelim): 205
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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