Clone Name | rbah62o07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2517 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 2201 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 2142 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 2141 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 2082 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggacc 544 || ||||||||||| |||||||||||||| |||||||| || ||||||||| ||||||| Sbjct: 2081 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctggttgcggact 2022 Query: 545 gccattatgaggctttttcgtag 567 | || |||||||||||| ||||| Sbjct: 2021 gtcaatatgaggcttttccgtag 1999
>ref|XM_506818.1| PREDICTED Oryza sativa (japonica cultivar-group), P0415B12.41 mRNA Length = 2763 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 2453 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 2394 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 2393 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 2334 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggacc 544 || ||||||||||| |||||||||||||| |||||||| || ||||||||| ||||||| Sbjct: 2333 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctggttgcggact 2274 Query: 545 gccattatgaggctttttcgtag 567 | || |||||||||||| ||||| Sbjct: 2273 gtcaatatgaggcttttccgtag 2251
>dbj|AK067696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F19, full insert sequence Length = 2516 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 2200 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 2141 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 2140 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 2081 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggacc 544 || ||||||||||| |||||||||||||| |||||||| || ||||||||| ||||||| Sbjct: 2080 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctggttgcggact 2021 Query: 545 gccattatgaggctttttcgtag 567 | || |||||||||||| ||||| Sbjct: 2020 gtcaatatgaggcttttccgtag 1998
>dbj|AK066073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P13, full insert sequence Length = 2763 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 2453 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 2394 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 2393 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 2334 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggacc 544 || ||||||||||| |||||||||||||| |||||||| || ||||||||| ||||||| Sbjct: 2333 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctggttgcggact 2274 Query: 545 gccattatgaggctttttcgtag 567 | || |||||||||||| ||||| Sbjct: 2273 gtcaatatgaggcttttccgtag 2251
>dbj|AK060822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B02, full insert sequence Length = 1625 Score = 157 bits (79), Expect = 5e-35 Identities = 172/203 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 1341 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 1282 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 1281 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 1222 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggacc 544 || ||||||||||| |||||||||||||| |||||||| || ||||||||| ||||||| Sbjct: 1221 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctggttgcggact 1162 Query: 545 gccattatgaggctttttcgtag 567 | || |||||||||||| ||||| Sbjct: 1161 gtcaatatgaggcttttccgtag 1139
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| Sbjct: 34594 tactccctccgtaaactaatataagagcatttagaatactactttagtaatctaaacact 34535 Query: 107 cttatattagtttatagagggagtactatttttct 141 |||||||||||||| |||||||||| ||| ||||| Sbjct: 34534 cttatattagtttacagagggagtattatatttct 34500 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| |||||||||||||| || |||||| |||| ||||| ||| || || Sbjct: 34510 tactccctctgtaaactaatataagagtgtttagattactaaagtagtattctaaatgct 34569 Query: 107 cttatattagtttatagagggagta 131 |||||||||||||| ||||||||| Sbjct: 34570 cttatattagtttacggagggagta 34594
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 137 bits (69), Expect = 4e-29 Identities = 81/85 (95%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 150192 tactccctccgtaaactaatataagagcatttagaacactactttagtaatttaaacact 150251 Query: 107 cttatattagtttatagagggagta 131 |||||||||||||| |||||||||| Sbjct: 150252 cttatattagtttacagagggagta 150276 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 gtaaactaatataaaagcatttaga 81 ||||||||||||||||| ||||||| Sbjct: 152560 gtaaactaatataaaagaatttaga 152536 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataa 70 ||||||||| |||||||||||||| Sbjct: 150276 tactccctctgtaaactaatataa 150253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 3e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 19244044 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 19243985 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 19243984 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 19243925 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 19243924 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctg 19243875
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 131 bits (66), Expect = 3e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 11842 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 11783 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 11782 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 11723 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 11722 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctg 11673
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 131 bits (66), Expect = 3e-27 Identities = 144/170 (84%) Strand = Plus / Minus Query: 365 atcagctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagc 424 ||||||||||| || || |||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 142293 atcagctggtcaacgacgccaggatcagcaagggtgcttgtgtcaccaagttcatccagc 142234 Query: 425 tgcctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttggg 484 || | ||||||||||| |||| || || ||||| ||||||||||| | || || || Sbjct: 142233 tgttttgaggcaattttgcgcagaatcctgcgcattatcttaccgcttctcgttttagga 142174 Query: 485 agccctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 142173 agtcctggtgcccagtggatcttgtcaggagctgcaaatgccccaatctg 142124
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons 1-3 Length = 2155 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 1253 gtactccccctgtaaactaatataaaagcatttagaacactactttagtaatctaaacgc 1312 Query: 106 tcttatattagtttatagagggagta 131 ||||||||||||||| |||||||||| Sbjct: 1313 tcttatattagtttacagagggagta 1338 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 ||||||||| |||||||||||||| ||| |||||| Sbjct: 1338 tactccctctgtaaactaatataagagcgtttaga 1304
