ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62n16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
2dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
3dbj|AK119457.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
4dbj|AK104517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
5dbj|AK104752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6dbj|AK104625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
7dbj|AK067866.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
8dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
9dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 4e-08
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
12gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genom... 68 4e-08
13emb|X82151.1|CCPAX6DNA C.coturnix Pax-QNR gene 44 0.54
14gb|AC121798.3| Mus musculus BAC clone RP23-426H21 from chromosom... 42 2.1
15gb|AE005684.1| Caulobacter crescentus CB15 section 10 of 359 of ... 42 2.1
16emb|AL928804.5| Mouse DNA sequence from clone RP23-87G8 on chrom... 42 2.1
17gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome... 40 8.4
18gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 8.4
19emb|AL392172.9| Human DNA sequence from clone RP11-452F19 on chr... 40 8.4
20emb|AL353579.17| Human DNA sequence from clone RP3-355M6 on chro... 40 8.4
21emb|AL139044.15| Human DNA sequence from clone RP11-6B20 on chro... 40 8.4
22gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 8.4
23dbj|AK128213.1| Homo sapiens cDNA FLJ46345 fis, clone TESTI4047305 40 8.4
24gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, comp... 40 8.4
25gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, comp... 40 8.4
26ref|NM_023697.1| Mus musculus retinol dehydrogenase 14 (all-tran... 40 8.4
27dbj|AK014097.1| Mus musculus 13 days embryo head cDNA, RIKEN ful... 40 8.4
28dbj|AK039931.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 8.4
29gb|AF303831.1|AF303831 Mus musculus alcohol dehydrogenase PAN2 m... 40 8.4
30gb|BC092299.1| Mus musculus retinol dehydrogenase 14 (all-trans ... 40 8.4
31dbj|BS000138.1| Pan troglodytes chromosome 22 clone:LA-PCR-2, ma... 40 8.4
32gb|BC020094.1| Mus musculus retinol dehydrogenase 14 (all-trans ... 40 8.4
33gb|AY106207.1| Zea mays PCO121644 mRNA sequence 40 8.4
34gb|AC006313.1|AC006313 Homo sapiens chromosome 9, clone hRPK.465... 40 8.4
35dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.4
36dbj|D26351.1|HUMHT3I Homo sapiens mRNA for type 3 inositol 1,4,5... 40 8.4
37emb|AL162254.17| Human DNA sequence from clone RP11-64P14 on chr... 40 8.4
38dbj|AB209739.1| Homo sapiens mRNA for Inositol 1,4,5-trisphospha... 40 8.4
39dbj|AP001472.1| Homo sapiens genomic DNA, chromosome 21q22.3, cl... 40 8.4
40dbj|D13229.1|PSEPHT Pseudomonas putida plasmid NMH102-2 PHT1-5 g... 40 8.4 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             complete sequence
          Length = 43261740

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 469   cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
             ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 61869 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 61810

                            
Query: 529   ctggagtagatgtag 543
             |||||||||||||||
Sbjct: 61809 ctggagtagatgtag 61795



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 333   ggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacgccgagggt 392
             ||||||||||||||| || || | |||||| |||||||| |||| |||   ||| || ||
Sbjct: 62095 ggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtgcccagagt 62036

                               
Query: 393   ctgccagatctcgtagta 410
             ||||||||||||||||||
Sbjct: 62035 ctgccagatctcgtagta 62018
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672D08
          Length = 173729

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 469   cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
             ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 59671 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 59612

                            
Query: 529   ctggagtagatgtag 543
             |||||||||||||||
Sbjct: 59611 ctggagtagatgtag 59597



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 333   ggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacgccgagggt 392
             ||||||||||||||| || || | |||||| |||||||| |||| |||   ||| || ||
Sbjct: 59897 ggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtgcccagagt 59838

                               
Query: 393   ctgccagatctcgtagta 410
             ||||||||||||||||||
Sbjct: 59837 ctgccagatctcgtagta 59820
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>dbj|AK119457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E05, full
           insert sequence
          Length = 3112

