ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah63d22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2031 Score = 101 bits (51), Expect = 3e-18 Identities = 132/159 (83%) Strand = Plus / Minus Query: 457 aagtgaccccttgtgccagttctgaagcacccagtcgaccaggacgagctggttgccttg 516 |||||| || ||||||||||||||||||||||| || |||| || || || ||||||| Sbjct: 1725 aagtgatcctttgtgccagttctgaagcacccaatcaaccaagataagttgtctgccttg 1666 Query: 517 cgggtcctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggc 576 | ||| |||||||||||| |||||||||| ||||||||||||| || |||||||| | Sbjct: 1665 tgagtcttccttgataggcttttgcccacaagtaacctcaagaataaatatgccaaatga 1606 Query: 577 aaatacatcggtgagagtggttgctttacctcggtgtac 615 || ||||| || ||||||||||| || |||| |||||| Sbjct: 1605 gaagacatcagtaagagtggttgcctttcctctgtgtac 1567
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 3e-18 Identities = 132/159 (83%) Strand = Plus / Plus Query: 457 aagtgaccccttgtgccagttctgaagcacccagtcgaccaggacgagctggttgccttg 516 |||||| || ||||||||||||||||||||||| || |||| || || || ||||||| Sbjct: 1663681 aagtgatcctttgtgccagttctgaagcacccaatcaaccaagataagttgtctgccttg 1663740 Query: 517 cgggtcctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggc 576 | ||| |||||||||||| |||||||||| ||||||||||||| || |||||||| | Sbjct: 1663741 tgagtcttccttgataggcttttgcccacaagtaacctcaagaataaatatgccaaatga 1663800 Query: 577 aaatacatcggtgagagtggttgctttacctcggtgtac 615 || ||||| || ||||||||||| || |||| |||||| Sbjct: 1663801 gaagacatcagtaagagtggttgcctttcctctgtgtac 1663839 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 532 aggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 |||| ||||||||||||| |||||||||| ||| |||||||||||||||||||| || || Sbjct: 1642925 aggcttttgcccacaggtgacctcaagaatgaacatgccaaaggcaaatacatctgtaag 1642984 Query: 592 agtggttgcttt 603 || ||| ||||| Sbjct: 1642985 aggggtcgcttt 1642996 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 ||||||||||| ||||| ||||||| |||||| |||||||||||||| | ||||| ||| Sbjct: 1777606 ccgtcgaggtattgcatggcttgcctcatgctaggccttgcttgagggaccgggtgtgag 1777547 Query: 377 cacaagagccctagcttgagcgcaaggcatgcctc 411 || | ||||||||||| ||| | | ||||||||| Sbjct: 1777546 catagcagccctagcttcagcaccaagcatgcctc 1777512 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 540 gcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggt 588 |||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 1655315 gcccacaggtgacttcaagaacaaacatgccaaaggcaaatacatcggt 1655363 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 298 ctccgggagcggcacgtcgccgtcgaggtactgcat 333 |||||| ||||||||||||||||||||||||||||| Sbjct: 1787943 ctccggcagcggcacgtcgccgtcgaggtactgcat 1787908 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 ||||| |||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 1703954 ccacaagtaacctcaagaacaaatatgccaaaggcgaagacatcggtgag 1704003 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 530 ataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 ||||| |||||||||||||| |||||||||| || |||||||| ||||| ||||| Sbjct: 10837901 ataggtctttgcccacaggtgacctcaagaagaaatatgccaaatgcaaagacatc 10837956 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 539 tgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 |||||||||| |||||| ||||| || |||||||| ||||||||||| Sbjct: 10843676 tgcccacaggcaacctcgagaacaaacatgccaaaagcaaatacatc 10843722 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||| || |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 1725422 ccacatgtcacctcaagaaggaacatgccaaatgcaaacacatcggtgaga 1725472 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 533 ggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||||||||| ||||| |||||||||| ||| ||||||||||| ||||| |||||| Sbjct: 1651035 ggcctttgcccgcaggtgacctcaagaaggaatgcaccaaaggcaaacacatctgtgaga 1651094 Query: 593 gtggttgctttacct 607 | || ||| |||||| Sbjct: 1651095 ggggatgccttacct 1651109 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 528 tgataggcctttgcccacaggtaacctcaagaacgaagatgccaaa 573 |||||||| ||||||| || | ||||||||||| |||||||||||| Sbjct: 1698495 tgataggcttttgcccgcaagaaacctcaagaaggaagatgccaaa 1698540 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 365 aatgggtgcgagcacaagagccctagcttgagcgcaaggcatgcctca 412 ||||| || |||||||||||||| || || ||| |||||||||||||| Sbjct: 1639161 aatggttgtgagcacaagagcccaagtttcagcacaaggcatgcctca 1639208 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggc 576 ||||| |||||||||||||| || ||||||||||| Sbjct: 1672478 ccacaagtaacctcaagaacaaatatgccaaaggc 1672512 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 526 cttgataggcctttgcccacaggtaacctcaagaa 560 ||||| |||||||||||||||||| | |||||||| Sbjct: 1639322 cttgacaggcctttgcccacaggtgatctcaagaa 1639356 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 524 tccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaataca 583 ||||| ||||||||||||||||| | ||||| |||| ||| ||||||| ||||| ||| Sbjct: 1632382 tccttaataggcctttgcccacatatgacctcgagaaggaatgtgccaaatgcaaaaaca 1632441 Query: 584 tcggtgagagt 594 || || ||||| Sbjct: 1632442 tctgtaagagt 1632452 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Plus Query: 523 ctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatac 582 |||||||||||| | ||||||||||| ||||| || | ||| | ||| || || || || Sbjct: 1623733 ctccttgataggtttctgcccacaggtgacctcgaggaggaacacgccgaacgcgaacac 1623792 Query: 583 atcggtgagagtggttgcttt 603 ||||||||||| || |||||| Sbjct: 1623793 atcggtgagaggggatgcttt 1623813 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 368 gggtgcgagcacaagagccctagcttgagcgcaaggcatgcctc 411 ||||| |||||||||||||| | ||||||| | ||||| ||||| Sbjct: 1627880 gggtgtgagcacaagagccccaacttgagcaccaggcaagcctc 1627923
