ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62n11 |
|---|---|
| Clone Library Name | barley_pub |
>FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 Score = 144 bits (364), Expect = 2e-34 Identities = 72/91 (79%), Positives = 76/91 (83%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 EDYKCSWLVVQAL+ ADESQKRIL ENYGK DP VAKVK+LYKELDL F ++E ESY Sbjct: 260 EDYKCSWLVVQALERADESQKRILFENYGKKDPACVAKVKNLYKELDLEAVFQEYENESY 319 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KLI DIEAQPS AVQKVL SFL KIYKRQK Sbjct: 320 KKLIADIEAQPSIAVQKVLKSFLHKIYKRQK 350
>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 122 bits (305), Expect = 1e-27 Identities = 61/91 (67%), Positives = 70/91 (76%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ ++E QK+IL ENYGK DP SVAKVK+LY L+L F +E SY Sbjct: 252 EDFKCSWLVVKALELSNEEQKKILHENYGKKDPSSVAKVKELYHTLNLQGVFEDYENTSY 311 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KLIT IE PSKAVQ VL SFL KIYKRQK Sbjct: 312 KKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 342
>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 120 bits (302), Expect = 3e-27 Identities = 60/91 (65%), Positives = 71/91 (78%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ E Q +IL ENYGK++P +VAKVK LYKELDL AF ++E+ESY Sbjct: 252 EDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESY 311 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KL IEA SKA+Q VL SFL KIYKRQK Sbjct: 312 EKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342
>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 120 bits (300), Expect = 5e-27 Identities = 59/91 (64%), Positives = 69/91 (75%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ A+E QK++L ENYGK DP VAKVK+LY L+L F +E SY Sbjct: 252 EDFKCSWLVVKALELANEEQKKVLHENYGKKDPSPVAKVKELYNTLNLQGVFEDYENTSY 311 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KLIT IE PSKAVQ VL SFL KIY+RQK Sbjct: 312 KKLITSIEGHPSKAVQAVLKSFLGKIYRRQK 342
>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial| precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 384 Score = 119 bits (298), Expect = 8e-27 Identities = 59/91 (64%), Positives = 68/91 (74%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ E Q +IL ENYGK DP +VAKVKDLYKELDL F ++E +SY Sbjct: 294 EDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSY 353 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KL IE SKA+Q VL SFL KIYKRQK Sbjct: 354 EKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384
>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 119 bits (298), Expect = 8e-27 Identities = 57/91 (62%), Positives = 73/91 (80%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ +++ QK++L +NYGK DP +VAKVK LY EL+L F ++E +SY Sbjct: 252 EDFKCSWLVVKALELSNDEQKKVLYDNYGKPDPANVAKVKALYDELNLQGVFTEYESKSY 311 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KL+T IEA PSKAVQ +L SFL KIYKRQK Sbjct: 312 EKLVTSIEAHPSKAVQALLKSFLGKIYKRQK 342
>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 118 bits (295), Expect = 2e-26 Identities = 58/91 (63%), Positives = 71/91 (78%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ ++E QK++L ENYGK DP +VAKVK LY EL+L A+ +E +SY Sbjct: 252 EDFKCSWLVVKALELSNEEQKKVLYENYGKPDPANVAKVKTLYNELNLEGAYADYESKSY 311 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KL+T IE PSKAVQ VL SF KIYKRQK Sbjct: 312 EKLVTCIEGHPSKAVQGVLKSFWAKIYKRQK 342
>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 343 Score = 117 bits (293), Expect = 3e-26 Identities = 59/91 (64%), Positives = 68/91 (74%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+KCSWLVV+AL+ +E QK+ L ENYGK DP SVAKVK++Y L+L F +E SY Sbjct: 253 EDFKCSWLVVKALELPNEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQAVFEDYEATSY 312 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KLIT IE PSKAVQ VL SFL KIYKRQK Sbjct: 313 KKLITSIENHPSKAVQAVLKSFLGKIYKRQK 343