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 469 cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
           ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 669 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 610

                          
Query: 529 ctggagtagatgtag 543
           |||||||||||||||
Sbjct: 609 ctggagtagatgtag 595



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcagggagcggcgcgttcccaggtctgatcgatataagcacctcaagacctgcatccctt 324
           |||||||| || ||||| ||||| ||||  ||||| | ||||||||| ||||||  | ||
Sbjct: 873 tcagggaggggtgcgtttccaggcctgacagatattatcacctcaaggcctgcagtcttt 814

                                                                       
Query: 325 gcagcggtggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacg 384
           || || | ||||||||||||||| || || | |||||| |||||||| |||| |||   |
Sbjct: 813 gctgcagcggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtg 754

                                     
Query: 385 ccgagggtctgccagatctcgtagta 410
           || || ||||||||||||||||||||
Sbjct: 753 cccagagtctgccagatctcgtagta 728
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>dbj|AK104517.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C10, full
           insert sequence
          Length = 1136

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 469 cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
           ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 711 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 652

                          
Query: 529 ctggagtagatgtag 543
           |||||||||||||||
Sbjct: 651 ctggagtagatgtag 637



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcagggagcggcgcgttcccaggtctgatcgatataagcacctcaagacctgcatccctt 324
           |||||||| || ||||| ||||| ||||  ||||| | ||||||||| ||||||  | ||
Sbjct: 915 tcagggaggggtgcgtttccaggcctgacagatattatcacctcaaggcctgcagtcttt 856

                                                                       
Query: 325 gcagcggtggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacg 384
           || || | ||||||||||||||| || || | |||||| |||||||| |||| |||   |
Sbjct: 855 gctgcagcggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtg 796

                                     
Query: 385 ccgagggtctgccagatctcgtagta 410
           || || ||||||||||||||||||||
Sbjct: 795 cccagagtctgccagatctcgtagta 770
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>dbj|AK104752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F07, full
           insert sequence
          Length = 1127

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 469 cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
           ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 707 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 648

                          
Query: 529 ctggagtagatgtag 543
           |||||||||||||||
Sbjct: 647 ctggagtagatgtag 633



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcagggagcggcgcgttcccaggtctgatcgatataagcacctcaagacctgcatccctt 324
           |||||||| || ||||| ||||| ||||  ||||| | ||||||||| ||||||  | ||
Sbjct: 911 tcagggaggggtgcgtttccaggcctgacagatattatcacctcaaggcctgcagtcttt 852

                                                                       
Query: 325 gcagcggtggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacg 384
           || || | ||||||||||||||| || || | |||||| |||||||| |||| |||   |
Sbjct: 851 gctgcagcggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtg 792

                                     
Query: 385 ccgagggtctgccagatctcgtagta 410
           || || ||||||||||||||||||||
Sbjct: 791 cccagagtctgccagatctcgtagta 766
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>dbj|AK104625.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A09, full
           insert sequence
          Length = 1127

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 469 cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
           ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 707 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 648

                          
Query: 529 ctggagtagatgtag 543
           |||||||||||||||
Sbjct: 647 ctggagtagatgtag 633



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcagggagcggcgcgttcccaggtctgatcgatataagcacctcaagacctgcatccctt 324
           |||||||| || ||||| ||||| ||||  ||||| | ||||||||| ||||||  | ||
Sbjct: 911 tcagggaggggtgcgtttccaggcctgacagatattatcacctcaaggcctgcagtcttt 852

                                                                       
Query: 325 gcagcggtggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacg 384
           || || | ||||||||||||||| || || | |||||| |||||||| |||| |||   |
Sbjct: 851 gctgcagcggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtg 792

                                     
Query: 385 ccgagggtctgccagatctcgtagta 410
           || || ||||||||||||||||||||
Sbjct: 791 cccagagtctgccagatctcgtagta 766
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>dbj|AK067866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127C12, full
           insert sequence
          Length = 1206

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 469 cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
           ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 722 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 663

                          
Query: 529 ctggagtagatgtag 543
           |||||||||||||||
Sbjct: 662 ctggagtagatgtag 648