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 101 bits (51), Expect = 3e-18 Identities = 132/159 (83%) Strand = Plus / Plus Query: 457 aagtgaccccttgtgccagttctgaagcacccagtcgaccaggacgagctggttgccttg 516 |||||| || ||||||||||||||||||||||| || |||| || || || ||||||| Sbjct: 5881 aagtgatcctttgtgccagttctgaagcacccaatcaaccaagataagttgtctgccttg 5940 Query: 517 cgggtcctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggc 576 | ||| |||||||||||| |||||||||| ||||||||||||| || |||||||| | Sbjct: 5941 tgagtcttccttgataggcttttgcccacaagtaacctcaagaataaatatgccaaatga 6000 Query: 577 aaatacatcggtgagagtggttgctttacctcggtgtac 615 || ||||| || ||||||||||| || |||| |||||| Sbjct: 6001 gaagacatcagtaagagtggttgcctttcctctgtgtac 6039 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 ||||| |||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 46154 ccacaagtaacctcaagaacaaatatgccaaaggcgaagacatcggtgag 46203 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||| || |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 67622 ccacatgtcacctcaagaaggaacatgccaaatgcaaacacatcggtgaga 67672 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 528 tgataggcctttgcccacaggtaacctcaagaacgaagatgccaaa 573 |||||||| ||||||| || | ||||||||||| |||||||||||| Sbjct: 40695 tgataggcttttgcccgcaagaaacctcaagaaggaagatgccaaa 40740 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggc 576 ||||| |||||||||||||| || ||||||||||| Sbjct: 14678 ccacaagtaacctcaagaacaaatatgccaaaggc 14712
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 101 bits (51), Expect = 3e-18 Identities = 132/159 (83%) Strand = Plus / Plus Query: 457 aagtgaccccttgtgccagttctgaagcacccagtcgaccaggacgagctggttgccttg 516 |||||| || ||||||||||||||||||||||| || |||| || || || ||||||| Sbjct: 132336 aagtgatcctttgtgccagttctgaagcacccaatcaaccaagataagttgtctgccttg 132395 Query: 517 cgggtcctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggc 576 | ||| |||||||||||| |||||||||| ||||||||||||| || |||||||| | Sbjct: 132396 tgagtcttccttgataggcttttgcccacaagtaacctcaagaataaatatgccaaatga 132455 Query: 577 aaatacatcggtgagagtggttgctttacctcggtgtac 615 || ||||| || ||||||||||| || |||| |||||| Sbjct: 132456 gaagacatcagtaagagtggttgcctttcctctgtgtac 132494 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 532 aggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 |||| ||||||||||||| |||||||||| ||| |||||||||||||||||||| || || Sbjct: 111580 aggcttttgcccacaggtgacctcaagaatgaacatgccaaaggcaaatacatctgtaag 111639 Query: 592 agtggttgcttt 603 || ||| ||||| Sbjct: 111640 aggggtcgcttt 111651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 540 gcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggt 588 |||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 123970 gcccacaggtgacttcaagaacaaacatgccaaaggcaaatacatcggt 124018 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 ||||| |||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 172609 ccacaagtaacctcaagaacaaatatgccaaaggcgaagacatcggtgag 172658 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 533 ggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||||||||| ||||| |||||||||| ||| ||||||||||| ||||| |||||| Sbjct: 119690 ggcctttgcccgcaggtgacctcaagaaggaatgcaccaaaggcaaacacatctgtgaga 119749 Query: 593 gtggttgctttacct 607 | || ||| |||||| Sbjct: 119750 ggggatgccttacct 119764 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 528 tgataggcctttgcccacaggtaacctcaagaacgaagatgccaaa 573 |||||||| ||||||| || | ||||||||||| |||||||||||| Sbjct: 167150 tgataggcttttgcccgcaagaaacctcaagaaggaagatgccaaa 167195 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 365 aatgggtgcgagcacaagagccctagcttgagcgcaaggcatgcctca 412 ||||| || |||||||||||||| || || ||| |||||||||||||| Sbjct: 107816 aatggttgtgagcacaagagcccaagtttcagcacaaggcatgcctca 107863 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggc 576 ||||| |||||||||||||| || ||||||||||| Sbjct: 141133 ccacaagtaacctcaagaacaaatatgccaaaggc 141167 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 526 cttgataggcctttgcccacaggtaacctcaagaa 560 ||||| |||||||||||||||||| | |||||||| Sbjct: 107977 cttgacaggcctttgcccacaggtgatctcaagaa 108011 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 524 tccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaataca 583 ||||| ||||||||||||||||| | ||||| |||| ||| ||||||| ||||| ||| Sbjct: 101037 tccttaataggcctttgcccacatatgacctcgagaaggaatgtgccaaatgcaaaaaca 101096 Query: 584 tcggtgagagt 594 || || ||||| Sbjct: 101097 tctgtaagagt 101107 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Plus Query: 523 ctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatac 582 |||||||||||| | ||||||||||| ||||| || | ||| | ||| || || || || Sbjct: 92388 ctccttgataggtttctgcccacaggtgacctcgaggaggaacacgccgaacgcgaacac 92447 Query: 583 atcggtgagagtggttgcttt 603 ||||||||||| || |||||| Sbjct: 92448 atcggtgagaggggatgcttt 92468 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 368 gggtgcgagcacaagagccctagcttgagcgcaaggcatgcctc 411 ||||| |||||||||||||| | ||||||| | ||||| ||||| Sbjct: 96535 gggtgtgagcacaagagccccaacttgagcaccaggcaagcctc 96578
>ref|XM_476517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 532 aggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 |||| ||||||||||||| |||||||||| ||| |||||||||||||||||||| || || Sbjct: 1569 aggcttttgcccacaggtgacctcaagaatgaacatgccaaaggcaaatacatctgtaag 1510 Query: 592 agtggttgcttt 603 || ||| ||||| Sbjct: 1509 aggggtcgcttt 1498