>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 341 Score = 112 bits (281), Expect = 7e-25 Identities = 59/91 (64%), Positives = 68/91 (74%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 ED+ SWLVV+AL+ A+E QK++L ENYGK DP SVAKVK+LY L+L F +E SY Sbjct: 252 EDFS-SWLVVKALELANEEQKKVLHENYGKKDPSSVAKVKELYNTLNLQGVFEDYESTSY 310 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KLIT IE PSKAVQ VL SFL KIYKRQK Sbjct: 311 KKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 341
>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 94.4 bits (233), Expect = 3e-19 Identities = 47/91 (51%), Positives = 61/91 (67%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSWLVVQ L A Q++IL ENYG+ DPE VA+VK LY+ LDL +AF K+E +SY Sbjct: 263 QDNKCSWLVVQCLLRASPQQRQILEENYGQKDPEKVARVKALYEALDLQSAFFKYEEDSY 322 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 N+L + IE + + M KIYKR+K Sbjct: 323 NRLKSLIEQCSAPLPPSIFMELANKIYKRRK 353
>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 93.6 bits (231), Expect = 5e-19 Identities = 46/91 (50%), Positives = 61/91 (67%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSWLVVQ L A Q++IL ENYG+ DPE VA+VK LY+ELDL + F K+E +SY Sbjct: 263 QDNKCSWLVVQCLLRATPQQRQILEENYGQKDPEKVARVKALYEELDLRSVFFKYEEDSY 322 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 N+L + IE + + + KIYKR+K Sbjct: 323 NRLKSLIEQCSAPLPPSIFLELANKIYKRRK 353
>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 367 Score = 88.2 bits (217), Expect = 2e-17 Identities = 39/91 (42%), Positives = 60/91 (65%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSWLVVQ L Q+++L +NYG+ +PE VAKVK+LY+ + + AF ++E SY Sbjct: 277 QDNKCSWLVVQCLQRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSY 336 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 +L IE ++ +++ + +KIYKRQK Sbjct: 337 RRLQELIEKHSNRLPKEIFLGLAQKIYKRQK 367
>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 84.3 bits (207), Expect = 3e-16 Identities = 42/91 (46%), Positives = 57/91 (62%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSWLVVQ L A Q +IL ENYG+ + E VA+VK LY+ELDL F ++E +SY Sbjct: 263 QDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSY 322 Query: 468 NKLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 + ++ IE + V + KIYKR+K Sbjct: 323 SHIMALIEQYAAPLPPAVFLGLARKIYKRRK 353
>FPPS_KLULA (P49349) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 349 Score = 67.4 bits (163), Expect = 3e-11 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 4/95 (4%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSW++ AL +A + Q+ IL ENYG+ D E K + ++ EL++ +HK+E E+ Sbjct: 257 QDNKCSWVINVALKNATKEQRDILDENYGRKDSEKEQKCRAVFNELNIQDIYHKYEEETA 316 Query: 468 NKLITDI----EAQPSKAVQKVLMSFLEKIYKRQK 376 + L I E++ KA +VL FL KIY R+K Sbjct: 317 SNLREKIANIDESRGFKA--EVLTLFLNKIYHRKK 349
>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 65.9 bits (159), Expect = 1e-10 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 2/93 (2%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSWLV +AL Q++ L ENYG+ D A +K LY +L L + ++E E Sbjct: 255 QDNKCSWLVNKALSIVTPEQRKTLEENYGRKDKAKEAVIKQLYDDLKLEDHYKQYEEERV 314 Query: 468 NKLITDIEA-QPSKAVQK-VLMSFLEKIYKRQK 376 ++ I+A SK ++K V +FL KIYKR K Sbjct: 315 GEIRKMIDAIDESKGLKKQVFEAFLGKIYKRSK 347
>FPPS_YEAST (P08524) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 352 Score = 65.5 bits (158), Expect = 1e-10 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 6/97 (6%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSW++ +AL+ A Q++ L ENYGK D + AK K ++ +L + +H++E Sbjct: 260 QDNKCSWVINKALELASAEQRKTLDENYGKKDSVAEAKCKKIFNDLKIEQLYHEYE---- 315 Query: 468 NKLITDIEAQPSKAVQK------VLMSFLEKIYKRQK 376 + D++A+ S+ + VL +FL K+YKR K Sbjct: 316 ESIAKDLKAKISQVDESRGFKADVLTAFLNKVYKRSK 352