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 119/146 (81%)
 Strand = Plus / Minus

                                                                       
Query: 265 tcagggagcggcgcgttcccaggtctgatcgatataagcacctcaagacctgcatccctt 324
           |||||||| || ||||| ||||| ||||  ||||| | ||||||||| ||||||  | ||
Sbjct: 926 tcagggaggggtgcgtttccaggcctgacagatattatcacctcaaggcctgcagtcttt 867

                                                                       
Query: 325 gcagcggtggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacg 384
           || || | ||||||||||||||| || || | |||||| |||||||| |||| |||   |
Sbjct: 866 gctgcagcggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtg 807

                                     
Query: 385 ccgagggtctgccagatctcgtagta 410
           || || ||||||||||||||||||||
Sbjct: 806 cccagagtctgccagatctcgtagta 781
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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455C04
          Length = 147940

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 469   cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
             ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 10415 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 10356

                            
Query: 529   ctggagtagatgtag 543
             |||||||||||||||
Sbjct: 10355 ctggagtagatgtag 10341



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 333   ggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacgccgagggt 392
             ||||||||||||||| || || | |||||| |||||||| |||| |||   ||| || ||
Sbjct: 10641 ggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtgcccagagt 10582

                               
Query: 393   ctgccagatctcgtagta 410
             ||||||||||||||||||
Sbjct: 10581 ctgccagatctcgtagta 10564
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>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0402A09
          Length = 141966

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 469   cggaggtcgccgtgggcggcggtgttgccgaagangagccgctgcgcctccctgctgccg 528
             ||||| |||||||| || ||||||||| |||||| ||| ||||| ||||||||||| |||
Sbjct: 46799 cggagatcgccgtgtgcagcggtgttggcgaagatgaggcgctgggcctccctgcttccg 46740

                            
Query: 529   ctggagtagatgtag 543
             |||||||||||||||
Sbjct: 46739 ctggagtagatgtag 46725



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 333   ggcttcttggtagacatcggtgaggaagagtatctgggacgggctgtcgacgccgagggt 392
             ||||||||||||||| || || | |||||| |||||||| |||| |||   ||| || ||
Sbjct: 47025 ggcttcttggtagacgtctgtcaagaagaggatctgggaggggcggtccgtgcccagagt 46966

                               
Query: 393   ctgccagatctcgtagta 410
             ||||||||||||||||||
Sbjct: 46965 ctgccagatctcgtagta 46948
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 487      gcggtgttgccgaagangagccgctgcgcctccctgctgccgctggagtagatgtag 543
                ||||||||| |||||| ||| |||||  |||||||||| ||||||||||||||||||
Sbjct: 23410081 gcggtgttggcgaagatgaggcgctggacctccctgcttccgctggagtagatgtag 23410025
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 487      gcggtgttgccgaagangagccgctgcgcctccctgctgccgctggagtagatgtag 543
                ||||||||| |||||| ||| |||||  |||||||||| ||||||||||||||||||
Sbjct: 23403109 gcggtgttggcgaagatgaggcgctggacctccctgcttccgctggagtagatgtag 23403053
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>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete
             sequence
          Length = 129647

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 487   gcggtgttgccgaagangagccgctgcgcctccctgctgccgctggagtagatgtag 543
             ||||||||| |||||| ||| |||||  |||||||||| ||||||||||||||||||
Sbjct: 92737 gcggtgttggcgaagatgaggcgctggacctccctgcttccgctggagtagatgtag 92681
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>emb|X82151.1|CCPAX6DNA C.coturnix Pax-QNR gene
          Length = 1140

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 267 agggagcggcgcgttcccaggt 288
           ||||||||||||||||||||||
Sbjct: 627 agggagcggcgcgttcccaggt 606
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>gb|AC121798.3| Mus musculus BAC clone RP23-426H21 from chromosome 2, complete sequence
          Length = 209189