>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E09 Length = 69300 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 532 aggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 |||| ||||||||||||| |||||||||| ||| |||||||||||||||||||| || || Sbjct: 52078 aggcttttgcccacaggtgacctcaagaatgaacatgccaaaggcaaatacatctgtaag 52137 Query: 592 agtggttgcttt 603 || ||| ||||| Sbjct: 52138 aggggtcgcttt 52149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 540 gcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggt 588 |||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 64468 gcccacaggtgacttcaagaacaaacatgccaaaggcaaatacatcggt 64516 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 533 ggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||||||||| ||||| |||||||||| ||| ||||||||||| ||||| |||||| Sbjct: 60188 ggcctttgcccgcaggtgacctcaagaaggaatgcaccaaaggcaaacacatctgtgaga 60247 Query: 593 gtggttgctttacct 607 | || ||| |||||| Sbjct: 60248 ggggatgccttacct 60262 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 365 aatgggtgcgagcacaagagccctagcttgagcgcaaggcatgcctca 412 ||||| || |||||||||||||| || || ||| |||||||||||||| Sbjct: 48314 aatggttgtgagcacaagagcccaagtttcagcacaaggcatgcctca 48361 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 526 cttgataggcctttgcccacaggtaacctcaagaa 560 ||||| |||||||||||||||||| | |||||||| Sbjct: 48475 cttgacaggcctttgcccacaggtgatctcaagaa 48509 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 524 tccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaataca 583 ||||| ||||||||||||||||| | ||||| |||| ||| ||||||| ||||| ||| Sbjct: 41535 tccttaataggcctttgcccacatatgacctcgagaaggaatgtgccaaatgcaaaaaca 41594 Query: 584 tcggtgagagt 594 || || ||||| Sbjct: 41595 tctgtaagagt 41605 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Plus Query: 523 ctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatac 582 |||||||||||| | ||||||||||| ||||| || | ||| | ||| || || || || Sbjct: 32886 ctccttgataggtttctgcccacaggtgacctcgaggaggaacacgccgaacgcgaacac 32945 Query: 583 atcggtgagagtggttgcttt 603 ||||||||||| || |||||| Sbjct: 32946 atcggtgagaggggatgcttt 32966 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 368 gggtgcgagcacaagagccctagcttgagcgcaaggcatgcctc 411 ||||| |||||||||||||| | ||||||| | ||||| ||||| Sbjct: 37033 gggtgtgagcacaagagccccaacttgagcaccaggcaagcctc 37076
>ref|XM_476526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2019 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 ||||||||||| ||||| ||||||| |||||| |||||||||||||| | ||||| ||| Sbjct: 1862 ccgtcgaggtattgcatggcttgcctcatgctaggccttgcttgagggaccgggtgtgag 1803 Query: 377 cacaagagccctagcttgagcgcaaggcatgcctc 411 || | ||||||||||| ||| | | ||||||||| Sbjct: 1802 catagcagccctagcttcagcaccaagcatgcctc 1768
>ref|XM_476527.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2263 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 ||||||||||| ||||| ||||||| |||||| |||||||||||||| | ||||| ||| Sbjct: 1981 ccgtcgaggtattgcatggcttgcctcatgctaggccttgcttgagggaccgggtgtgag 1922 Query: 377 cacaagagccctagcttgagcgcaaggcatgcctc 411 || | ||||||||||| ||| | | ||||||||| Sbjct: 1921 catagcagccctagcttcagcaccaagcatgcctc 1887
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 ||||||||||| ||||| ||||||| |||||| |||||||||||||| | ||||| ||| Sbjct: 29825 ccgtcgaggtattgcatggcttgcctcatgctaggccttgcttgagggaccgggtgtgag 29766 Query: 377 cacaagagccctagcttgagcgcaaggcatgcctc 411 || | ||||||||||| ||| | | ||||||||| Sbjct: 29765 catagcagccctagcttcagcaccaagcatgcctc 29731 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 298 ctccgggagcggcacgtcgccgtcgaggtactgcat 333 |||||| ||||||||||||||||||||||||||||| Sbjct: 40162 ctccggcagcggcacgtcgccgtcgaggtactgcat 40127
>dbj|AK108625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E02, full insert sequence Length = 2259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 ||||||||||| ||||| ||||||| |||||| |||||||||||||| | ||||| ||| Sbjct: 1977 ccgtcgaggtattgcatggcttgcctcatgctaggccttgcttgagggaccgggtgtgag 1918 Query: 377 cacaagagccctagcttgagcgcaaggcatgcctc 411 || | ||||||||||| ||| | | ||||||||| Sbjct: 1917 catagcagccctagcttcagcaccaagcatgcctc 1883
>ref|XM_476520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2034 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 540 gcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggt 588 |||||||||| || |||||||| || ||||||||||||||||||||||| Sbjct: 1636 gcccacaggtgacttcaagaacaaacatgccaaaggcaaatacatcggt 1588
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 524 tccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaataca 583 |||||||| ||||||| |||||| || || |||||||| || || || |||| ||||||| Sbjct: 5072760 tccttgatgggccttttcccacatgtgacttcaagaacaaatataccgaaggaaaataca 5072701 Query: 584 tcggtgagagtggttgc 600 |||||||||| |||||| Sbjct: 5072700 tcggtgagaggggttgc 5072684
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 524 tccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaataca 583 |||||||| ||||||| |||||| || || |||||||| || || || |||| ||||||| Sbjct: 74877 tccttgatgggccttttcccacatgtgacttcaagaacaaatataccgaaggaaaataca 74818 Query: 584 tcggtgagagtggttgc 600 |||||||||| |||||| Sbjct: 74817 tcggtgagaggggttgc 74801
>ref|XM_476529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2040 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 298 ctccgggagcggcacgtcgccgtcgaggtactgcat 333 |||||| ||||||||||||||||||||||||||||| Sbjct: 1935 ctccggcagcggcacgtcgccgtcgaggtactgcat 1900
>ref|NM_186228.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgag 591 ||||| |||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 1670 ccacaagtaacctcaagaacaaatatgccaaaggcgaagacatcggtgag 1621
>ref|XM_465097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 302 gggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggccttgcttga 361 ||||| |||| ||| |||| ||||||||||| | |||| |||||| | |||||| | | | Sbjct: 1934 gggaggggcatgtctccgttgaggtactgcacaacttgtcgcatggttggccttacatta 1875 Query: 362 ggaaatgggtgcgagcacaagagcccta 389 | | ||||||||||||||||||||||| Sbjct: 1874 gacattgggtgcgagcacaagagcccta 1847
>ref|XM_477490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 530 ataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 ||||| |||||||||||||| |||||||||| || |||||||| ||||| ||||| Sbjct: 1649 ataggtctttgcccacaggtgacctcaagaagaaatatgccaaatgcaaagacatc 1594
