Clone Name | rbah62n11 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full insert mRNA sequence Length = 1301 Score = 490 bits (247), Expect = e-135 Identities = 276/286 (96%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1122 agcttagctctacttctgcctcttgtagatcttctccaggaaagacatcaaaactttctg 1063 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctc 483 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 1062 aacagctttgcttggctgggcctcgatgtcggcgatcagcttattgtagctctcccgctc 1003 Query: 484 aaacttgtgaaatgccgtctncagatcaagttctttatacagatccttcacttttgcaac 543 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 atacttgtgaaatgccgtctccagatcaagttctttatacagatccttcacttttgcaac 943 Query: 544 agactctggatctgactttccataattttcaagtagaatgcgcttttggctctcatctgc 603 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 942 agactctggatctgacttcccataattttcaagtagaatgcccttttggctctcatctgc 883 Query: 604 atggtcaagagcttgcacaactaaccaggaacacttgtagtcttca 649 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 atgctcaagagcttgcacaactaaccaggaacacttgtagtcttca 837
>dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D06, full insert sequence Length = 1332 Score = 220 bits (111), Expect = 4e-54 Identities = 242/286 (84%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 ||||||||||||||||||||||||||||||||| | || |||||| |||| || ||||| Sbjct: 1155 agcttagctctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctg 1096 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctc 483 ||| |||||| | || || || || ||||||| |||||||||||||| ||||| | ||| Sbjct: 1095 aactgctttgttcggatgtgcttcgatgtcggcaatcagcttattgtaactctccctctc 1036 Query: 484 aaacttgtgaaatgccgtctncagatcaagttctttatacagatccttcacttttgcaac 543 | | |||||| | | || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 1035 gtattcatgaaatacggcctccagattaagttctttatacagatccttcacttttgcaac 976 Query: 544 agactctggatctgactttccataattttcaagtagaatgcgcttttggctctcatctgc 603 | | || ||||||| ||| ||||||||||||| ||||||| |||||||| |||| || || Sbjct: 975 acattcaggatctggcttcccataattttcaaatagaatgtgcttttggttctcgtcagc 916 Query: 604 atggtcaagagcttgcacaactaaccaggaacacttgtagtcttca 649 | | || |||||||||||||||||||| || ||||||||||||||| Sbjct: 915 acgctcgagagcttgcacaactaaccatgagcacttgtagtcttca 870
>dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl pyrophosphate synthase, complete cds Length = 1289 Score = 220 bits (111), Expect = 4e-54 Identities = 242/286 (84%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 ||||||||||||||||||||||||||||||||| | || |||||| |||| || ||||| Sbjct: 1112 agcttagctctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctg 1053 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctc 483 ||| |||||| | || || || || ||||||| |||||||||||||| ||||| | ||| Sbjct: 1052 aactgctttgttcggatgtgcttcgatgtcggcaatcagcttattgtaactctccctctc 993 Query: 484 aaacttgtgaaatgccgtctncagatcaagttctttatacagatccttcacttttgcaac 543 | | |||||| | | || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 992 gtattcatgaaatacggcctccagattaagttctttatacagatccttcacttttgcaac 933 Query: 544 agactctggatctgactttccataattttcaagtagaatgcgcttttggctctcatctgc 603 | | || ||||||| ||| ||||||||||||| ||||||| |||||||| |||| || || Sbjct: 932 acattcaggatctggcttcccataattttcaaatagaatgtgcttttggttctcgtcagc 873 Query: 604 atggtcaagagcttgcacaactaaccaggaacacttgtagtcttca 649 | | || |||||||||||||||||||| || ||||||||||||||| Sbjct: 872 acgctcgagagcttgcacaactaaccatgagcacttgtagtcttca 827
