Clone Name | rbah62n16 |
---|---|
Clone Library Name | barley_pub |
>UTR4_YEAST (P32626) Protein UTR4 (Unknown transcript 4 protein)| Length = 241 Score = 63.9 bits (154), Expect = 4e-10 Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 8/103 (7%) Frame = -2 Query: 518 EAQRLXFG-----NTAAHG--DLRPYLSAFFDTNVGGKKL-SRSYYEIWQTLGVDSPSQI 363 +AQ+L FG N AH DL Y+ +FD N GKK ++SY I + +G + S++ Sbjct: 137 KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKA-SEV 195 Query: 362 LFLTDVYQEATAARDAGLEVLISIRPGNAPLPEDHGFQTITSF 234 LFL+D E AA G+ ++ RPGNAP+P+ +Q +F Sbjct: 196 LFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNF 238
>G6PD_PICJA (P11410) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)| Length = 495 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 235 NDVMVWKP*SSGSGAFPGLIDISTSRPASLAAV-ASW*TSVRKSIWDGL 378 NDV++ + S G PG +D ST +P S A A++ ++ WDG+ Sbjct: 279 NDVLLGQYGKSEDGTKPGYLDDSTVKPNSKAVTYAAFRVNIHNERWDGV 327
>ILVC_DESDG (Q30ZD3) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 329 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = -2 Query: 344 YQEATAARDAGLEVLISIRPG--NAPLPEDHGFQTITS 237 + A RD+G+ V++ RPG N L ++HGFQ +++ Sbjct: 29 HAHAQNLRDSGVNVIVGQRPGGPNFELAKEHGFQPLSA 66
>ILVC_DESVH (Q72CA6) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 331 Score = 30.4 bits (67), Expect = 4.3 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = -2 Query: 344 YQEATAARDAGLEVLISIRPG--NAPLPEDHGFQTITS 237 + A RD+G+ V++ RPG N L ++HGF+ +++ Sbjct: 29 HAHAQNLRDSGISVIVGQRPGGANYALAKEHGFEPVSA 66
>PGKC_RALEU (P50319) Phosphoglycerate kinase, chromosomal (EC 2.7.2.3)| Length = 413 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 436 LEARNCLXVTTRSGRPSASTARPRYSSSPMSTKKPPLQGMQV 311 L+A + VT+ GRP PR+S +P+ + L G QV Sbjct: 68 LQAGAAVMVTSHLGRPQEGAPDPRHSLAPVGRRLSELLGRQV 109
>PGKP_RALEU (P50320) Phosphoglycerate kinase, plasmid (EC 2.7.2.3)| Length = 412 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 436 LEARNCLXVTTRSGRPSASTARPRYSSSPMSTKKPPLQGMQV 311 L+A + VT+ GRP PR+S +P+ + L G QV Sbjct: 67 LQAGAAVMVTSHLGRPQEGAPDPRHSLAPVGRRLSELLGRQV 108
>ILVC_RHOBA (Q7UKY0) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 334 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -2 Query: 344 YQEATAARDAGLEVLISIRPGNA--PLPEDHGFQTIT 240 + +A RD+G EV+I RPG+A L HGF+ ++ Sbjct: 31 HAQAQNLRDSGCEVIIGQRPGSANYDLAVSHGFEPMS 67 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,694,237 Number of Sequences: 219361 Number of extensions: 1393932 Number of successful extensions: 4371 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4257 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4369 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)