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 302 gggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggccttgcttga 361 ||||| |||| ||| |||| ||||||||||| | |||| |||||| | |||||| | | | Sbjct: 11472192 gggaggggcatgtctccgttgaggtactgcacaacttgtcgcatggttggccttacatta 11472133 Query: 362 ggaaatgggtgcgagcacaagagcccta 389 | | ||||||||||||||||||||||| Sbjct: 11472132 gacattgggtgcgagcacaagagcccta 11472105 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 320 tcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgagcac 379 |||||||||||||| |||| |||||||| |||||| | || ||||| ||||||||| Sbjct: 11412023 tcgaggtactgcatgacttgtcgcatgctcggccttaaatcgggcaatggatgcgagcac 11411964 Query: 380 aagagccctagctt 393 || ||||||||||| Sbjct: 11411963 aaaagccctagctt 11411950 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 |||| ||||||||||| | |||| |||||| | |||||| | | || | |||||||||| Sbjct: 11428685 ccgttgaggtactgcacaacttgtcgcatggttggccttacattagacattgggtgcgag 11428626 Query: 377 cacaagagcccta 389 ||||||||||||| Sbjct: 11428625 cacaagagcccta 11428613 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 aattaagaatatatatgcatg 86 ||||||||||||||||||||| Sbjct: 35947858 aattaagaatatatatgcatg 35947878
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 302 gggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggccttgcttga 361 ||||| |||| ||| |||| ||||||||||| | |||| |||||| | |||||| | | | Sbjct: 54684 gggaggggcatgtctccgttgaggtactgcacaacttgtcgcatggttggccttacatta 54625 Query: 362 ggaaatgggtgcgagcacaagagcccta 389 | | ||||||||||||||||||||||| Sbjct: 54624 gacattgggtgcgagcacaagagcccta 54597 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 |||| ||||||||||| | |||| |||||| | |||||| | | || | |||||||||| Sbjct: 11177 ccgttgaggtactgcacaacttgtcgcatggttggccttacattagacattgggtgcgag 11118 Query: 377 cacaagagcccta 389 ||||||||||||| Sbjct: 11117 cacaagagcccta 11105
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 530 ataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 ||||| |||||||||||||| |||||||||| || |||||||| ||||| ||||| Sbjct: 48660 ataggtctttgcccacaggtgacctcaagaagaaatatgccaaatgcaaagacatc 48715 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 539 tgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 |||||||||| |||||| ||||| || |||||||| ||||||||||| Sbjct: 54435 tgcccacaggcaacctcgagaacaaacatgccaaaagcaaatacatc 54481
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 530 ataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 ||||| |||||||||||||| |||||||||| || |||||||| ||||| ||||| Sbjct: 14276 ataggtctttgcccacaggtgacctcaagaagaaatatgccaaatgcaaagacatc 14331 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 539 tgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 |||||||||| |||||| ||||| || |||||||| ||||||||||| Sbjct: 20051 tgcccacaggcaacctcgagaacaaacatgccaaaagcaaatacatc 20097
>ref|NM_196701.1| Oryza sativa (japonica cultivar-group) putative serine/threonine-specific kinase like protein (OSJNBa0046P18.10), mRNA Length = 2844 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggcct 354 |||||||| |||||| || |||||||||||||||||| | ||||||||||| ||||| Sbjct: 1931 agctccggcagcggcgcgctgccgtcgaggtactgcatcacctgccgcatgctcggcct 1873
>ref|XM_477491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 539 tgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatc 585 |||||||||| |||||| ||||| || |||||||| ||||||||||| Sbjct: 1640 tgcccacaggcaacctcgagaacaaacatgccaaaagcaaatacatc 1594
>ref|NM_186233.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||| || |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 1649 ccacatgtcacctcaagaaggaacatgccaaatgcaaacacatcggtgaga 1599
>ref|XM_476519.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2079 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 533 ggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatacatcggtgaga 592 ||||||||||| ||||| |||||||||| ||| ||||||||||| ||||| |||||| Sbjct: 1709 ggcctttgcccgcaggtgacctcaagaaggaatgcaccaaaggcaaacacatctgtgaga 1650 Query: 593 gtggttgctttacct 607 | || ||| |||||| Sbjct: 1649 ggggatgccttacct 1635
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggcct 354 |||||||| |||||| || |||||||||||||||||| | ||||||||||| ||||| Sbjct: 15365560 agctccggcagcggcgcgctgccgtcgaggtactgcatcacctgccgcatgctcggcct 15365502 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 gctccgggagcggcacgtcgccgtcgagg 325 ||||||| |||||| |||||||||||||| Sbjct: 15362115 gctccggcagcggcgcgtcgccgtcgagg 15362087
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggcct 354 |||||||| |||||| || |||||||||||||||||| | ||||||||||| ||||| Sbjct: 82923 agctccggcagcggcgcgctgccgtcgaggtactgcatcacctgccgcatgctcggcct 82865 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 gctccgggagcggcacgtcgccgtcgagg 325 ||||||| |||||| |||||||||||||| Sbjct: 79478 gctccggcagcggcgcgtcgccgtcgagg 79450
>dbj|AK071359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J23, full insert sequence Length = 2374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggcct 354 |||||||| |||||| || |||||||||||||||||| | ||||||||||| ||||| Sbjct: 2052 agctccggcagcggcgcgctgccgtcgaggtactgcatcacctgccgcatgctcggcct 1994
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgcatagcttgccgcatgctgggcct 354 |||||||| |||||| || |||||||||||||||||| | ||||||||||| ||||| Sbjct: 15373801 agctccggcagcggcgcgctgccgtcgaggtactgcatcacctgccgcatgctcggcct 15373743 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 gctccgggagcggcacgtcgccgtcgagg 325 ||||||| |||||| |||||||||||||| Sbjct: 15370356 gctccggcagcggcgcgtcgccgtcgagg 15370328
