ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah63d03 |
|---|---|
| Clone Library Name | barley_pub |
>XPP1_RAT (O54975) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 116 bits (291), Expect = 4e-26 Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 4/108 (3%) Frame = -2 Query: 566 PLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLI 387 PL+A M VTDEPGYYEDG FGIR+ENV++V A TK+NF +G L+FE +T P QTK+I Sbjct: 513 PLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMI 572 Query: 386 NTALLTPAEIEWVNVYHSDCQKILESYLNVQEK----EWLRKATEPIT 255 + LT E +W+N YH C+ ++ L Q + EWL + TEPI+ Sbjct: 573 DVDALTDKECDWLNSYHQTCRDVIGKELQTQGRQEALEWLLRETEPIS 620
>XPP1_MOUSE (Q6P1B1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 623 Score = 114 bits (286), Expect = 2e-25 Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 4/108 (3%) Frame = -2 Query: 566 PLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLI 387 PL+A M VTDEPGYYEDG FGIR+ENV++V A TK+NF +G L+FE +T P QTK+I Sbjct: 513 PLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMI 572 Query: 386 NTALLTPAEIEWVNVYHSDCQKILESYLNVQEK----EWLRKATEPIT 255 + LT E +W+N YH C+ ++ L Q + EWL + TEP++ Sbjct: 573 DVNALTDKECDWLNSYHQTCRDVVGKELQSQGRQEALEWLIRETEPVS 620
>XPP1_HUMAN (Q9NQW7) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (X-Pro| aminopeptidase 1) (X-prolyl aminopeptidase 1, soluble) (Cytosolic aminopeptidase P) (Soluble aminopeptidase P) (sAmp) (Aminoacylproline aminopeptidase) Length = 622 Score = 111 bits (277), Expect = 2e-24 Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 4/108 (3%) Frame = -2 Query: 566 PLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTKLI 387 PL+A M VTDEPGYYEDG FGIR+ENV++V TK+NF +G L+FE +T P QTK+I Sbjct: 512 PLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMI 571 Query: 386 NTALLTPAEIEWVNVYHSDCQKILESYLNVQEK----EWLRKATEPIT 255 + LT E +W+N YH C+ ++ L Q + EWL + T+PI+ Sbjct: 572 DVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQPIS 619
>YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-)| Length = 598 Score = 102 bits (254), Expect = 8e-22 Identities = 48/113 (42%), Positives = 72/113 (63%) Frame = -2 Query: 596 ISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHI 417 I R + PLQA M ++EPG+YEDG+FG R+EN + + E +T+ F + YL + + Sbjct: 486 IGSREVFNSAPLQAGMVTSNEPGFYEDGHFGYRVENCVYITEVNTENRFAGRTYLGLKDL 545 Query: 416 TWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQEKEWLRKATEPI 258 T AP+ KLI+ +LL+P E++++N YHS+ L L+V K+WL K T PI Sbjct: 546 TLAPHCQKLIDPSLLSPEEVKYLNEYHSEVYTTLSPMLSVSAKKWLSKHTSPI 598
>XPP_YEAST (Q07825) Putative Xaa-Pro aminopeptidase (EC 3.4.11.9)| Length = 749 Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 2/115 (1%) Frame = -2 Query: 596 ISFRPSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHI 417 + FRP N PL+A +++EPGYY+DG +GIR+E+ +++K+A K NF L FE++ Sbjct: 640 VGFRPHLMNFPLRAGNIISNEPGYYKDGEYGIRIESDMLIKKATEKGNF-----LKFENM 694 Query: 416 TWAPYQTKLINTALLTPAEIEWVNVYHSDCQKILESYLNVQ--EKEWLRKATEPI 258 T PY KLINT LL E +N YH+ + + +L Q +WL++ T P+ Sbjct: 695 TVVPYCRKLINTKLLNEEEKTQINEYHARVWRTIVHFLQPQSISYKWLKRETSPL 749
>XPP2_PIG (Q95333) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 673 Score = 87.8 bits (216), Expect = 2e-17 Identities = 44/111 (39%), Positives = 72/111 (64%), Gaps = 4/111 (3%) Frame = -2 Query: 572 NVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQTK 393 N+P+ M + EPGYY+DG FGIRLE+V +V EA TK+ YL+FE ++ PY K Sbjct: 542 NIPMAEGMFTSIEPGYYQDGEFGIRLEDVALVVEAKTKY---PGTYLTFEVVSLVPYDRK 598 Query: 392 LINTALLTPAEIEWVNVYHSDCQKILESYLN----VQEKEWLRKATEPITA 252 LI+ +LL+P +++++N Y+ ++ + L ++E WL++ TEP++A Sbjct: 599 LIDVSLLSPEQLQYLNRYYQAIREKVGPELQRRGLLEELSWLQRHTEPLSA 649