>ref|XM_472384.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1899 Score = 127 bits (64), Expect = 4e-26 Identities = 166/200 (83%) Strand = Plus / Minus Query: 368 agctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagctgc 427 ||||||||||| || || || || || || ||||| ||||| || ||||| ||||||||| Sbjct: 1877 agctggtcgacgacgcctggttcggcgagcgtgctggtgtcgccgagctcgtccagctgc 1818 Query: 428 ctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttgggagc 487 ||||| || || ||||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 1817 ctggacgcgatcttccgcaggatcctccgcatgatcttgccgctccgcgtcttcgggagc 1758 Query: 488 cctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggaccgcc 547 || || ||||| ||||||||||| || || || ||||| |||||||||||||| || | | Sbjct: 1757 cccggcgcccagtggatcttgtccggcgccgcgaacgccccaatctggctgcgaacagtc 1698 Query: 548 attatgaggctttttcgtag 567 || | ||||||||| ||||| Sbjct: 1697 ataacgaggcttttccgtag 1678
>gb|AY090545.1| Deschampsia antarctica clone Dacor 2.0 acetyl CoA synthetase mRNA, 3' UTR and partial cds Length = 768 Score = 115 bits (58), Expect = 2e-22 Identities = 145/174 (83%) Strand = Plus / Minus Query: 370 ctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagctgcct 429 |||||| || ||||||||||||||||| ||||| |||||||||| ||||||| ||| | Sbjct: 675 ctggtccacgacaccaggatcagcaagagtgctgatgtcaccaagttcatccaactgttt 616 Query: 430 ggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttgggagccc 489 | ||||||||| ||||| ||||| ||||| ||||| || || || || || || || || Sbjct: 615 tgcggcaattttgcgcaagattctgcgcataatcttgccactgcgggttttcggaagtcc 556 Query: 490 tggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctggctgcggac 543 ||||||||| |||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 555 tggtgcccagtggatcttgtcaggagctgcaaatgccccaatctgattgcggac 502
>gb|AY104427.1| Zea mays PCO084078 mRNA sequence Length = 1245 Score = 115 bits (58), Expect = 2e-22 Identities = 181/222 (81%) Strand = Plus / Minus Query: 346 ctaactatcgctaagcgatatcagctggtcgaccacaccaggatcagcaagtgtgctcgt 405 ||||| || ||| ||||| || |||||||| || ||| |||| ||||| || ||||| | Sbjct: 982 ctaacaattgctgagcgaaataagctggtcaactacagcaggttcagcgagggtgcttat 923 Query: 406 gtcaccaagctcatccagctgcctggaggcaattttccgcaatattctccgcatgatctt 465 ||| ||||| |||||||| |||| | ||||| || ||||| || || ||||||||||| Sbjct: 922 gtccccaagttcatccagttgccgtgcagcaatcttgcgcaaaatccttcgcatgatctt 863 Query: 466 accgctccgtgtctttgggagccctggtgcccaatggatcttgtcaggtgctgcaaacgc 525 || ||||| || || || || || |||||||| |||||||||||||| |||||||| || Sbjct: 862 gccactccgggttttaggaagtcccggtgcccagtggatcttgtcaggagctgcaaatgc 803 Query: 526 gccaatctggctgcggaccgccattatgaggctttttcgtag 567 ||||||||| |||| || | ||||||||||||||||||||| Sbjct: 802 cccaatctggttgcgcactgtcattatgaggctttttcgtag 761
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene, nuclear gene encoding plastid protein, partial cds Length = 9285 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| ||| |||||||||||| |||||| |||| |||||| Sbjct: 6382 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 6441 Query: 107 cttatattagtttatagagggagtac 132 |||||||| ||||| ||||||||||| Sbjct: 6442 cttatattggtttacagagggagtac 6467 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||| ||||||| || |||||| ||||| |||| ||| ||| | Sbjct: 6467 gtactccctctgtaaaccaatataagagtgtttagatcactaaaatagtgttctaaacgc 6408 Query: 106 tcttatattagtttatagagggagta 131 ||||||||||||||| ||||||||| Sbjct: 6407 tcttatattagtttacggagggagta 6382
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Minus Query: 368 agctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagctgc 427 ||||||||||| || || || || || || ||||| ||||| || ||||| ||||||||| Sbjct: 61208 agctggtcgacgacgcctggttcggcgagcgtgctggtgtcgccgagctcgtccagctgc 61149 Query: 428 ctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttgggagc 487 ||||| || || ||||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 61148 ctggacgcgatcttccgcaggatcctccgcatgatcttgccgctccgcgtcttcgggagc 61089 Query: 488 cctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctg 534 || || ||||| ||||||||||| || || || ||||| |||||||| Sbjct: 61088 cccggcgcccagtggatcttgtccggcgccgcgaacgccccaatctg 61042
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Minus Query: 368 agctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagctgc 427 ||||||||||| || || || || || || ||||| ||||| || ||||| ||||||||| Sbjct: 153967 agctggtcgacgacgcctggttcggcgagcgtgctggtgtcgccgagctcgtccagctgc 153908 Query: 428 ctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttgggagc 487 ||||| || || ||||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 153907 ctggacgcgatcttccgcaggatcctccgcatgatcttgccgctccgcgtcttcgggagc 153848 Query: 488 cctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctg 534 || || ||||| ||||||||||| || || || ||||| |||||||| Sbjct: 153847 cccggcgcccagtggatcttgtccggcgccgcgaacgccccaatctg 153801
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Minus Query: 368 agctggtcgaccacaccaggatcagcaagtgtgctcgtgtcaccaagctcatccagctgc 427 ||||||||||| || || || || || || ||||| ||||| || ||||| ||||||||| Sbjct: 20091304 agctggtcgacgacgcctggttcggcgagcgtgctggtgtcgccgagctcgtccagctgc 20091245 Query: 428 ctggaggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctttgggagc 487 ||||| || || ||||||| || |||||||||||||| |||||||| ||||| |||||| Sbjct: 20091244 ctggacgcgatcttccgcaggatcctccgcatgatcttgccgctccgcgtcttcgggagc 20091185 Query: 488 cctggtgcccaatggatcttgtcaggtgctgcaaacgcgccaatctg 534 || || ||||| ||||||||||| || || || ||||| |||||||| Sbjct: 20091184 cccggcgcccagtggatcttgtccggcgccgcgaacgccccaatctg 20091138 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 agagggagtactatttttct 141 |||||||||||||||||||| Sbjct: 4369077 agagggagtactatttttct 4369096
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 101 bits (51), Expect = 2e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||||||||||||||||||||| ||| |||||| ||||| |||| |||| ||||| Sbjct: 6402 gtactccctccgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacac 6343 Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 6342 tcttatattagtttacagagggagtac 6316 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 43 tacgtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaa 102 ||||||||||||| |||||||||||||| || |||||| |||||||||||| |||| || Sbjct: 6313 tacgtactccctctgtaaactaatataagagtgtttagatcactactttagtgatctaaa 6372 Query: 103 cactcttatattagtttatagagggagtact 133 | |||||||||||||||| ||||||||||| Sbjct: 6373 cgctcttatattagtttacggagggagtact 6403
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||||| |||||||| ||||| |||| | |||| | |||| Sbjct: 201072 tactccctccgtaaactaatataaaaacatttagatcactattttacttatctaagcact 201013 Query: 107 cttatattagtttatagagggagtac 132 |||||||||||||| ||| ||||||| Sbjct: 201012 cttatattagtttacagatggagtac 200987 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||||||||| |||| || Sbjct: 29739 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 29798 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 29799 tcttatattagtttacagagggaatact 29826 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||| |||||||||||||| | | |||||| ||||| |||| |||| || |||| Sbjct: 29821 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 29762 Query: 110 atattagtttatagagggagtac 132 ||||||||||| ||||||||||| Sbjct: 29761 atattagtttacagagggagtac 29739