>ref|NM_192229.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 202 bits (102), Expect = 1e-48 Identities = 233/277 (84%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 |||||||||||||||||||||||| | || |||||| |||| || |||||||| ||||| Sbjct: 1062 ctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctgaactgcttt 1003 Query: 433 gcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgtg 492 | | || || || || ||||||| |||||||||||||| ||||| | ||| | | || Sbjct: 1002 gttcggatgtgcttcgatgtcggcaatcagcttattgtaactctccctctcgtattcatg 943 Query: 493 aaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctgg 552 |||| | | || ||||| |||||||||||||||||||||||||||||||||| | || || Sbjct: 942 aaatacggcctccagattaagttctttatacagatccttcacttttgcaacacattcagg 883 Query: 553 atctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaag 612 ||||| ||| ||||||||||||| ||||||| |||||||| |||| || ||| | || || Sbjct: 882 atctggcttcccataattttcaaatagaatgtgcttttggttctcgtcagcacgctcgag 823 Query: 613 agcttgcacaactaaccaggaacacttgtagtcttca 649 |||||||||||||||||| || ||||||||||||||| Sbjct: 822 agcttgcacaactaaccatgagcacttgtagtcttca 786
>gb|BT016427.1| Zea mays clone Contig260 mRNA sequence Length = 1469 Score = 194 bits (98), Expect = 3e-46 Identities = 232/277 (83%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 |||||||||||||||||||||||| | ||||||||| ||| ||||||||||| || | Sbjct: 1193 ctacttctgcctcttgtagatcttgtgcaagaaggatttcagcactttctgaaccgcaat 1134 Query: 433 gcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgtg 492 |||||||||||| |||||||| | |||||||| |||||||||||| ||| ||| || Sbjct: 1133 gcttggctgggcttcaatgtctgcaatcagcttcttgtagctctcattctcgtactcctg 1074 Query: 493 aaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctgg 552 |||| ||| || || ||||||||||| || || | |||||||||||| ||| | |||| Sbjct: 1073 aaataccgcctctaggtcaagttctttgtagaggttcttcacttttgccacacaggctgg 1014 Query: 553 atctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaag 612 |||| ||| ||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 1013 atctttcttgccataattttcaaatagaatgcgcttttggctctcatcagcacgctcaag 954 Query: 613 agcttgcacaactaaccaggaacacttgtagtcttca 649 ||||||||||||| ||| || |||||||| |||||| Sbjct: 953 ggcttgcacaactagccatgagcacttgtaatcttca 917
>gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate synthase mRNA, partial cds Length = 1250 Score = 194 bits (98), Expect = 3e-46 Identities = 232/277 (83%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 |||||||||||||||||||||||| | ||||||||| ||| ||||||||||| || | Sbjct: 1026 ctacttctgcctcttgtagatcttgtgcaagaaggatttcagcactttctgaaccgcaat 967 Query: 433 gcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgtg 492 |||||||||||| |||||||| | |||||||| |||||||||||| ||| ||| || Sbjct: 966 gcttggctgggcttcaatgtctgcaatcagcttcttgtagctctcattctcgtactcctg 907 Query: 493 aaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctgg 552 |||| ||| || || ||||||||||| || || | |||||||||||| ||| | |||| Sbjct: 906 aaataccgcctctaggtcaagttctttgtagaggttcttcacttttgccacacaggctgg 847 Query: 553 atctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaag 612 |||| ||| ||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 846 atctttcttgccataattttcaaatagaatgcgcttttggctctcatcagcacgctcaag 787 Query: 613 agcttgcacaactaaccaggaacacttgtagtcttca 649 ||||||||||||| ||| || |||||||| |||||| Sbjct: 786 ggcttgcacaactagccatgagcacttgtaatcttca 750
>gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA, complete cds Length = 1399 Score = 194 bits (98), Expect = 3e-46 Identities = 232/277 (83%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 |||||||||||||||||||||||| | ||||||||| ||| ||||||||||| || | Sbjct: 1175 ctacttctgcctcttgtagatcttgtgcaagaaggatttcagcactttctgaaccgcaat 1116 Query: 433 gcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgtg 492 |||||||||||| |||||||| | |||||||| |||||||||||| ||| ||| || Sbjct: 1115 gcttggctgggcttcaatgtctgcaatcagcttcttgtagctctcattctcgtactcctg 1056 Query: 493 aaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctgg 552 |||| ||| || || ||||||||||| || || | |||||||||||| ||| | |||| Sbjct: 1055 aaataccgcctctaggtcaagttctttgtagaggttcttcacttttgccacacaggctgg 996 Query: 553 atctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaag 612 |||| ||| ||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 995 atctttcttgccataattttcaaatagaatgcgcttttggctctcatcagcacgctcaag 936 Query: 613 agcttgcacaactaaccaggaacacttgtagtcttca 649 ||||||||||||| ||| || |||||||| |||||| Sbjct: 935 ggcttgcacaactagccatgagcacttgtaatcttca 899