>ref|XM_465090.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 320 tcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgagcac 379 |||||||||||||| |||| |||||||| |||||| | || ||||| ||||||||| Sbjct: 1895 tcgaggtactgcatgacttgtcgcatgctcggccttaaatcgggcaatggatgcgagcac 1836 Query: 380 aagagccctagctt 393 || ||||||||||| Sbjct: 1835 aaaagccctagctt 1822
>ref|NM_186226.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1911 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 528 tgataggcctttgcccacaggtaacctcaagaacgaagatgccaaa 573 |||||||| ||||||| || | ||||||||||| |||||||||||| Sbjct: 1660 tgataggcttttgcccgcaagaaacctcaagaaggaagatgccaaa 1615
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1654_A02 Length = 128520 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 320 tcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgagcac 379 |||||||||||||| |||| |||||||| |||||| | || ||||| ||||||||| Sbjct: 81495 tcgaggtactgcatgacttgtcgcatgctcggccttaaatcgggcaatggatgcgagcac 81436 Query: 380 aagagccctagctt 393 || ||||||||||| Sbjct: 81435 aaaagccctagctt 81422 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 |||| ||||||||||| | |||| |||||| | |||||| | | || | |||||||||| Sbjct: 98157 ccgttgaggtactgcacaacttgtcgcatggttggccttacattagacattgggtgcgag 98098 Query: 377 cacaagagcccta 389 ||||||||||||| Sbjct: 98097 cacaagagcccta 98085
>ref|XM_465094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2213 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 |||| ||||||||||| | |||| |||||| | |||||| | | || | |||||||||| Sbjct: 1905 ccgttgaggtactgcacaacttgtcgcatggttggccttacattagacattgggtgcgag 1846 Query: 377 cacaagagcccta 389 ||||||||||||| Sbjct: 1845 cacaagagcccta 1833
>ref|XM_473280.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2022 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgca 332 |||||||| |||||||||||||| || |||||||||| Sbjct: 1892 agctccggcagcggcacgtcgccttccaggtactgca 1856
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgca 332 |||||||| |||||||||||||| || |||||||||| Sbjct: 83379 agctccggcagcggcacgtcgccttccaggtactgca 83415 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gggtgcgagcacaagagccctagcttgagcgc 399 ||||||| ||||| |||||| ||||||||||| Sbjct: 88603 gggtgcgcgcacatgagccccagcttgagcgc 88572
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgca 332 |||||||| |||||||||||||| || |||||||||| Sbjct: 26546493 agctccggcagcggcacgtcgccttccaggtactgca 26546529 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gggtgcgagcacaagagccctagcttgagcgc 399 ||||||| ||||| |||||| ||||||||||| Sbjct: 26551717 gggtgcgcgcacatgagccccagcttgagcgc 26551686
>dbj|AK108666.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G04, full insert sequence Length = 2213 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 |||| ||||||||||| | |||| |||||| | |||||| | | || | |||||||||| Sbjct: 1905 ccgttgaggtactgcacaacttgtcgcatggttggccttacattagacattgggtgcgag 1846 Query: 377 cacaagagcccta 389 ||||||||||||| Sbjct: 1845 cacaagagcccta 1833
>dbj|AK105289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-F02, full insert sequence Length = 2156 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccgtcgaggtactgca 332 |||||||| |||||||||||||| || |||||||||| Sbjct: 1852 agctccggcagcggcacgtcgccttccaggtactgca 1816
>dbj|AK099932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118N10, full insert sequence Length = 3631 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 317 ccgtcgaggtactgcatagcttgccgcatgctgggccttgcttgaggaaatgggtgcgag 376 |||| ||||||||||| | |||| |||||| | |||||| | | || | |||||||||| Sbjct: 1586 ccgttgaggtactgcacaacttgtcgcatggttggccttacattagacattgggtgcgag 1645 Query: 377 cacaagagcccta 389 ||||||||||||| Sbjct: 1646 cacaagagcccta 1658
>ref|XM_476516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2001 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 365 aatgggtgcgagcacaagagccctagcttgagcgcaaggcatgcctca 412 ||||| || |||||||||||||| || || ||| |||||||||||||| Sbjct: 1805 aatggttgtgagcacaagagcccaagtttcagcacaaggcatgcctca 1758 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 526 cttgataggcctttgcccacaggtaacctcaagaa 560 ||||| |||||||||||||||||| | |||||||| Sbjct: 1644 cttgacaggcctttgcccacaggtgatctcaagaa 1610
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 64 ttaattaagaatatatatgcatgt 87 |||||||||||||||||||||||| Sbjct: 76530 ttaattaagaatatatatgcatgt 76507
>dbj|AK066085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050A21, full insert sequence Length = 2360 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 365 aatgggtgcgagcacaagagccctagcttgagcgcaaggcatgcctca 412 ||||| || |||||||||||||| || || ||| |||||||||||||| Sbjct: 374 aatggttgtgagcacaagagcccaagtttcagcacaaggcatgcctca 421 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 526 cttgataggcctttgcccacaggtaacctcaagaa 560 ||||| |||||||||||||||||| | |||||||| Sbjct: 535 cttgacaggcctttgcccacaggtgatctcaagaa 569
>ref|NM_186221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1866 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 542 ccacaggtaacctcaagaacgaagatgccaaaggc 576 ||||| |||||||||||||| || ||||||||||| Sbjct: 1514 ccacaagtaacctcaagaacaaatatgccaaaggc 1480
>ref|XM_476514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2016 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 524 tccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaataca 583 ||||| ||||||||||||||||| | ||||| |||| ||| ||||||| ||||| ||| Sbjct: 1655 tccttaataggcctttgcccacatatgacctcgagaaggaatgtgccaaatgcaaaaaca 1596 Query: 584 tcggtgagagt 594 || || ||||| Sbjct: 1595 tctgtaagagt 1585
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 570 caaaggcaaatacatcggtgaga 592 ||||||||||||||||||||||| Sbjct: 3380637 caaaggcaaatacatcggtgaga 3380659
>gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1986 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 cgggagaagctccgggagcggc 310 |||||||||||||||||||||| Sbjct: 77 cgggagaagctccgggagcggc 56