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA, complete cds Length = 975 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||||||||||||||||||||| || ||||||||||||||||||| |||| || | Sbjct: 725 gtactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgc 666 Query: 106 tcttatattagtttatagagggagta 131 | ||||||||||||| |||||||||| Sbjct: 665 ttttatattagtttacagagggagta 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||| Sbjct: 640 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 699 Query: 107 cttatattagtttatagagggagtac 132 |||||||||||||| |||||||||| Sbjct: 700 cttatattagtttacggagggagtac 725
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene, complete cds Length = 1003 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||||||||||||||||||||| || ||||||||||||||||||| |||| || | Sbjct: 817 gtactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgc 758 Query: 106 tcttatattagtttatagagggagta 131 | ||||||||||||| |||||||||| Sbjct: 757 ttttatattagtttacagagggagta 732 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||| Sbjct: 732 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 791 Query: 107 cttatattagtttatagagggagtac 132 |||||||||||||| |||||||||| Sbjct: 792 cttatattagtttacggagggagtac 817
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA, complete cds Length = 1151 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||||||||||||||||||||| || ||||||||||||||||||| |||| || | Sbjct: 715 gtactccctccgtaaactaatataagagtgtttagaacactactttagtgatctaaatgc 656 Query: 106 tcttatattagtttatagagggagta 131 | ||||||||||||| |||||||||| Sbjct: 655 ttttatattagtttacagagggagta 630 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||| Sbjct: 630 tactccctctgtaaactaatataaaagcatttagatcactaaagtagtgttctaaacact 689 Query: 107 cttatattagtttatagagggagtac 132 |||||||||||||| |||||||||| Sbjct: 690 cttatattagtttacggagggagtac 715
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494 Length = 2570 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| ||| ||||||| |||| |||| |||| ||| || Sbjct: 1473 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 1414 Query: 107 cttatattagtttatagagggagtacta 134 |||||||||||||| ||||||||||||| Sbjct: 1413 cttatattagtttacagagggagtacta 1386 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| ||| |||||| ||||| ||||||| ||| ||| | Sbjct: 1388 gtactccctctgtaaactaatataagagcgtttagatcactattttagtattctaaacgc 1447 Query: 106 tcttatattagtttatagagggagta 131 ||||||||||||||| ||||||||| Sbjct: 1448 tcttatattagtttacggagggagta 1473
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||||| ||||||||||||||||||||||||| || |||||||||| ||| ||| | Sbjct: 103751 gtactccctttgtaaactaatataaaagcatttagatcattactttagtattctaaacgc 103692 Query: 106 tcttatattagttta 120 ||||||||||||||| Sbjct: 103691 tcttatattagttta 103677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 ||||||||||||||||||||| ||| ||||||| |||| || | |||| || || || Sbjct: 103669 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 103728 Query: 110 atattagtttatagagggagtact 133 ||||||||||| | |||||||||| Sbjct: 103729 atattagtttacaaagggagtact 103752
>gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 839 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/94 (88%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 40 atatacgtactccctccgtaaactaatataaaagcatttagaacactactttagtaatc- 98 ||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||||| Sbjct: 582 atatacgtacttcctccgtaaaccaatatacgagcatttagaacactattttagtaatct 523 Query: 99 -tgaacactcttatattagtttatagagggagta 131 | |||||| ||||||||||||| | |||||||| Sbjct: 522 ataaacacttttatattagtttacaaagggagta 489 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 42 atacgtactccctccgtaaactaatataaaag 73 |||| |||||||| ||||||||||||||||| Sbjct: 484 atacttactccctttgtaaactaatataaaag 515
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds Length = 9585 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/92 (88%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactt--tagtaatctgaacactc 107 ||||| |||||| ||||||||||||||||||| |||||||| ||||||| | ||||||| Sbjct: 9163 tcccttcgtaaattaatataaaagcatttagatcactactttatagtaatttaaacactc 9222 Query: 108 ttatattagtttatagagggagtactattttt 139 |||||||| |||| |||||||||||| |||| Sbjct: 9223 ttatattaatttacggagggagtactagtttt 9254 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataa 70 |||||||||||||||| |||||||| Sbjct: 9247 gtactccctccgtaaattaatataa 9223
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6 Length = 4034 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| |||||||||||||| |||||||||| ||||| ||||||||| ||| || Sbjct: 2795 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 2736 Query: 107 cttatattagtttatagagggagta 131 |||||||||||||| ||||||||| Sbjct: 2735 cttatattagtttacggagggagta 2711 Score = 89.7 bits (45), Expect = 9e-15 Identities = 75/85 (88%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| ||| |||||| |||| |||||| |||| || || Sbjct: 2711 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 2770 Query: 107 cttatattagtttatagagggagta 131 |||||||||||||| |||||||||| Sbjct: 2771 cttatattagtttacagagggagta 2795
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 952 taatataaaaacatttagaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 884 tactccatctgtaaactaatataaaagcgtttaga 918
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 60 aactaatataaaagcatttagaacactactttagtaatctgaacactcttatattagttt 119 ||||||||||| ||| |||||| |||||||||||| |||| ||| ||||||||||||||| Sbjct: 7548 aactaatataagagcgtttagatcactactttagtgatctaaacgctcttatattagttt 7607 Query: 120 atagagggagta 131 | |||||||||| Sbjct: 7608 acagagggagta 7619 Score = 65.9 bits (33), Expect = 1e-07 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| |||||||||||||| ||| |||||| ||||| |||| |||| ||| || Sbjct: 7619 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 7560 Query: 107 cttatattagtttatagagggagtactat 135 |||||||||||| | | |||||||||||| Sbjct: 7559 cttatattagttcaca-agggagtactat 7532
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds Length = 9024 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||||||||| |||||||| ||| |||||| ||||||||||| |||| ||| || Sbjct: 2811 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 2870 Query: 107 cttatattagtttatagagggagta 131 |||||| ||||||| ||| |||||| Sbjct: 2871 cttatagtagtttacagacggagta 2895 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||| || |||||||| ||||| ||| |||||| ||||| ||||||||| ||| || Sbjct: 2895 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 2836 Query: 107 cttatattagtttatagagggagta 131 ||||||||| |||| ||||||||| Sbjct: 2835 cttatattaatttacggagggagta 2811
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 410 ccaagctcatccagctgcctggaggcaattttccgcaatattctccgcatgatcttaccg 469 ||||| ||||| |||||||| || |||||||| | | ||||| | ||| ||||| ||| Sbjct: 48042 ccaagttcatctagctgcctagaagcaatttttctaagaattcttctcattatctttccg 47983 Query: 470 ctccgtgtctttgggagccctggtgcccaatggatcttgtcaggtgctgcaaa 522 |||| ||| |||||||| || |||||||||||||| ||||||||||||||||| Sbjct: 47982 ctccttgtttttgggaggccaggtgcccaatggattttgtcaggtgctgcaaa 47930