>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 62.8 bits (151), Expect = 9e-10 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 3/94 (3%) Frame = -2 Query: 648 EDYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESY 469 +D KCSWLV QAL A Q++IL ENYG+ D E VK LY +L+L + +E + Sbjct: 255 KDNKCSWLVNQALAVATPEQRKILEENYGRKDDEKEKVVKKLYDDLNLEQRYLDYEEKVV 314 Query: 468 NKL---ITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 ++ I +I+ + + V +FL KIYKR K Sbjct: 315 GQIRERIANID-ENDGLKKTVFEAFLAKIYKRSK 347
>FPPS_SCHPO (O14230) Probable farnesyl pyrophosphate synthetase (FPP| synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 60.1 bits (144), Expect = 6e-09 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%) Frame = -2 Query: 645 DYKCSWLVVQALDHADESQKRILLENYGKSDPESVAKVKDLYKELDLXTAFHKFERESYN 466 D KCSW++ AL Q+ IL +NYG+ D ES +VK +++EL++ F +E + Sbjct: 256 DNKCSWIINLALAKCTPEQRVILDDNYGRKDSESEKRVKAVFEELNIRGEFENYEESEVS 315 Query: 465 ---KLITDIEAQPSKAVQKVLMSFLEKIYKRQK 376 KLI ++ + + + + +FL KIYKR K Sbjct: 316 EIKKLIDGVD-ESTGLKKSIFTTFLGKIYKRNK 347
>SYM_CLOAB (Q97EW5) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 644 Score = 31.2 bits (69), Expect = 2.8 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Frame = -2 Query: 549 ESVAKVKDLYKELDLXTAFHKFERESYNKLITDIEAQPSKAVQKVLMSFLEK--IYK 385 E VA +KDL+K +++ SY+K I + + KAVQK++ F + IYK Sbjct: 75 EIVAGIKDLWKMMNI----------SYDKFIRTTDEEHVKAVQKIVKKFYDNGDIYK 121
>YO84_CAEEL (P34620) Hypothetical protein ZK1236.4| Length = 364 Score = 30.4 bits (67), Expect = 4.7 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = -2 Query: 630 WLVVQALDHADESQKRILLENYGKSDPESVAKVKDLY--KELDLXTAFHKF---ERESYN 466 +LV + LD D +K I L Y + ++ + Y K + L T +K R Y Sbjct: 186 FLVSEKLDFTDHWKKTINLTKY------QLFQIFNTYSSKSVKLMTLLYKTFIRPRLEYG 239 Query: 465 KLITD-IEAQPSKAVQKVLMSFLEKIYKRQK 376 +IT I+ SKA++ V +F + Y R K Sbjct: 240 TVITSPIKKNDSKAIESVQNAFTRRFYSRMK 270
>ZNF12_HUMAN (P17014) Zinc finger protein 12 (Zinc finger protein KOX3) (Zinc| finger protein 325) (Gonadotropin-inducible transcription repressor 3) (GIOT-3) Length = 501 Score = 30.4 bits (67), Expect = 4.7 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 Query: 10 NTGVKCYKSNTWVKCYKSCRKTTFQTQLKAVLG 108 +TGVK YK + KC+ CRK+T T L+ G Sbjct: 403 HTGVKLYKCSECGKCF--CRKSTLTTHLRTHTG 433
>PHEA_BUCAI (P57472) P-protein [Includes: Chorismate mutase (EC 5.4.99.5) (CM);| Prephenate dehydratase (EC 4.2.1.51) (PDT)] Length = 385 Score = 29.6 bits (65), Expect = 8.0 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Frame = -2 Query: 549 ESVAKVKDLYKELDLXTAFHKFERESYNKLITDIEAQPSKAVQKVLMSFLEKIYKRQK*S 370 + + K+ K L A K E N+ I DIE + K +QK++ FL K Y + Sbjct: 19 KKIVKLLAERKNLVFKIAQSKIEN---NQAIRDIERE-KKMLQKLI--FLGKKYNLKS-- 70 Query: 369 *ACGQISNLFYVLLRVMV-----ILFQYCTVHHGIIPSNSKYFGP 250 I+ LF +++ V +L ++C H+ +IP+N + GP Sbjct: 71 ---EYITQLFQLIIEESVATQKKLLKKFCN-HNKLIPANFSFLGP 111
>VANC_ENTGA (P29753) Vancomycin C-type resistance protein vanC (EC 6.3.2.-)| (VanC ligase) Length = 343 Score = 29.6 bits (65), Expect = 8.0 Identities = 9/29 (31%), Positives = 19/29 (65%) Frame = +1 Query: 4 WYNTGVKCYKSNTWVKCYKSCRKTTFQTQ 90 WY + +++TW++ +K+C + TF +Q Sbjct: 49 WYQGNLANVRNDTWLEDHKNCHQLTFSSQ 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,439,923 Number of Sequences: 219361 Number of extensions: 1735416 Number of successful extensions: 4304 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4303 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
