Clone Name | rbah63c18 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYF1_CRYNE (Q5KH46) Pre-mRNA-splicing factor SYF1 | 28 | 8.9 |
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>SYF1_CRYNE (Q5KH46) Pre-mRNA-splicing factor SYF1| Length = 1031 Score = 27.7 bits (60), Expect = 8.9 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 42 LKLPTPIVHPQFFPSNCDVVTLSEAIQNP 128 L +PTPI HP PS D+ + + NP Sbjct: 18 LPIPTPITHPHLIPS-ADLPVEEDLLHNP 45 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,164,066 Number of Sequences: 219361 Number of extensions: 307465 Number of successful extensions: 773 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 773 length of database: 80,573,946 effective HSP length: 32 effective length of database: 73,554,394 effective search space used: 1765305456 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)