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds Length = 7010 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||||||||| |||||||| ||| |||||| ||||||||||| |||| ||| || Sbjct: 1567 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 1626 Query: 107 cttatattagtttatagagggagta 131 |||||| ||||||| ||| |||||| Sbjct: 1627 cttatagtagtttacagacggagta 1651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||| || |||||||| ||||| ||| |||||| ||||| ||||||||| ||| || Sbjct: 1651 tactccgtctgtaaactactataagagcgtttagatcactaaagtagtaatctaaacgct 1592 Query: 107 cttatattagtttatagagggagta 131 ||||||||| |||| ||||||||| Sbjct: 1591 cttatattaatttacggagggagta 1567
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||||| |||||||||||||||||||||||| | ||| || ||||||||||||| | Sbjct: 905 taatataaaaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 846 Query: 123 gagggagta 131 || |||||| Sbjct: 845 gatggagta 837 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcattta 79 |||||| || |||||||||||||||||| |||| Sbjct: 837 tactccatctgtaaactaatataaaagcgttta 869
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||||| |||||| ||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 952 taatataaaaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 884 tactccatctgtaaactaatataaaagcgtttaga 918
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||||||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 952 taatataagaacatttagaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 884 tactccatctgtaaactaatataaaagcgtttaga 918
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||||||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 952 taatataagaacatttagaacactactttagtaatctaaacgcttttatattagtttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 884 tactccatctgtaaactaatataaaagcgtttaga 918
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||||| |||||||||||||||||||||||| | ||| || ||||||||||||| | Sbjct: 952 taatataaaaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcattta 79 |||||| || |||||||||||||||||| |||| Sbjct: 884 tactccatctgtaaactaatataaaagcgttta 916
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||| || |||||||||||||||| | |||||| || ||||||||| |||| ||| | Sbjct: 1700 gtactccttctgtaaactaatataaaaacgtttagatcattactttagttatctaaacgc 1759 Query: 106 tcttatattagtttatagagggagtact 133 |||||||||| || || ||||||||||| Sbjct: 1760 tcttatattacttcatggagggagtact 1787
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial cds Length = 1438 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||||||||| |||| || Sbjct: 277 gtactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||| |||||||||||||| | | |||||| ||||| |||| |||| || |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 254 Query: 110 atattagtttatagagggagtac 132 ||||||||||| ||||||||||| Sbjct: 255 atattagtttacagagggagtac 277
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||||||||| |||||||| || ||| || ||||| |||||| |||| ||| | Sbjct: 829 gtactccctccgtaaattaatataagagtgttttgatcactattttagtgatctaaacgc 770 Query: 106 tcttatattagtttatagagggagt 130 ||||||||||||||| |||||||| Sbjct: 769 tcttatattagtttactgagggagt 745 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 48 actccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactc 107 |||||||| |||||||||||||| ||| |||||| ||||| |||| ||| ||||||| Sbjct: 745 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 804 Query: 108 ttatattagtttatagagggagtac 132 |||||||| |||| |||||||||| Sbjct: 805 ttatattaatttacggagggagtac 829
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||||||||||||||||||||| | ||| || ||||||||||||| | Sbjct: 10777 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 10718 Query: 123 gagggagta 131 || |||||| Sbjct: 10717 gatggagta 10709 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcattta 79 |||||| || |||||||||||||||||| |||| Sbjct: 10709 tactccatctgtaaactaatataaaagcgttta 10741
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||||||||||||||||||||| | ||| || ||||||||||||| | Sbjct: 62498 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 62439 Query: 123 gagggagta 131 || |||||| Sbjct: 62438 gatggagta 62430 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcattta 79 |||||| || |||||||||||||||||| |||| Sbjct: 62430 tactccatctgtaaactaatataaaagcgttta 62462
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| |||||||||||||| |||||||| | || || |||| |||| |||||| Sbjct: 738 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 797 Query: 107 cttatattagtttatagagggagta 131 |||||||||||||| ||||||||| Sbjct: 798 cttatattagtttacggagggagta 822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| || |||||| ||||| |||| | || | || || Sbjct: 822 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 763 Query: 107 cttatattagtttatagagggagta 131 |||||||||||||| ||||||||| Sbjct: 762 cttatattagtttaccgagggagta 738
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||||||||||||||||||||| | ||| || ||||||||||||| | Sbjct: 11547 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 11488 Query: 123 gagggagta 131 || |||||| Sbjct: 11487 gatggagta 11479 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcattta 79 |||||| || |||||||||||||||||| |||| Sbjct: 11479 tactccatctgtaaactaatataaaagcgttta 11511
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| ||||| ||||||| ||| |||||| |||||||||||| |||| ||| || Sbjct: 21737 tactccctctgtaaagaaatataagagcgtttagatcactactttagtgatctaaacgct 21678 Query: 107 cttatattagtttatagagggagta 131 |||||||| |||| |||||||||| Sbjct: 21677 cttatatttatttacagagggagta 21653
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 953 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 894 Query: 123 gagggagta 131 || |||||| Sbjct: 893 gatggagta 885 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 885 tactccatctgtaaactaatataaaagcgtttaga 919
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 953 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 894 Query: 123 gagggagta 131 || |||||| Sbjct: 893 gatggagta 885 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 885 tactccatctgtaaactaatataaaagcgtttaga 919
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || ||||||||||||| | Sbjct: 953 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattagtttaca 894 Query: 123 gagggagta 131 || |||||| Sbjct: 893 gatggagta 885 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 885 tactccatctgtaaactaatataaaagcgtttaga 919
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||||| |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 952 taatataaaaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||||||||||||||||||||| | ||| || ||||||||||||| | Sbjct: 952 taatataagaacatttagaacactactttagtaatttaaacgcttttatattagtttaca 893 Query: 123 gagggagta 131 || |||||| Sbjct: 892 gatggagta 884 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcattta 79 |||||| || |||||||||||||||||| |||| Sbjct: 884 tactccatctgtaaactaatataaaagcgttta 916
