>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 415 EPKA*STPEPQTDPQANTKAAAKPQPPAGVVQAEAAGVRT 296
           EPK  + PEP+ +P+   K  AKP+P      A A   RT
Sbjct: 125 EPKVEAKPEPKPEPKPEPKVEAKPEPKPEPKPAAAPAPRT 164

>ARO9_YEAST (P38840) Aromatic amino acid aminotransferase 2 (EC 2.6.1.-)|
           (Aromatic amino acid aminotransferase II)
          Length = 513

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 70  DPYVHRYACKYAPHERVHKQYHFTTHTTNSDTADYSMDGYLT 195
           DPY + Y   Y P E +   YH +  TT     D+ M  +LT
Sbjct: 261 DPYGYLYFPSYNPQEPLENPYHSSDLTTERYLNDFLMKSFLT 302

>E13B_WHEAT (P52409) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 648 PVYSLDTVADRANPKPDPQPNPRTNP 571
           PVY L  + D A+  P P PNP  NP
Sbjct: 340 PVYDLGLLRDGASVAPTPSPNPSPNP 365

>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5038

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 636  LDTVADRANPKPDPQPNPRTNPEKPDRD 553
            +D V +   P+P+P+P P   PEK D +
Sbjct: 4480 VDGVEEELPPEPEPEPEPELEPEKADAE 4507

>YPJA_ECOLI (P52143) Hypothetical outer membrane protein ypjA|
          Length = 1569

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
 Frame = -2

Query: 612  NPKPDPQPNPRTNPE-KPD 559
            NPKPDP+P+P+ +P  KPD
Sbjct: 1234 NPKPDPKPDPKPDPNPKPD 1252

>PRD15_HUMAN (P57071) PR domain zinc finger protein 15 (PR domain-containing|
           protein 15) (Zinc finger protein 298)
          Length = 1507

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 23/75 (30%), Positives = 33/75 (44%)
 Frame = -1

Query: 430 SLRQGEPKA*STPEPQTDPQANTKAAAKPQPPAGVVQAEAAGVRTSRWLRQAPQLS*RAG 251
           +LR   P   S P P         AA +P PP GVV AEA G       R  P    R G
Sbjct: 75  ALRAARPPGSSPPRP---------AAPRPPPPGGVV-AEAPGDVVIPRPRVQPMRVARGG 124

Query: 250 SWSMDAMIKQSVTYT 206
            W+ +   +++ +++
Sbjct: 125 PWTPNPAFREAESWS 139

>PERT_BORPA (P24328) Pertactin precursor (P.95) [Contains: Outer membrane|
           protein P.70]
          Length = 922

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
 Frame = -1

Query: 412 PKA*STPEPQTDPQANTKAAAKPQPPAG---------VVQAEAAGVRTSRWLRQAPQLS* 260
           P+    P+P   PQ   +A A PQPPAG          V     G+ ++ W  ++  LS 
Sbjct: 589 PQPPQPPQPPQPPQRQPEAPA-PQPPAGRELSAAANAAVNTGGVGLASTLWYAESNALSK 647

Query: 259 RAG 251
           R G
Sbjct: 648 RLG 650

>TONB_ENTAE (P46383) Protein tonB|
          Length = 243

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -2

Query: 648 PVYSLDTVADRANPKPDPQPNPRTNPEK---PDRDV 550
           P   +  V  +  PKP P+P P+  PEK   P R+V
Sbjct: 83  PPKEVPVVIHKPEPKPKPKPKPKPKPEKKVEPKREV 118

>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)|
          Length = 3164

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 442  LTVSSLRQGEPKA*STPEPQTDPQANTKAAAKPQP 338
            LTVS L   +P+    P+PQ  PQ   +   +PQP
Sbjct: 2903 LTVSRLSAPQPQPQPQPQPQPQPQPQPQPQPQPQP 2937

>PERT_BORBR (Q03035) Pertactin precursor (P.94) [Contains: Outer membrane|
           protein P.68]
          Length = 916

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
 Frame = -1

Query: 394 PEPQTDPQANTKAAAKPQPPAG---------VVQAEAAGVRTSRWLRQAPQLS*RAG 251
           P+P   PQ   +A A PQPPAG          V     G+ ++ W  ++  LS R G
Sbjct: 589 PQPPQPPQRQPEAPA-PQPPAGRELSAAANAAVNTGGVGLASTLWYAESNALSKRLG 644

>TTLL4_HUMAN (Q14679) Tubulin--tyrosine ligase-like protein 4|
          Length = 1199

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 49  LEIQAYSDPYVHRYACKYAPHERV--HKQYHFTTHTTNSDTADY 174
           L I  +SD  V   +CKY+P  +   +K  H T ++ N   A+Y
Sbjct: 777 LRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNAEY 820


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,360,800
Number of Sequences: 219361
Number of extensions: 1369867
Number of successful extensions: 7227
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6947
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)