>gb|AF311103.5| Homo sapiens chromosome 8 clone SCb-212E3 map p21-p11, complete sequence Length = 234429 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 tcattcttcatcagggccaaca 269 |||||||||||||||||||||| Sbjct: 86053 tcattcttcatcagggccaaca 86074
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 cgggagaagctccgggagcggc 310 |||||||||||||||||||||| Sbjct: 28733371 cgggagaagctccgggagcggc 28733350
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 cgggagaagctccgggagcggc 310 |||||||||||||||||||||| Sbjct: 116445 cgggagaagctccgggagcggc 116424
>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full insert sequence Length = 3221 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 289 cgggagaagctccgggagcggc 310 |||||||||||||||||||||| Sbjct: 129 cgggagaagctccgggagcggc 108
>gb|AC131737.3| Mus musculus BAC clone RP23-106E9 from 7, complete sequence Length = 205306 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 catcagggccaacatgtggaag 277 |||||||||||||||||||||| Sbjct: 97229 catcagggccaacatgtggaag 97208
>ref|NM_196700.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0046P18.9), mRNA Length = 3579 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 gctccgggagcggcacgtcgccgtcgagg 325 ||||||| |||||| |||||||||||||| Sbjct: 3442 gctccggcagcggcgcgtcgccgtcgagg 3414
>ref|XM_476511.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2361 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Minus Query: 523 ctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatac 582 |||||||||||| | ||||||||||| ||||| || | ||| | ||| || || || || Sbjct: 1691 ctccttgataggtttctgcccacaggtgacctcgaggaggaacacgccgaacgcgaacac 1632 Query: 583 atcggtgagagtggttgcttt 603 ||||||||||| || |||||| Sbjct: 1631 atcggtgagaggggatgcttt 1611
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgttccgggagaagctccgggagcg 308 ||||||||| ||||||||||||||| Sbjct: 54148 tgttccgggcgaagctccgggagcg 54172
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 313 gtcgccgtcgaggtactgcatagcttgccgcatgctgggccttgc 357 |||||||| ||||||||||| | | || |||||||| |||||||| Sbjct: 8313708 gtcgccgttgaggtactgcacaacctgacgcatgctcggccttgc 8313752
>emb|AL133327.10| Human DNA sequence from clone RP11-77F13 on chromosome 10 Contains the 3' end of the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate synthase 2, the 3' end of a novel gene (FLJ90742) and a CpG island, complete sequence Length = 124628 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 attccattacaaaaggggaagtaca 62 ||||||||||||||| ||||||||| Sbjct: 80354 attccattacaaaagaggaagtaca 80378
>emb|AL596026.13| Zebrafish DNA sequence from clone BUSM1-234G15 in linkage group 17 Contains the sly1 gene for suppressor of ypt1, a novel gene similar to AP4 (adaptor-related protein complex 4, sigma subunit), the 3' part of the strn3 gene for striatin, calmodulin binding protein 3, a novel gene similar to COCH (coagulation factor C homolog, cochlin), a gene for a novel 7 transmembrane receptor (rhodopsin family) and a novel gene similar to KIAA1333, complete sequence Length = 127993 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ttaattaagaatatatatgcatgta 88 ||||||||||||||||||| ||||| Sbjct: 85687 ttaattaagaatatatatgtatgta 85663
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgttccgggagaagctccgggagcg 308 ||||||||| ||||||||||||||| Sbjct: 24167910 tgttccgggcgaagctccgggagcg 24167934
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 313 gtcgccgtcgaggtactgcatagcttgccgcatgctgggccttgc 357 |||||||| ||||||||||| | | || |||||||| |||||||| Sbjct: 8311543 gtcgccgttgaggtactgcacaacctgacgcatgctcggccttgc 8311587
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 313 gtcgccgtcgaggtactgcatagcttgccgcatgctgggccttgc 357 |||||||| ||||||||||| | | || |||||||| |||||||| Sbjct: 50964 gtcgccgttgaggtactgcacaacctgacgcatgctcggccttgc 51008
>dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0264G11 Length = 55919 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 aattaagaatatatatgcatg 86 ||||||||||||||||||||| Sbjct: 54027 aattaagaatatatatgcatg 54047
>dbj|AK108028.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A12, full insert sequence Length = 1522 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgttccgggagaagctccgggagcg 308 ||||||||| ||||||||||||||| Sbjct: 212 tgttccgggcgaagctccgggagcg 236
>dbj|AK105860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H11, full insert sequence Length = 2262 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 gctccgggagcggcacgtcgccgtcgagg 325 ||||||| |||||| |||||||||||||| Sbjct: 1982 gctccggcagcggcgcgtcgccgtcgagg 1954
>dbj|AK069990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039H22, full insert sequence Length = 2361 Score = 42.1 bits (21), Expect = 2.1 Identities = 66/81 (81%) Strand = Plus / Minus Query: 523 ctccttgataggcctttgcccacaggtaacctcaagaacgaagatgccaaaggcaaatac 582 |||||||||||| | ||||||||||| ||||| || | ||| | ||| || || || || Sbjct: 1691 ctccttgataggtttctgcccacaggtgacctcgaggaggaacacgccgaacgcgaacac 1632 Query: 583 atcggtgagagtggttgcttt 603 ||||||||||| || |||||| Sbjct: 1631 atcggtgagaggggatgcttt 1611
>dbj|AP008220.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa246I10 Length = 27635 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 aattaagaatatatatgcatg 86 ||||||||||||||||||||| Sbjct: 20750 aattaagaatatatatgcatg 20770
>gb|AC119863.9| Mus musculus chromosome 3, clone RP23-293A4, complete sequence Length = 179849 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 131152 caaaaggggaagtacaggtaatta 131129
>ref|XM_476512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2236 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 368 gggtgcgagcacaagagccctagcttgagcgcaaggcatgcctc 411 ||||| |||||||||||||| | ||||||| | ||||| ||||| Sbjct: 1867 gggtgtgagcacaagagccccaacttgagcaccaggcaagcctc 1824