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase (pepC) gene, exons 1, 2 and partial cds Length = 1117 Score = 71.9 bits (36), Expect = 2e-09 Identities = 70/80 (87%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||||||||||||||||||| |||||||||| |||||||| | | |||| || || Sbjct: 614 tactccctccgtaaactaatataagagcatttagatcactacttaa-tgatctaaatgct 556 Query: 107 cttatattagtttatagagg 126 ||||||||||||| ||||| Sbjct: 555 tttatattagtttacagagg 536 Score = 56.0 bits (28), Expect = 1e-04 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 52 cctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactcttat 111 |||| ||||||||||||||||||||||||| || || |||| |||| || ||||||| Sbjct: 536 cctctgtaaactaatataaaagcatttagatcatta-agtagtgatctaaatgctcttat 594 Query: 112 attagtttatagagggagta 131 ||||||||| ||||||||| Sbjct: 595 attagtttacggagggagta 614
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene, partial cds Length = 1439 Score = 71.9 bits (36), Expect = 2e-09 Identities = 76/88 (86%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||||||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataaga-cttttagatcactactttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 54.0 bits (27), Expect = 5e-04 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||| |||||||||||||| | | |||||| ||||| |||| |||| || | |||| Sbjct: 195 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaa-agtctt 253 Query: 110 atattagtttatagagggagtac 132 ||||||||||| ||||||||||| Sbjct: 254 atattagtttacagagggagtac 276
>emb|X98506.1|STACS S.tuberosum mRNA for acetyl-CoA synthetase Length = 2383 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 404 gtgtcaccaagctcatccagctgcctggaggcaattttccgcaatattctccgcatgatc 463 ||||| ||||||||||| | ||||||||| || ||||||| || ||||| | ||| || Sbjct: 2108 gtgtccccaagctcatctaactgcctggaagcgattttcctcagaattcttctcattatt 2049 Query: 464 ttaccgctccgtgtctttgggagccctggtgcccaatggatcttgtcaggtgctgcaaac 523 || || || | |||||||| || |||||||||||||| |||||||| || |||||||| Sbjct: 2048 ttcccacttctcgtctttggaagacctggtgcccaatgtatcttgtctggcgctgcaaaa 1989 Query: 524 gcgccaatctg 534 || |||||||| Sbjct: 1988 gccccaatctg 1978
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 67.9 bits (34), Expect = 3e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 48 actccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactc 107 ||||||||||||||||||||||| || |||||| ||| | |||| | |||| ||| ||| Sbjct: 177661 actccctccgtaaactaatataagagagtttagatcacaattttaatgatctcaacgctc 177720 Query: 108 ttatattagtttatagagggagtactattt 137 ||||||||||||| | ||||| || ||||| Sbjct: 177721 ttatattagtttacaaagggaatagtattt 177750 Score = 40.1 bits (20), Expect = 7.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 96 atctgaacactcttatattagtttatagagggagtactattttt 139 |||| ||| |||||||||||||||| |||||||| ||||||| Sbjct: 177695 atctaaactctcttatattagtttacggagggagtggtattttt 177652
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 |||||||| | ||||||||||||||| ||||||||| |||| || |||||| || ||| Sbjct: 89631 tactcccttcttaaactaatataaaaacatttagaaaactaaaataataatctaaatact 89572 Query: 107 cttatattagtttatagagggagtac 132 ||||||||||||| ||| ||||||| Sbjct: 89571 gttatattagtttacagaaggagtac 89546 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcatttaga 81 ||||||| || |||||||||||||| || ||||||| Sbjct: 89546 gtactccttctgtaaactaatataacagtatttaga 89581
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||||||||| ||||||| ||| ||||| |||||||| ||| |||||||| || Sbjct: 4947 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 5006 Query: 107 cttatattagttta 120 |||||||| ||||| Sbjct: 5007 cttatatttgttta 5020
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||||||||| ||||||| ||| ||||| |||||||| ||| |||||||| || Sbjct: 4716 tactccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctgaacgct 4775 Query: 107 cttatattagttta 120 |||||||| ||||| Sbjct: 4776 cttatatttgttta 4789
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 76 tttagaacactactttagtaatctgaacactcttatattagtttatagagggagtact 133 |||||| |||||||||||| |||| || |||||||||||||||| |||||||||||| Sbjct: 971 tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagtact 1028 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacacta 87 |||||||||| |||||||||||||| ||| |||||| ||||| Sbjct: 1027 gtactccctctgtaaactaatataagagcttttagatcacta 986 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ctcttatattagtttatagagggagtac 132 |||||||||||||||| |||||||||| Sbjct: 961 ctcttatattagtttaaggagggagtac 934
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 16758 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 16699 Query: 123 gagggagta 131 || |||||| Sbjct: 16698 gatggagta 16690
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 123 gagggagta 131 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| |||| |||||||||||||| ||| || ||||||||||||| | Sbjct: 953 taatataacaacatttaaaacattactttagtaatctaaacgcttttatattagtttaca 894 Query: 123 gagggagta 131 || |||||| Sbjct: 893 gatggagta 885 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 885 tactccatctgtaaactaatataaaagcgtttaga 919
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| |||| |||||||||||||| ||| || ||||||||||||| | Sbjct: 953 taatataacaacatttaaaacattactttagtaatctaaacgcttttatattagtttaca 894 Query: 123 gagggagta 131 || |||||| Sbjct: 893 gatggagta 885 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttaga 81 |||||| || |||||||||||||||||| |||||| Sbjct: 885 tactccatctgtaaactaatataaaagcgtttaga 919
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 123 gagggagta 131 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 123 gagggagta 131 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 123 gagggagta 131 || |||||| Sbjct: 891 gatggagta 883
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 951 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 892 Query: 123 gagggagta 131 || |||||| Sbjct: 891 gatggagta 883
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds Length = 4768 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 1190 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 1132 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 1131 tcttatattagtttacagagggaatact 1104 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 1164 tcttatattagtttacagagggagtac 1190
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial cds Length = 1437 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein (rga2) gene, partial cds Length = 1436 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene, partial cds Length = 1438 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial cds Length = 1435 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial cds Length = 1438 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial cds Length = 1438 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial cds Length = 1437 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene, partial cds Length = 1437 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 275 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 217 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 216 tcttatattagtttacagagggaatact 189 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 249 tcttatattagtttacagagggagtac 275
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial cds Length = 1436 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 275 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 217 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 216 tcttatattagtttacagagggaatact 189 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 249 tcttatattagtttacagagggagtac 275
