Clone Name | rbah62o06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY376457.1| Meriones unguiculatus follicle stimulating hormone beta subunit (FSH-beta) mRNA, complete cds Length = 1640 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atggacagacaaaagagaag 173 |||||||||||||||||||| Sbjct: 1472 atggacagacaaaagagaag 1453
>gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC F17A9 genomic sequence, complete sequence Length = 90142 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 aaaaatggacagacaaaagagaag 173 ||||||||||||||| |||||||| Sbjct: 61121 aaaaatggacagacagaagagaag 61098
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 40.1 bits (20), Expect = 2.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 tgcccatacatacattgntacat 59 ||||||||||||||||| ||||| Sbjct: 106400 tgcccatacatacattgctacat 106422
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 tgcccatacatacattgntacat 59 ||||||||||||||||| ||||| Sbjct: 9873921 tgcccatacatacattgctacat 9873943
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 tgcccatacatacattgntacat 59 ||||||||||||||||| ||||| Sbjct: 9879960 tgcccatacatacattgctacat 9879982
>gb|AC083964.3| Homo sapiens chromosome 8, clone RP11-91J19, complete sequence Length = 161160 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 147310 aaacaaaaatggacagaca 147328
>emb|AL954249.1| Pan troglodytes chromosome 22 clone PTB-105M10 map 22q22.3, complete sequence Length = 182974 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 12703 aaacaaaaatggacagaca 12721
>emb|AL954248.1| Pan troglodytes chromosome 22 clone PTB-061A04 map 22q22.3, complete sequence Length = 162730 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 157817 aaacaaaaatggacagaca 157835
>emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in linkage group 14, complete sequence Length = 168546 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 aatggacagacaaaagaga 171 ||||||||||||||||||| Sbjct: 105060 aatggacagacaaaagaga 105078
>dbj|AP006273.1| Papio hamadryas genomic DNA, BAC clone: RPCI41-30J10, chromosome 3, complete sequence Length = 183435 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 39194 aaacaaaaatggacagaca 39212
>dbj|AP006271.1| Pan troglodytes genomic DNA, BAC clone: RPCI43-155P15, chromosome 22, complete sequence Length = 129950 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 58052 aaacaaaaatggacagaca 58070
>dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, section 98/105 Length = 340000 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 260558 aaacaaaaatggacagaca 260576
>emb|AL672101.22| Mouse DNA sequence from clone RP23-170E12 on chromosome X, complete sequence Length = 159735 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 139914 aaacaaaaatggacagaca 139896
>gb|AC090135.13| Homo sapiens chromosome 8, clone RP11-18D5, complete sequence Length = 103709 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 33422 aaacaaaaatggacagaca 33404
>dbj|AP001067.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1399C7, MX1-D21S171 region, complete sequence Length = 148845 Score = 38.2 bits (19), Expect = 8.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 aaacaaaaatggacagaca 164 ||||||||||||||||||| Sbjct: 30390 aaacaaaaatggacagaca 30408 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,214,983 Number of Sequences: 3902068 Number of extensions: 1214983 Number of successful extensions: 57061 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57018 Number of HSP's gapped (non-prelim): 43 length of query: 174 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 152 effective length of database: 17,147,199,772 effective search space: 2606374365344 effective search space used: 2606374365344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)