>XPP2_HUMAN (O43895) Xaa-Pro aminopeptidase 2 precursor (EC 3.4.11.9) (X-Pro| aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) Length = 674 Score = 85.1 bits (209), Expect = 1e-16 Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 4/113 (3%) Frame = -2 Query: 578 ARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKEADTKFNFGEKGYLSFEHITWAPYQ 399 + N+ + M + EPGYY+DG FGIRLE+V +V EA TK+ YL+FE +++ PY Sbjct: 541 SNNIAMAKGMFTSIEPGYYKDGEFGIRLEDVALVVEAKTKY---PGSYLTFEVVSFVPYD 597 Query: 398 TKLINTALLTPAEIEWVNVYHSDCQKILESYLN----VQEKEWLRKATEPITA 252 LI+ +LL+P ++++N Y+ ++ + L ++E EWL++ TEP+ A Sbjct: 598 RNLIDVSLLSPEHLQYLNRYYQTIREKVGPELQRRQLLEEFEWLQQHTEPLAA 650
>Y806_METJA (Q58216) Hypothetical peptidase MJ0806 (EC 3.4.-.-)| Length = 347 Score = 33.5 bits (75), Expect = 0.48 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = -2 Query: 572 NVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 471 ++ L+ M VT EPG Y FG+R+E++ +VK+ Sbjct: 300 DIILKEGMVVTIEPGLYLKDKFGVRIEDLYLVKK 333
>TRI56_MOUSE (Q80VI1) Tripartite motif protein 56| Length = 734 Score = 33.1 bits (74), Expect = 0.62 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -1 Query: 393 TYKHRLVDPCGDRMGKRVPLRLPENLGVLPKCSGEGMAEEGH*TYNCEQLSQLLHGYCCC 214 T+KHR+VD G R G P+ GE + + C+ SQLL C Sbjct: 141 THKHRVVDLVGYRAGWYDEEARERQASQCPQHPGEALC------FLCQPCSQLLCKDCRL 194 Query: 213 APNIDR-CLP 187 P+ID CLP Sbjct: 195 GPHIDHPCLP 204
>YPDF_ECOLI (P76524) Aminopeptidase ypdF (EC 3.4.11.-)| Length = 361 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -2 Query: 563 LQASMTVTDEPGYYEDGNFGIRLENVLIV 477 LQ M +T EPG Y G G+R+E+V++V Sbjct: 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340
>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin| coat-associated protein AP180) (91 kDa synaptosomal-associated protein) Length = 915 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +2 Query: 275 SSAIPSPEHLGKTPRFSGSRSGTRLPIRSPQG 370 SSA PS + L P FSG+R+G P+ P G Sbjct: 341 SSAKPSSDLLDLQPDFSGARAGAAAPVPPPTG 372
>YOD1_SCHPO (Q9UUD8) Probable peptidase C18A7.01 (EC 3.4.-.-)| Length = 451 Score = 30.0 bits (66), Expect = 5.3 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = -2 Query: 584 PSARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 471 P+ + P+Q T EPG Y GIR+E+ ++ + Sbjct: 398 PANKGTPVQKGNVFTVEPGIYIPDEIGIRIEDAVLASD 435
>PEPE_MYCTU (P65810) Probable dipeptidase pepE (EC 3.4.13.-)| Length = 375 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 581 SARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 471 + ++ L M + EPG Y G +G R+E+++IV E Sbjct: 320 AGNDLVLVPGMAFSIEPGIYFPGRWGARIEDIVIVTE 356
>PEPE_MYCBO (P65811) Probable dipeptidase pepE (EC 3.4.13.-)| Length = 375 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 581 SARNVPLQASMTVTDEPGYYEDGNFGIRLENVLIVKE 471 + ++ L M + EPG Y G +G R+E+++IV E Sbjct: 320 AGNDLVLVPGMAFSIEPGIYFPGRWGARIEDIVIVTE 356 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,473,093 Number of Sequences: 219361 Number of extensions: 1797306 Number of successful extensions: 3872 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3749 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3862 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