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial cds Length = 1437 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 276 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 218 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 250 tcttatattagtttacagagggagtac 276
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 63.9 bits (32), Expect = 5e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacac 105 |||||||||| |||||||||||||| | | |||||| |||||| ||||| |||| || Sbjct: 47494 gtactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaagg 47552 Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 47553 tcttatattagtttacagagggaatact 47580 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 47520 tcttatattagtttacagagggagtac 47494
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein (rga2) gene, partial cds Length = 1441 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 46 gtactccctccgtaaactaatataaaagcatttagaacactact--ttagtaatctgaac 103 |||||||||| |||||||||||||| | | |||||| ||||||| ||||| |||| || Sbjct: 279 gtactccctctgtaaactaatataagaccttttagatcactactacttagtgatctaaaa 220 Query: 104 actcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 219 ggtcttatattagtttacagagggaatact 190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtac 132 ||||||||||||||| ||||||||||| Sbjct: 253 tcttatattagtttacagagggagtac 279
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8 Length = 70098 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 449 attctccgcatgatcttaccgctccgtgtctttgggagccctggtgcccaatggatcttg 508 ||||||| ||| ||||| ||||| | |||||||| | ||||||||||||||| || || Sbjct: 64880 attctcctcattatctttccgcttctcgtctttggcaaccctggtgcccaatgtattctg 64939 Query: 509 tcaggtgctgcaaacgcgccaatctgg 535 || ||||||||||| || ||||||||| Sbjct: 64940 tccggtgctgcaaaagccccaatctgg 64966
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 63 taatataaaagcatttagaacactactttagtaatctgaacactcttatattagtttata 122 |||||||| | |||||| ||||||||||||||||||| ||| || |||||||| |||| | Sbjct: 950 taatataagaacatttaaaacactactttagtaatctaaacgcttttatattaatttaca 891 Query: 123 gag 125 ||| Sbjct: 890 gag 888
>ref|NM_123046.2| Arabidopsis thaliana catalytic AT5G36880 transcript variant AT5G36880.1 mRNA, complete cds Length = 2521 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 449 attctccgcatgatcttaccgctccgtgtctttgggagccctggtgcccaatggatcttg 508 ||||||| ||| ||||| ||||| | |||||||| | ||||||||||||||| || || Sbjct: 2157 attctcctcattatctttccgcttctcgtctttggcaaccctggtgcccaatgtattctg 2098 Query: 509 tcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| || |||||||| Sbjct: 2097 tccggtgctgcaaaagccccaatctg 2072
>ref|NM_001036897.1| Arabidopsis thaliana catalytic AT5G36880 transcript variant AT5G36880.2 mRNA, complete cds Length = 2570 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 449 attctccgcatgatcttaccgctccgtgtctttgggagccctggtgcccaatggatcttg 508 ||||||| ||| ||||| ||||| | |||||||| | ||||||||||||||| || || Sbjct: 2119 attctcctcattatctttccgcttctcgtctttggcaaccctggtgcccaatgtattctg 2060 Query: 509 tcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| || |||||||| Sbjct: 2059 tccggtgctgcaaaagccccaatctg 2034
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaac 83 ||||||||||||||||||||| |||||||||||| Sbjct: 88536 tccctccgtaaactaatataagagcatttagaac 88569
>gb|AY045880.1| Arabidopsis thaliana putative acetyl-CoA synthetase (At5g36880) mRNA, complete cds Length = 2454 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 449 attctccgcatgatcttaccgctccgtgtctttgggagccctggtgcccaatggatcttg 508 ||||||| ||| ||||| ||||| | |||||||| | ||||||||||||||| || || Sbjct: 2157 attctcctcattatctttccgcttctcgtctttggcaaccctggtgcccaatgtattctg 2098 Query: 509 tcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| || |||||||| Sbjct: 2097 tccggtgctgcaaaagccccaatctg 2072
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 60.0 bits (30), Expect = 8e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| |||||||||||||| |||||||| | || || |||| |||| |||||| Sbjct: 695 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 754 Query: 107 cttatatt-agtttatagagggagta 131 |||||||| |||||| ||||||||| Sbjct: 755 cttatattaagtttacggagggagta 780 Score = 52.0 bits (26), Expect = 0.002 Identities = 72/86 (83%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 47 tactccctccgtaaact-aatataaaagcatttagaacactactttagtaatctgaacac 105 ||||||||||||||||| ||||||| || |||||| ||||| |||| | || | || | Sbjct: 780 tactccctccgtaaacttaatataagagtgtttagatcactattttaatgatttaaatgc 721 Query: 106 tcttatattagtttatagagggagta 131 ||||||||||||||| ||||||||| Sbjct: 720 tcttatattagtttaccgagggagta 695
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 57 gtaaactaatataaaagcatttagaacactactttagtaatctgaacactcttatatt 114 |||||| ||||||| ||| |||||| |||||||||||| |||| ||||||||||||| Sbjct: 4299 gtaaacaaatataagagcgtttagatcactactttagtgatctagacactcttatatt 4356
>gb|BT002371.1| Arabidopsis thaliana clone U10380 putative acetyl-CoA synthetase (At5g36880) mRNA, complete cds Length = 2113 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 449 attctccgcatgatcttaccgctccgtgtctttgggagccctggtgcccaatggatcttg 508 ||||||| ||| ||||| ||||| | |||||||| | ||||||||||||||| || || Sbjct: 1979 attctcctcattatctttccgcttctcgtctttggcaaccctggtgcccaatgtattctg 1920 Query: 509 tcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| || |||||||| Sbjct: 1919 tccggtgctgcaaaagccccaatctg 1894
>gb|AF036618.1|AF036618 Arabidopsis thaliana acetyl-CoA synthetase mRNA, complete cds Length = 2382 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 449 attctccgcatgatcttaccgctccgtgtctttgggagccctggtgcccaatggatcttg 508 ||||||| ||| ||||| ||||| | |||||||| | ||||||||||||||| || || Sbjct: 2022 attctcctcattatctttccgcttctcgtctttggcaaccctggtgcccaatgtattctg 1963 Query: 509 tcaggtgctgcaaacgcgccaatctg 534 || ||||||||||| || |||||||| Sbjct: 1962 tccggtgctgcaaaagccccaatctg 1937
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 42 atacgtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctga 101 |||| ||||||||||||||| |||||| ||| |||||| ||| | |||| |||| | Sbjct: 11667 atacatactccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaa 11726 Query: 102 acactcttatattagtttatagagggagtact 133 | ||||||||||| ||||||||||||||||| Sbjct: 11727 atactcttatatttctttatagagggagtact 11758
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 42 atacgtactccctccgtaaactaatataaaagcatttagaacactactttagtaatctga 101 |||| ||||||||||||||| |||||| ||| |||||| ||| | |||| |||| | Sbjct: 14385 atacatactccctccgtaaagaaatatatgagcgtttagatcaccaaagtagtgatctaa 14444 Query: 102 acactcttatattagtttatagagggagtact 133 | ||||||||||| ||||||||||||||||| Sbjct: 14445 atactcttatatttctttatagagggagtact 14476
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacact 106 ||||||||| ||||| ||||||| | |||||||| ||||||||||| |||| |||| | Sbjct: 2259 tactccctctgtaaagaaatataagatcatttagataactactttagtgatctaaacatt 2318 Query: 107 cttatatt 114 |||||||| Sbjct: 2319 cttatatt 2326