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 132    tacacggtaaaaaagagagctttga 156
              ||||| |||||||||||||||||||
Sbjct: 180994 tacacagtaaaaaagagagctttga 180970
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>gb|AE005684.1| Caulobacter crescentus CB15 section 10 of 359 of the complete genome
          Length = 12336

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 436  acattggtgtcgaagaaggcg 456
            |||||||||||||||||||||
Sbjct: 3268 acattggtgtcgaagaaggcg 3288
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>emb|AL928804.5| Mouse DNA sequence from clone RP23-87G8 on chromosome 2, complete
             sequence
          Length = 127800

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 132   tacacggtaaaaaagagagctttga 156
             ||||| |||||||||||||||||||
Sbjct: 80482 tacacagtaaaaaagagagctttga 80458
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>gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome 12, complete sequence
          Length = 227238

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    cgcctccctgctgccgctgg 532
              ||||||||||||||||||||
Sbjct: 104626 cgcctccctgctgccgctgg 104645
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 481     tgggcggcggtgttgccgaagangagc 507
               |||| ||||||||||||||||| ||||
Sbjct: 2120153 tgggtggcggtgttgccgaagaagagc 2120179
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>emb|AL392172.9| Human DNA sequence from clone RP11-452F19 on chromosome 1 Contains the 5'
              end of the gene for a novel protein (FLJ12806), the gene
              for a novel protein (FLJ32421), two novel genes, the 5' end
              of two variants of the DISP1 gene for dispatched homolog 1
              (Drosophila) and a CpG island, complete sequence
          Length = 195849

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 509    gctgcgcctccctgctgccgctgg 532
              |||||||||||||||||| |||||
Sbjct: 107105 gctgcgcctccctgctgcagctgg 107082
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>emb|AL353579.17| Human DNA sequence from clone RP3-355M6 on chromosome 6 Contains the
             PIM1 gene for pim-1 oncogene (PIM), a novel gene, the 5'
             end of the TBC1D22B gene for TBC1D22B and a CpG island,
             complete sequence
          Length = 134010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 512   gcgcctccctgctgccgctggagt 535
             ||||||||||||||| ||||||||
Sbjct: 79339 gcgcctccctgctgcagctggagt 79362
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>emb|AL139044.15| Human DNA sequence from clone RP11-6B20 on chromosome 6 Contains the
             ITPR3 gene for inositol 1,4,5-triphosphate receptor type
             3, a novel gene and the IHPK3 gene for inositol
             hexaphosphate kinase 3, complete sequence
          Length = 134250

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   cctccctgctgccgctggag 534
             ||||||||||||||||||||
Sbjct: 65499 cctccctgctgccgctggag 65518
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   cgcctccctgctgccgctgg 532
             ||||||||||||||||||||
Sbjct: 96236 cgcctccctgctgccgctgg 96255
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>dbj|AK128213.1| Homo sapiens cDNA FLJ46345 fis, clone TESTI4047305
          Length = 3925

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 515  cctccctgctgccgctggag 534
            ||||||||||||||||||||
Sbjct: 2969 cctccctgctgccgctggag 2950
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>gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, complete sequence
          Length = 102001

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   aacacttgtctgcatatggc 193
             ||||||||||||||||||||
Sbjct: 41814 aacacttgtctgcatatggc 41795
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>gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, complete sequence
          Length = 208660

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    aacacttgtctgcatatggc 193
              ||||||||||||||||||||
Sbjct: 158930 aacacttgtctgcatatggc 158911
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>ref|NM_023697.1| Mus musculus retinol dehydrogenase 14 (all-trans and 9-cis)
           (Rdh14), mRNA
          Length = 1492

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 cgcctccctgctgccgctgg 532
           ||||||||||||||||||||
Sbjct: 184 cgcctccctgctgccgctgg 165
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>dbj|AK014097.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3110030G19 product:retinol dehydrogenase
           14 (all-trans and 9-cis), full insert sequence
          Length = 2354

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 cgcctccctgctgccgctgg 532
           ||||||||||||||||||||
Sbjct: 138 cgcctccctgctgccgctgg 119
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>dbj|AK039931.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430032J12 product:unclassifiable, full
           insert sequence
          Length = 1074

