Clone Name | rbah63c17 |
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Clone Library Name | barley_pub |
>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) Length = 663 Score = 120 bits (302), Expect = 3e-27 Identities = 63/127 (49%), Positives = 78/127 (61%) Frame = -3 Query: 668 SSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXXXPQVSEIHATITCKNKGFYLT 489 + ++AL+ + L RDE +IG PQVSE+HA I+ K F++T Sbjct: 537 AGNSNAALETLVLSRDENMPCNIGSVSHANIPGKSVVIPLPQVSEMHARISYKGGAFFVT 596 Query: 488 DLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVLSALPYDSARGG 309 DL SEHGTW DNEGRRYR PNFP RFHPSD IEFGSDKKA FRVKV+ P +A+ Sbjct: 597 DLRSEHGTWITDNEGRRYRASPNFPTRFHPSDIIEFGSDKKAAFRVKVMKFPPKTAAKEE 656 Query: 308 GEVLQAA 288 + + AA Sbjct: 657 RQAVGAA 663
>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) Length = 669 Score = 112 bits (281), Expect = 8e-25 Identities = 60/111 (54%), Positives = 70/111 (63%) Frame = -3 Query: 674 PMSSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXXXPQVSEIHATITCKNKGFY 495 P +G S L+ I L RDE ++G PQVSE+HA I+CK+ F+ Sbjct: 542 PAGNGS-SGLEAIVLSRDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFF 600 Query: 494 LTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVL 342 +TDL SEHGTW DNEGRRYR PNFP RFHPSD IEFGSD KA FRVK + Sbjct: 601 VTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSD-KAAFRVKAM 650
>ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) (PA-ZE) Length = 661 Score = 111 bits (277), Expect = 2e-24 Identities = 65/124 (52%), Positives = 76/124 (61%) Frame = -3 Query: 659 DDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXXXPQVSEIHATITCKNKGFYLTDLG 480 D+ A Q I L RDE+ IG PQVSE+HA I+ K+ FYLTDL Sbjct: 541 DNDASQLICLNRDEKNPCIIGSAPHGDVSGISIAIPKPQVSEMHARISYKDGAFYLTDLR 600 Query: 479 SEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVLSALPYDSARGGGEV 300 SEHGTW D EG+RYR+PPNFP RF PSDAIE GS K A FRVKV+ + P + G + Sbjct: 601 SEHGTWIADIEGKRYRVPPNFPARFRPSDAIEIGSQKVA-FRVKVMKSSPGSVEKEG--I 657 Query: 299 LQAA 288 LQAA Sbjct: 658 LQAA 661
>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC| 1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl epoxidase) Length = 660 Score = 99.0 bits (245), Expect = 1e-20 Identities = 53/127 (41%), Positives = 71/127 (55%) Frame = -3 Query: 668 SSGDDSALQPIRLIRDEQRTLSIGXXXXXXXXXXXXXXXXPQVSEIHATITCKNKGFYLT 489 + ++AL+ + L RDE +IG QVS++HA I+ F T Sbjct: 535 AGNSNAALETLVLSRDENMPCTIGSVSHANIPGKSVVIPLSQVSDMHARISYNGGAFLGT 594 Query: 488 DLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAMFRVKVLSALPYDSARGG 309 S+HGTWF DNEGRRYR+ PNFP+RFH SD I FGSD KA FR+K + P +A+ Sbjct: 595 AFRSDHGTWFIDNEGRRYRVSPNFPMRFHSSDVIVFGSD-KAAFRIKAMKFAPKTAAKED 653 Query: 308 GEVLQAA 288 + + AA Sbjct: 654 RQAVGAA 660
>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)| (Solute carrier family 4 anion exchanger member 1 adapter protein) (Lung cancer oncogene 3 protein) Length = 796 Score = 39.3 bits (90), Expect = 0.011 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -3 Query: 503 GFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 366 GFYL DLGS HGT+ N + R+PP R H + FG + Sbjct: 230 GFYLYDLGSTHGTFLN-----KTRIPPRTYCRVHVGHVVRFGGSTR 270
>FRAH_ANASP (P46017) Protein fraH| Length = 289 Score = 37.4 bits (85), Expect = 0.042 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -3 Query: 542 VSEIHATITCKNKGFYLTDLGSEHGTWFND---NEGRRYRLPPNFPVRFHPSDAIEF 381 VS +HA I + Y+ D+GS +GT+ N+ G R+RL P + D + F Sbjct: 228 VSRVHADIRLEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 284
>DMA1_SCHPO (Q10322) Protein dma1| Length = 267 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = -3 Query: 542 VSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPP----NFPVRFHPSDAIEFGS 375 VS HA I +N +Y+ D+GS GT+ N RL P + P +D ++ G+ Sbjct: 84 VSRRHAQIFYENNTWYIQDMGSSSGTFLN-----HVRLSPPSKTSKPYPISNNDILQLGA 138 Query: 374 D 372 D Sbjct: 139 D 139
>PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA| synthetase) Length = 628 Score = 30.0 bits (66), Expect = 6.7 Identities = 21/59 (35%), Positives = 27/59 (45%) Frame = +2 Query: 260 DKGWLKSPLMLPAELLPRLSPSRMGAR*APSPGTWPSCLNQTRWHPKGENEPGSLEVTG 436 + GW P+M A L PSR+G+ P G LN+ P G NE G L + G Sbjct: 390 ESGW---PIMALARALDD-RPSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEG 444
>RAD17_MOUSE (Q6NXW6) Cell cycle checkpoint protein RAD17| Length = 688 Score = 29.6 bits (65), Expect = 8.8 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -3 Query: 281 GTSATPCHQPLYSILQ*KNSRHCITAKKRNCNFC 180 G+S P H+P + ++Q K +C+ AK +FC Sbjct: 516 GSSFRPLHKPQWFLIQKKYRENCLAAKALFVDFC 549 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,431,862 Number of Sequences: 219361 Number of extensions: 2113261 Number of successful extensions: 5028 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5027 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)