ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog 30 9.1

>BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog|
          Length = 1282

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 613 HLRQCSYHGCCRDGEEHLDDQQARIHGVPQLLRVNQPSRRPQHR 482
           +LR+  Y     D EE  DD    + G   L RVNQP R  +H+
Sbjct: 688 NLRKLIYGTVTEDNEEEDDDTLEELGG---LFRVNQPDRECKHK 728


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,490,914
Number of Sequences: 219361
Number of extensions: 1580514
Number of successful extensions: 3695
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3653
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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