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 513 cgcctccctgctgccgctgg 532
           ||||||||||||||||||||
Sbjct: 387 cgcctccctgctgccgctgg 406
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>gb|AF303831.1|AF303831 Mus musculus alcohol dehydrogenase PAN2 mRNA, complete cds
          Length = 1492

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 cgcctccctgctgccgctgg 532
           ||||||||||||||||||||
Sbjct: 184 cgcctccctgctgccgctgg 165
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>gb|BC092299.1| Mus musculus retinol dehydrogenase 14 (all-trans and 9-cis), mRNA
           (cDNA clone MGC:102420 IMAGE:5060293), complete cds
          Length = 1480

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 cgcctccctgctgccgctgg 532
           ||||||||||||||||||||
Sbjct: 165 cgcctccctgctgccgctgg 146
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>dbj|BS000138.1| Pan troglodytes chromosome 22 clone:LA-PCR-2, map 22, complete
           sequences
          Length = 8545

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 ctggaagccgtgatcctcag 268
           ||||||||||||||||||||
Sbjct: 652 ctggaagccgtgatcctcag 671
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>gb|BC020094.1| Mus musculus retinol dehydrogenase 14 (all-trans and 9-cis), mRNA
           (cDNA clone MGC:28314 IMAGE:4014290), complete cds
          Length = 1501

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 cgcctccctgctgccgctgg 532
           ||||||||||||||||||||
Sbjct: 157 cgcctccctgctgccgctgg 138
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>gb|AY106207.1| Zea mays PCO121644 mRNA sequence
          Length = 1919

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 332  tggcttcttggtagacatcggtga 355
            ||||||||||| ||||||||||||
Sbjct: 1574 tggcttcttggaagacatcggtga 1551
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>gb|AC006313.1|AC006313 Homo sapiens chromosome 9, clone hRPK.465_F_21, complete sequence
          Length = 186555

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ctggaagccgtgatcctcag 268
             ||||||||||||||||||||
Sbjct: 42997 ctggaagccgtgatcctcag 43016
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>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ctggaagccgtgatcctcag 268
             ||||||||||||||||||||
Sbjct: 94706 ctggaagccgtgatcctcag 94725
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>dbj|D26351.1|HUMHT3I Homo sapiens mRNA for type 3 inositol 1,4,5-trisphosphate receptor,
            complete cds
          Length = 8404

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 515  cctccctgctgccgctggag 534
            ||||||||||||||||||||
Sbjct: 4398 cctccctgctgccgctggag 4417
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>emb|AL162254.17| Human DNA sequence from clone RP11-64P14 on chromosome 9 Contains five
             genes for a novel olfactory (seven transmembrane helix)
             receptor,  a tousled-like kinase 1 (TLK1) pseudogene and a
             novel gene, complete sequence
          Length = 109514

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ctggaagccgtgatcctcag 268
             ||||||||||||||||||||
Sbjct: 74034 ctggaagccgtgatcctcag 74053
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>dbj|AB209739.1| Homo sapiens mRNA for Inositol 1,4,5-trisphosphate receptor type 3
            variant protein
          Length = 7807

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 515  cctccctgctgccgctggag 534
            ||||||||||||||||||||
Sbjct: 3174 cctccctgctgccgctggag 3193
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>dbj|AP001472.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B804K23, telomere
             region, complete sequence
          Length = 26467

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ctggaagccgtgatcctcag 268
             ||||||||||||||||||||
Sbjct: 16981 ctggaagccgtgatcctcag 17000
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>dbj|D13229.1|PSEPHT Pseudomonas putida plasmid NMH102-2 PHT1-5 genes, complete cds
          Length = 6947

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  cgtgatcctcagggagcggc 276
            ||||||||||||||||||||
Sbjct: 6355 cgtgatcctcagggagcggc 6374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,021,893
Number of Sequences: 3902068
Number of extensions: 4021893
Number of successful extensions: 68978
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68744
Number of HSP's gapped (non-prelim): 234
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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