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||||||||| ||||||| ||| ||||| |||||||| ||| ||| |||| ||||| Sbjct: 7045 tccctccgtaaagaaatataagagcgtttaggtcactacttcagtgatccgaacgctctt 7104 Query: 110 atattagttta 120 ||||| ||||| Sbjct: 7105 atatttgttta 7115
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||||||||| ||||||| ||| ||||| |||||||| ||| ||| |||| ||||| Sbjct: 6506 tccctccgtaaagaaatataagagcgtttaggtcactacttcagtgatccgaacgctctt 6565 Query: 110 atattagttta 120 ||||| ||||| Sbjct: 6566 atatttgttta 6576
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||||||||| ||||||| ||| ||||| |||||||| ||| ||| |||| ||||| Sbjct: 7028 tccctccgtaaagaaatataagagcgtttaggtcactacttcagtgatccgaacgctctt 7087 Query: 110 atattagttta 120 ||||| ||||| Sbjct: 7088 atatttgttta 7098
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 50 tccctccgtaaactaatataaaagcatttagaacactactttagtaatctgaacactctt 109 |||||||||||| ||||||| ||| ||||| |||||||| ||| ||| |||| ||||| Sbjct: 73578 tccctccgtaaagaaatataagagcgtttaggtcactacttcagtgatccgaacgctctt 73637 Query: 110 atattagttta 120 ||||| ||||| Sbjct: 73638 atatttgttta 73648
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataaaagcattta 79 ||||| ||||||||||||||||||| |||||||| Sbjct: 73049 gtacttcctccgtaaactaatataagagcattta 73082
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 433 ggcaattttccgcaatattctccgcatgatcttaccgctccgtgtctt 480 |||||| || ||||| || | |||||||||||| |||||||||||||| Sbjct: 1909825 ggcaatcttgcgcaaaatccgccgcatgatcttgccgctccgtgtctt 1909778
>emb|AL157378.8| Human DNA sequence from clone RP3-463P15 on chromosome 6 Contains part of a novel gene, complete sequence Length = 92985 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 taaactaatataaaagcatttag 80 ||||||||||||||||||||||| Sbjct: 79618 taaactaatataaaagcatttag 79640
>gb|AC006265.1|AC006265 Homo sapiens chromosome 17, clone hRPK.566_B_16, complete sequence Length = 177707 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 taaactaatataaaagcatttag 80 ||||||||||||||||||||||| Sbjct: 140740 taaactaatataaaagcatttag 140762
>gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate synthase 4 mRNA, partial cds Length = 2642 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagta 131 ||||||||||||||| |||||||||| Sbjct: 1422 tcttatattagtttacagagggagta 1447 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 47 tactccctccgtaaactaatataaaagcatttag 80 ||||||||| |||||||||||||| | ||||||| Sbjct: 1447 tactccctctgtaaactaatataagatcatttag 1414
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 cagaggcaagaaagaaaatga 297 ||||||||||||||||||||| Sbjct: 704997 cagaggcaagaaagaaaatga 705017
>ref|XM_360658.1| Magnaporthe grisea 70-15 hypothetical protein (MG03201.4) partial mRNA Length = 1908 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 attctccgcatgatcttaccgctcc 473 |||||||||||||||||||| |||| Sbjct: 1793 attctccgcatgatcttaccactcc 1769
>gb|AC087160.2| Sus scrofa clone RP44-418J7, complete sequence Length = 166651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 cagaggcaagaaagaaaatga 297 ||||||||||||||||||||| Sbjct: 27237 cagaggcaagaaagaaaatga 27257
>emb|CR626926.1| Aegilops tauschii Length = 94421 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 47 tactccctccgtaaactaatataaaagcatttagaacacta 87 |||||||| ||||| |||||||||||| |||||| ||||| Sbjct: 85541 tactccctatgtaaaataatataaaagcgtttagatcacta 85581
>gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence Length = 159419 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 catacatctgatttatatata 44 ||||||||||||||||||||| Sbjct: 127362 catacatctgatttatatata 127342
>gb|AC120367.8| Mus musculus chromosome 7, clone RP24-325B21, complete sequence Length = 224814 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 catacatctgatttatatata 44 ||||||||||||||||||||| Sbjct: 120598 catacatctgatttatatata 120618
>gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156054 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 actatttttctgtgctgtgat 151 ||||||||||||||||||||| Sbjct: 147153 actatttttctgtgctgtgat 147173
>gb|AF130044.1|AF130044 Homo sapiens clone FLB1825 PRO0419 mRNA, complete cds Length = 2204 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 actatttttctgtgctgtgat 151 ||||||||||||||||||||| Sbjct: 1921 actatttttctgtgctgtgat 1941
>emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in linkage group 10, complete sequence Length = 199662 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 catacatctgatttatatata 44 ||||||||||||||||||||| Sbjct: 168719 catacatctgatttatatata 168739
>emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 gtactccctccgtaaactaatataa 70 ||||| ||||||||||||||||||| Sbjct: 603 gtacttcctccgtaaactaatataa 627 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 101 aacactcttatattagtttatagagggagtact 133 |||||||||||||||||||| |||| |||||| Sbjct: 634 aacactcttatattagtttacggaggaagtact 602
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ggcaattttccgcaatattctccg 456 |||||||| ||||||||||||||| Sbjct: 835444 ggcaatttcccgcaatattctccg 835421
>gb|AC159427.1| Trypanosoma brucei chromosome 8 clone RPCI93-27P2, complete sequence Length = 146393 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 26940 aggcaagaaagaaaatgaga 26921
>gb|BT015236.1| Drosophila melanogaster RE06088 full insert cDNA Length = 4376 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 atctgatttatatatacgta 48 |||||||||||||||||||| Sbjct: 3139 atctgatttatatatacgta 3120
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 atctgatttatatatacgta 48 |||||||||||||||||||| Sbjct: 8168 atctgatttatatatacgta 8187
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 tagtaatctgaacactcttatattagtt 118 ||||||||| ||| |||||||||||||| Sbjct: 1965 tagtaatctaaacgctcttatattagtt 1992
>gb|AC115843.10| Mus musculus chromosome 9, clone RP24-239P6, complete sequence Length = 215265 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tgcagctaatacatacttgc 24 |||||||||||||||||||| Sbjct: 71291 tgcagctaatacatacttgc 71310
>gb|AC124012.4| Mus musculus BAC clone RP24-357P22 from chromosome 18, complete sequence Length = 193064 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atatacatctcacttgactt 183 |||||||||||||||||||| Sbjct: 86825 atatacatctcacttgactt 86844
>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence Length = 161147 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 atctgatttatatatacgta 48 |||||||||||||||||||| Sbjct: 110074 atctgatttatatatacgta 110093
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 84 actactttagtaatctgaacactcttatattagtttatagagggagta 131 |||||| |||| |||| ||| ||||||||||| |||| | |||||||| Sbjct: 47993 actactctagtgatctaaacgctcttatattattttacatagggagta 47946
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ggatcagcaagtgtgctcgt 405 |||||||||||||||||||| Sbjct: 174597 ggatcagcaagtgtgctcgt 174578
>gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome 19, complete sequence Length = 203282 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatttatcaccagaggcaag 286 |||||||||||||||||||| Sbjct: 43917 tatttatcaccagaggcaag 43936