>ref|XM_473281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gggtgcgagcacaagagccctagcttgagcgc 399 ||||||| ||||| |||||| ||||||||||| Sbjct: 1814 gggtgcgcgcacatgagccccagcttgagcgc 1783
>gb|AC147888.2| Xenopus tropicalis clone CH216-151M23, complete sequence Length = 146657 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 agttaattaagaatatatat 81 |||||||||||||||||||| Sbjct: 121275 agttaattaagaatatatat 121256
>gb|AC147222.4| Mus musculus BAC clone RP23-69L20 from chromosome 6, complete sequence Length = 182525 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 92815 caaaaggggaagtacagataatta 92838
>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence Length = 207310 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 atatatatgcatgtacaact 93 |||||||||||||||||||| Sbjct: 165376 atatatatgcatgtacaact 165357
>gb|AC157096.9| Mus musculus 6 BAC RP24-369J3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175080 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 taattaagaatatatatgcatgta 88 ||||||| |||||||||||||||| Sbjct: 60094 taattaaaaatatatatgcatgta 60117
>gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome 6, complete sequence Length = 213811 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 taaactttgctttcattctt 255 |||||||||||||||||||| Sbjct: 36973 taaactttgctttcattctt 36954
>gb|AC132362.3| Mus musculus BAC clone RP23-455B5 from chromosome 3, complete sequence Length = 164762 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 138680 caaaaggggaagtacagataatta 138703 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 131784 caaaaggggaagtacagataatta 131807
>gb|AC130840.3| Mus musculus BAC clone RP24-443G4 from chromosome 3, complete sequence Length = 175133 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 103195 caaaaggggaagtacagataatta 103172 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 96299 caaaaggggaagtacagataatta 96276
>gb|AC124426.4| Mus musculus BAC clone RP24-231B8 from chromosome 13, complete sequence Length = 199585 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 132378 caaaaggggaagtacagataatta 132355
>gb|AC115797.16| Mus musculus chromosome 17, clone RP23-405J10, complete sequence Length = 193909 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 67591 caaaaggggaagtacagataatta 67568
>gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, complete sequence Length = 202374 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 183467 caaaaggggaagtacagataatta 183444
>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence Length = 233499 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaatatatatgcatgtaca 90 |||||||||||||||||||| Sbjct: 151936 agaatatatatgcatgtaca 151917
>emb|AL645923.14| Mouse DNA sequence from clone RP23-75H1 on chromosome 13 Contains three vomeronasal 1 receptor, H (V1rh) pseudogenes, a V1ri pseudogene, a ribosomal protein L5 (RPL5) pseudogene, the V1rh9, V1rh10 and V1rh20 genes for vomeronasal 1 receptors H9, H10 and H20, the gene for a novel vomeronasal 1 receptor, H (V1rh) family member and a novel gene, complete sequence Length = 157361 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 121901 caaaaggggaagtacagataatta 121878 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 115048 caaaaggggaagtacagataatta 115025
>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the Pank3 gene for pantothenate kinase 3, a pseudogene similar to part of ribosomal protein L7a (Rpl7a), a pseudogene similar to part of fibrillarin (Fbl), the Rars gene for arginyl-tRNA synthetase, the 3' end of the gene for a novel protein similar to human KIBRA and two CpG islands, complete sequence Length = 181103 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tatatgcatgtacaactaca 96 |||||||||||||||||||| Sbjct: 15762 tatatgcatgtacaactaca 15743
>gb|AC139749.4| Homo sapiens chromosome 11, clone RP13-870H17, complete sequence Length = 131676 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccagttctgaagcacccag 490 |||||||||||||||||||| Sbjct: 37562 gccagttctgaagcacccag 37581
>gb|AC103814.2| Homo sapiens chromosome 18, clone CTD-3111I19, complete sequence Length = 172461 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttacaaaaggggaagtacag 63 |||||||||||||||||||| Sbjct: 25202 ttacaaaaggggaagtacag 25221
>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2, complete sequence Length = 173663 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 acagttaattaagaatatat 79 |||||||||||||||||||| Sbjct: 154371 acagttaattaagaatatat 154390
>gb|AC006067.4| Arabidopsis thaliana chromosome 2 clone T13P21 map mi398, complete sequence Length = 126337 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 agttaattaagaatatatat 81 |||||||||||||||||||| Sbjct: 10148 agttaattaagaatatatat 10129
>gb|AC005398.3| Arabidopsis thaliana chromosome 2 clone T6B13 map mi398, complete sequence Length = 92524 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 agttaattaagaatatatat 81 |||||||||||||||||||| Sbjct: 86537 agttaattaagaatatatat 86518
>gb|AC091549.11| Homo sapiens chromosome 8, clone RP11-343D20, complete sequence Length = 179187 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 taattaagaatatatatgca 84 |||||||||||||||||||| Sbjct: 48715 taattaagaatatatatgca 48696
>dbj|AK139746.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020014N01 product:hypothetical protein, full insert sequence Length = 3387 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 635 caaaaggggaagtacagataatta 612