>gb|AY108110.1| Zea mays PCO074380 mRNA sequence Length = 1453 Score = 194 bits (98), Expect = 3e-46 Identities = 232/277 (83%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 |||||||||||||||||||||||| | ||||||||| ||| ||||||||||| || | Sbjct: 1175 ctacttctgcctcttgtagatcttgtgcaagaaggatttcagcactttctgaaccgcaat 1116 Query: 433 gcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgtg 492 |||||||||||| |||||||| | |||||||| |||||||||||| ||| ||| || Sbjct: 1115 gcttggctgggcttcaatgtctgcaatcagcttcttgtagctctcattctcgtactcctg 1056 Query: 493 aaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctgg 552 |||| ||| || || ||||||||||| || || | |||||||||||| ||| | |||| Sbjct: 1055 aaataccgcctctaggtcaagttctttgtagaggttcttcacttttgccacacaggctgg 996 Query: 553 atctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaag 612 |||| ||| ||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 995 atctttcttgccataattttcaaatagaatgcgcttttggctctcatcagcacgctcaag 936 Query: 613 agcttgcacaactaaccaggaacacttgtagtcttca 649 ||||||||||||| ||| || |||||||| |||||| Sbjct: 935 ggcttgcacaactagccatgagcacttgtaatcttca 899
>gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (fps) mRNA, complete cds Length = 1378 Score = 194 bits (98), Expect = 3e-46 Identities = 232/277 (83%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 |||||||||||||||||||||||| | ||||||||| ||| ||||||||||| || | Sbjct: 1149 ctacttctgcctcttgtagatcttgtgcaagaaggatttcagcactttctgaaccgcaat 1090 Query: 433 gcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgtg 492 |||||||||||| |||||||| | |||||||| |||||||||||| ||| ||| || Sbjct: 1089 gcttggctgggcttcaatgtctgcaatcagcttcttgtagctctcattctcgtactcctg 1030 Query: 493 aaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctgg 552 |||| ||| || || ||||||||||| || || | |||||||||||| ||| | |||| Sbjct: 1029 aaataccgcctctaggtcaagttctttgtagaggttcttcacttttgccacacaggctgg 970 Query: 553 atctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaag 612 |||| ||| ||||||||||||| |||||||||||||||||||||||| ||| | ||||| Sbjct: 969 atctttcttgccataattttcaaatagaatgcgcttttggctctcatcagcacgctcaag 910 Query: 613 agcttgcacaactaaccaggaacacttgtagtcttca 649 ||||||||||||| ||| || |||||||| |||||| Sbjct: 909 ggcttgcacaactagccatgagcacttgtaatcttca 873
>gb|AY110411.1| Zea mays CL242_1 mRNA sequence Length = 2504 Score = 141 bits (71), Expect = 3e-30 Identities = 226/278 (81%) Strand = Plus / Minus Query: 372 tctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagctt 431 ||||||| | ||||||||||||||| | | ||||||| ||||||| | || || || | Sbjct: 1177 tctacttgtccctcttgtagatcttgtgaaggaaggacttcaaaacagtttggactgcct 1118 Query: 432 tgcttggctgggcctcaatgtcggtgatcagcttattgtagctctcacgctcaaacttgt 491 |||| ||||||||||| ||||||| |||||||| ||||| ||||| | ||| ||| | Sbjct: 1117 tgctcggctgggcctcgatgtcggcaatcagcttgttgtaactctccctctcgtactcat 1058 Query: 492 gaaatgccgtctncagatcaagttctttatacagatccttcacttttgcaacagactctg 551 | || || || ||| | ||| ||||| |||| |||||||| ||||||||| || ||| Sbjct: 1057 ggaaaacctcctccagtttaagctctttgtacaagtccttcacctttgcaacacacgctg 998 Query: 552 gatctgactttccataattttcaagtagaatgcgcttttggctctcatctgcatggtcaa 611 |||| |||||||| |||||||||| ||||||| ||||||| ||||| | ||| | |||| Sbjct: 997 gatcagactttccgtaattttcaaacagaatgctcttttggttctcagcagcacgctcaa 938 Query: 612 gagcttgcacaactaaccaggaacacttgtagtcttca 649 ||||||||||||||| ||||||||| |||||||||||| Sbjct: 937 gagcttgcacaactagccaggaacatttgtagtcttca 900
>gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence Length = 1208 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Minus Query: 509 tcaagttctttatacagatccttcacttttgcaacagactctggatctgactttccataa 568 ||||||||||| || || | |||||||||||| ||| | |||||||| ||| |||||| Sbjct: 818 tcaagttctttgtagaggttcttcacttttgccacacaggctggatctttcttgccataa 759 Query: 569 ttttcaagtagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaac 628 ||||||| |||||||||||||||||||||||| ||| | ||||| ||||||||||||| | Sbjct: 758 ttttcaaatagaatgcgcttttggctctcatcagcacgctcaagggcttgcacaactagc 699 Query: 629 caggaacacttgtagtcttca 649 || || |||||||| |||||| Sbjct: 698 catgagcacttgtaatcttca 678