>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence Length = 140639 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 267 tatttatcaccagaggcaagaaagaaaa 294 |||||||||| ||||| ||||||||||| Sbjct: 94080 tatttatcactagagggaagaaagaaaa 94107
>emb|AL669876.7| Human DNA sequence from clone RP11-190L2 on chromosome X, complete sequence Length = 90143 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gacatataaactgattctct 265 |||||||||||||||||||| Sbjct: 53068 gacatataaactgattctct 53049
>emb|AL008628.1|HS140C12 Human DNA sequence from clone RP1-140C12 on chromosome 6q26-27 ContaiContains the 3' end of the gene for KIAA1838 and 2 CpG islands, complete sequence Length = 143096 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aagcatttagaacactactt 90 |||||||||||||||||||| Sbjct: 98447 aagcatttagaacactactt 98466
>gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA sequence Length = 1768 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 tcttatattagtttatagagggagtact 133 |||||||||||| || |||||||||||| Sbjct: 412 tcttatattagtctacagagggagtact 439
>dbj|BS000622.1| Pan troglodytes chromosome Y clone:PTBY-001M14, complete sequences Length = 43756 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 13450 aggcaagaaagaaaatgaga 13469
>gb|AF458265.1| Triticum aestivum isolate Can3842 rga2 protein (rga2) gene, partial cds Length = 1392 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 tcttatattagtttatagagggagtact 133 ||||||||||||||| ||||||| |||| Sbjct: 217 tcttatattagtttacagagggaatact 190
>gb|AC027761.6| Homo sapiens chromosome 8, clone RP11-655E7, complete sequence Length = 175657 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 23813 aggcaagaaagaaaatgaga 23794
>ref|NM_001014759.1| Drosophila melanogaster Dopamine 2-like receptor CG33517-RB, transcript variant B (D2R), mRNA Length = 4357 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 atctgatttatatatacgta 48 |||||||||||||||||||| Sbjct: 3139 atctgatttatatatacgta 3120
>gb|AC149130.2| Medicago truncatula chromosome 2 BAC clone mth2-193n2, complete sequence Length = 132313 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aaactaatataaaagcattt 78 |||||||||||||||||||| Sbjct: 130774 aaactaatataaaagcattt 130793
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 454 ccgcatgatcttaccgctccgtgtctttgggagccc 489 |||||||||||| ||||| || ||||| |||||||| Sbjct: 3075386 ccgcatgatcttgccgctacgcgtcttggggagccc 3075421
>gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome 18, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atatacatctcacttgactt 183 |||||||||||||||||||| Sbjct: 197180 atatacatctcacttgactt 197199
>gb|AC007481.6|AC007481 Homo sapiens chromosome 8, clone RP11-50A1, complete sequence Length = 137032 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 51071 aggcaagaaagaaaatgaga 51090
>gb|AF277252.1|AF277252 Australopyrum pectinatum isolate H6771 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1048 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 96 atctgaacactcttatattagtttatagagggagta 131 |||| ||| |||||||||| ||||||||||||||| Sbjct: 839 atctaaacgctcttatatttctttatagagggagta 804
>gb|AF277251.1|AF277251 Australopyrum retrofractum isolate H6723 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1061 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 96 atctgaacactcttatattagtttatagagggagta 131 |||| ||| |||||||||| ||||||||||||||| Sbjct: 839 atctaaacgctcttatatttctttatagagggagta 804
>emb|BX323828.7| Zebrafish DNA sequence from clone DKEY-102M7 in linkage group 14, complete sequence Length = 206011 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 tctctctatttatcaccaga 280 |||||||||||||||||||| Sbjct: 159477 tctctctatttatcaccaga 159496
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tatatatacgtactccctcc 56 |||||||||||||||||||| Sbjct: 11475678 tatatatacgtactccctcc 11475659
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gagggagtactatttttctg 142 |||||||||||||||||||| Sbjct: 17519681 gagggagtactatttttctg 17519700
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09, complete sequence Length = 127117 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 agagggagtactatttttct 141 |||||||||||||||||||| Sbjct: 116945 agagggagtactatttttct 116964
>gb|AF091736.1|AF091736 VESV-like calicivirus strain Pan-1, complete genome Length = 8304 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccaaccccatggtactaaat 219 |||||||||||||||||||| Sbjct: 1980 ccaaccccatggtactaaat 1999
>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14 map q28, complete sequence Length = 185708 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 127244 aggcaagaaagaaaatgaga 127263
>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence Length = 148527 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 141831 aggcaagaaagaaaatgaga 141850
>gb|AC159142.2| Medicago truncatula chromosome 2 BAC clone mth2-145o9, complete sequence Length = 107765 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 aaactaatataaaagcattt 78 |||||||||||||||||||| Sbjct: 75546 aaactaatataaaagcattt 75527
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tatatatacgtactccctcc 56 |||||||||||||||||||| Sbjct: 109366 tatatatacgtactccctcc 109347
>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045A07 Length = 174165 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gagggagtactatttttctg 142 |||||||||||||||||||| Sbjct: 47630 gagggagtactatttttctg 47649
>gb|AC130536.4| Mus musculus BAC clone RP23-369M17 from 13, complete sequence Length = 188021 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ggatcagcaagtgtgctcgt 405 |||||||||||||||||||| Sbjct: 134736 ggatcagcaagtgtgctcgt 134755
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 agagggagtactatttttct 141 |||||||||||||||||||| Sbjct: 35274 agagggagtactatttttct 35293
>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete sequence Length = 297848 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 atctgatttatatatacgta 48 |||||||||||||||||||| Sbjct: 99030 atctgatttatatatacgta 99049
>emb|CR936402.11| Zebrafish DNA sequence from clone CH211-276P20 in linkage group 3, complete sequence Length = 92277 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 atggtactaaataaatcaag 227 |||||||||||||||||||| Sbjct: 90273 atggtactaaataaatcaag 90254
>emb|AL645816.1| Human DNA sequence from clone RP13-209P2 on chromosome Xq21.31-22.1, complete sequence Length = 42108 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gacatataaactgattctct 265 |||||||||||||||||||| Sbjct: 35180 gacatataaactgattctct 35199
>dbj|AP002905.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1672E10 Length = 158401 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcaagaaagaaaatgaga 299 |||||||||||||||||||| Sbjct: 55290 aggcaagaaagaaaatgaga 55309 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,610,642 Number of Sequences: 3902068 Number of extensions: 5610642 Number of successful extensions: 105753 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105047 Number of HSP's gapped (non-prelim): 673 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)