>dbj|AK137307.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630003J19 product:hypothetical protein, full insert sequence Length = 1774 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tatatgcatgtacaactaca 96 |||||||||||||||||||| Sbjct: 706 tatatgcatgtacaactaca 687
>gb|AC139053.15| Mus musculus chromosome 1, clone RP23-2I19, complete sequence Length = 232850 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 124354 caaaaggggaagtacagataatta 124331
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 agcggcacgtcgccgtcgaggtac 328 ||||||||||||||| |||||||| Sbjct: 1158189 agcggcacgtcgccgacgaggtac 1158212
>gb|AF167425.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase (ACS5) and LE5-7.2 genes, complete cds Length = 14362 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 attaagaatatatatgcatg 86 |||||||||||||||||||| Sbjct: 6407 attaagaatatatatgcatg 6426
>tpg|BK005281.1| TPA: TPA_exp: Apis mellifera troponin T (TpnT) gene, complete cds, alternatively spliced Length = 12066 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 gtacagttaattaagaatatatat 81 ||||||||||| |||||||||||| Sbjct: 6632 gtacagttaatcaagaatatatat 6609
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 agctccgggagcggcacgtcgccg 319 |||||||||||||||||| ||||| Sbjct: 758561 agctccgggagcggcacggcgccg 758538
>gb|AC090155.10| Homo sapiens chromosome 8, clone RP11-738G5, complete sequence Length = 192053 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 taattaagaatatatatgca 84 |||||||||||||||||||| Sbjct: 38628 taattaagaatatatatgca 38647
>gb|AC125005.15| Mus musculus chromosome 5, clone RP23-370D2, complete sequence Length = 176900 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 99271 caaaaggggaagtacagataatta 99248 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 91876 caaaaggggaagtacagataatta 91853
>gb|AE005081.1| Halobacterium sp. NRC-1 section 112 of 170 of the complete genome Length = 19293 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tcgccgtcgaggtactgcat 333 |||||||||||||||||||| Sbjct: 2440 tcgccgtcgaggtactgcat 2459
>emb|BX545907.3| Mouse DNA sequence from clone RP23-300J4 on chromosome X, complete sequence Length = 49351 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 39104 caaaaggggaagtacagataatta 39127
>dbj|AK107678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-A04, full insert sequence Length = 2366 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 gggtgcgagcacaagagccctagcttgagcgc 399 ||||||| ||||| |||||| ||||||||||| Sbjct: 418 gggtgcgcgcacatgagccccagcttgagcgc 449
>dbj|AK102285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089I06, full insert sequence Length = 2454 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 gggtgcgagcacaagagccctagcttgagcgc 399 ||||||| ||||| |||||| ||||||||||| Sbjct: 2029 gggtgcgcgcacatgagccccagcttgagcgc 1998
>gb|AC154552.2| Mus musculus BAC clone RP23-414P13 from 13, complete sequence Length = 187806 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 67000 caaaaggggaagtacagataatta 67023
>dbj|AK068307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136I11, full insert sequence Length = 2237 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 368 gggtgcgagcacaagagccctagcttgagcgcaaggcatgcctc 411 ||||| |||||||||||||| | ||||||| | ||||| ||||| Sbjct: 1867 gggtgtgagcacaagagccccaacttgagcaccaggcaagcctc 1824
>gb|AC117584.11| Mus musculus chromosome 3, clone RP23-151D16, complete sequence Length = 242832 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atcagcaagtgaccccttgt 470 |||||||||||||||||||| Sbjct: 69998 atcagcaagtgaccccttgt 70017
>emb|AJ509369.1|AME509369 Apis mellifera microsatellite marker Am0138=AP097 Length = 247 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 gtacagttaattaagaatatatat 81 ||||||||||| |||||||||||| Sbjct: 184 gtacagttaatcaagaatatatat 161
>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence Length = 175691 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaatatatatgcatgtaca 90 |||||||||||||||||||| Sbjct: 104298 agaatatatatgcatgtaca 104279
>emb|AL671741.9| Mouse DNA sequence from clone RP23-336M6 on chromosome 3, complete sequence Length = 179909 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 atcagcaagtgaccccttgt 470 |||||||||||||||||||| Sbjct: 135952 atcagcaagtgaccccttgt 135933
>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete sequence Length = 172327 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 ttaagaatatatatgcatgtacaa 91 ||||||||||||||| |||||||| Sbjct: 94943 ttaagaatatatatgtatgtacaa 94920
>emb|AL663106.18| Mouse DNA sequence from clone CT7-314H19 on chromosome 3, complete sequence Length = 177223 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atcagcaagtgaccccttgt 470 |||||||||||||||||||| Sbjct: 130450 atcagcaagtgaccccttgt 130469
>emb|AL669901.26| Mouse DNA sequence from clone RP23-35N5 on chromosome X, complete sequence Length = 226126 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagtta 66 |||||||||||||||||||| Sbjct: 108669 caaaaggggaagtacagtta 108650
>emb|AL844181.9| Mouse DNA sequence from clone RP23-128E7 on chromosome X, complete sequence Length = 139178 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 atatatatgcatgtacaact 93 |||||||||||||||||||| Sbjct: 41449 atatatatgcatgtacaact 41430
>emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chromosome 4, complete sequence Length = 93508 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 caaaaggggaagtacagttaatta 70 ||||||||||||||||| |||||| Sbjct: 52352 caaaaggggaagtacagataatta 52329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,679,602 Number of Sequences: 3902068 Number of extensions: 4679602 Number of successful extensions: 93686 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92892 Number of HSP's gapped (non-prelim): 770 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