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 ||||||||||||||||||||||||||||||||| | || |||||| |||| || ||||| Sbjct: 29155627 agcttagctctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctg 29155568 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctc 477 ||| |||||| | || || || || ||||||| |||||||||||||| ||||| Sbjct: 29155567 aactgctttgttcggatgtgcttcgatgtcggcaatcagcttattgtaactctc 29155514 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 505 cagatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcc 564 ||||| |||||||||||||||||||||||||||||||||| | || ||||||| ||| || Sbjct: 29155232 cagattaagttctttatacagatccttcacttttgcaacacattcaggatctggcttccc 29155173 Query: 565 ataattttc 573 ||||||||| Sbjct: 29155172 ataattttc 29155164 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||||| |||||||| |||| || ||| | || |||||||||||||||||||| || || Sbjct: 29155088 tagaatgtgcttttggttctcgtcagcacgctcgagagcttgcacaactaaccatgagca 29155029 Query: 637 cttgtagtcttca 649 ||||||||||||| Sbjct: 29155028 cttgtagtcttca 29155016 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 506 agatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcca 565 |||| |||||| ||||| |||||||||||||| |||||| | |||||||||| || ||| Sbjct: 28746047 agatgaagttcgttatatagatccttcactttggcaacacaagctggatctgatttccca 28746106 Query: 566 taattttc 573 |||||||| Sbjct: 28746107 taattttc 28746114
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 ||||||||||||||||||||||||||||||||| | || |||||| |||| || ||||| Sbjct: 115993 agcttagctctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctg 115934 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctc 477 ||| |||||| | || || || || ||||||| |||||||||||||| ||||| Sbjct: 115933 aactgctttgttcggatgtgcttcgatgtcggcaatcagcttattgtaactctc 115880 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 505 cagatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcc 564 ||||| |||||||||||||||||||||||||||||||||| | || ||||||| ||| || Sbjct: 115598 cagattaagttctttatacagatccttcacttttgcaacacattcaggatctggcttccc 115539 Query: 565 ataattttc 573 ||||||||| Sbjct: 115538 ataattttc 115530 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||||| |||||||| |||| || ||| | || |||||||||||||||||||| || || Sbjct: 115454 tagaatgtgcttttggttctcgtcagcacgctcgagagcttgcacaactaaccatgagca 115395 Query: 637 cttgtagtcttca 649 ||||||||||||| Sbjct: 115394 cttgtagtcttca 115382
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 ||||||||||||||||||||||||||||||||| | || |||||| |||| || ||||| Sbjct: 1414 agcttagctctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctg 1355 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctc 477 ||| |||||| | || || || || ||||||| |||||||||||||| ||||| Sbjct: 1354 aactgctttgttcggatgtgcttcgatgtcggcaatcagcttattgtaactctc 1301 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 505 cagatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcc 564 ||||| |||||||||||||||||||||||||||||||||| | || ||||||| ||| || Sbjct: 1019 cagattaagttctttatacagatccttcacttttgcaacacattcaggatctggcttccc 960 Query: 565 ataattttc 573 ||||||||| Sbjct: 959 ataattttc 951 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||||| |||||||| |||| || ||| | || |||||||||||||||||||| || || Sbjct: 875 tagaatgtgcttttggttctcgtcagcacgctcgagagcttgcacaactaaccatgagca 816 Query: 637 cttgtagtcttca 649 ||||||||||||| Sbjct: 815 cttgtagtcttca 803
>dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gene for farnesyl diphosphate synthase, complete cds Length = 7423 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 364 agcttagctctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctg 423 ||||||||||||||||||||||||||||||||| | || |||||| |||| || ||||| Sbjct: 5931 agcttagctctacttctgcctcttgtagatcttgtgcaggaaggatttcaatacattctg 5872 Query: 424 aacagctttgcttggctgggcctcaatgtcggtgatcagcttattgtagctctc 477 ||| |||||| | || || || || ||||||| |||||||||||||| ||||| Sbjct: 5871 aactgctttgttcggatgtgcttcgatgtcggcaatcagcttattgtaactctc 5818 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 505 cagatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcc 564 ||||| |||||||||||||||||||||||||||||||||| | || ||||||| ||| || Sbjct: 5536 cagattaagttctttatacagatccttcacttttgcaacacattcaggatctggcttccc 5477 Query: 565 ataattttc 573 ||||||||| Sbjct: 5476 ataattttc 5468 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||||| |||||||| |||| || ||| | || |||||||||||||||||||| || || Sbjct: 5392 tagaatgtgcttttggttctcgtcagcacgctcgagagcttgcacaactaaccatgagca 5333 Query: 637 cttgtagtcttca 649 ||||||||||||| Sbjct: 5332 cttgtagtcttca 5320
>dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A14, full insert sequence Length = 1452 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 529 cttcacttttgcaacagactctggatctgactttccataattttcaagtagaatgcgctt 588 |||||||||||| ||| | |||||||| ||||||||||||||||| ||||| || ||| Sbjct: 1117 cttcacttttgccacacaggctggatctttctttccataattttcaaatagaacgctctt 1058 Query: 589 ttggctctcatctgcatggtcaagagcttgcacaactaaccaggaacacttgtagtcttc 648 ||| |||||||| ||| | ||||| ||||||||||||| ||| || || ||||| ||||| Sbjct: 1057 ttgactctcatcagcacgctcaagggcttgcacaactagccaagagcatttgtaatcttc 998 Query: 649 a 649 | Sbjct: 997 a 997 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 ||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||||| | Sbjct: 1273 ctacttctgtctcttgtagatcttgtgcaagaaggacttcagaacattctgaacagctat 1214 Query: 433 gcttggctgggc 444 |||||||||||| Sbjct: 1213 gcttggctgggc 1202
>dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I20, full insert sequence Length = 1452 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 529 cttcacttttgcaacagactctggatctgactttccataattttcaagtagaatgcgctt 588 |||||||||||| ||| | |||||||| ||||||||||||||||| ||||| || ||| Sbjct: 1189 cttcacttttgccacacaggctggatctttctttccataattttcaaatagaacgctctt 1130 Query: 589 ttggctctcatctgcatggtcaagagcttgcacaactaaccaggaacacttgtagtcttc 648 ||| |||||||| ||| | ||||| ||||||||||||| ||| || || ||||| ||||| Sbjct: 1129 ttgactctcatcagcacgctcaagggcttgcacaactagccaagagcatttgtaatcttc 1070 Query: 649 a 649 | Sbjct: 1069 a 1069 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 ||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||||| | Sbjct: 1345 ctacttctgtctcttgtagatcttgtgcaagaaggacttcagaacattctgaacagctat 1286 Query: 433 gcttggctgggc 444 |||||||||||| Sbjct: 1285 gcttggctgggc 1274
>dbj|AB021979.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl diphosphate synthase, partial cds Length = 725 Score = 89.7 bits (45), Expect = 1e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 529 cttcacttttgcaacagactctggatctgactttccataattttcaagtagaatgcgctt 588 |||||||||||| ||| | |||||||| ||||||||||||||||| ||||| || ||| Sbjct: 406 cttcacttttgccacacaggctggatctttctttccataattttcaaatagaacgctctt 347 Query: 589 ttggctctcatctgcatggtcaagagcttgcacaactaaccaggaacacttgtagtcttc 648 ||| |||||||| ||| | ||||| ||||||||||||| ||| || || ||||| ||||| Sbjct: 346 ttgactctcatcagcacgctcaagggcttgcacaactagccaagagcatttgtaatcttc 287 Query: 649 a 649 | Sbjct: 286 a 286 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 ||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||||| | Sbjct: 562 ctacttctgtctcttgtagatcttgtgcaagaaggacttcagaacattctgaacagctat 503 Query: 433 gcttggctgggc 444 |||||||||||| Sbjct: 502 gcttggctgggc 491
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 ||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||||| | Sbjct: 41899 ctacttctgtctcttgtagatcttgtgcaagaaggacttcagaacattctgaacagctat 41958 Query: 433 gcttggctgggc 444 |||||||||||| Sbjct: 41959 gcttggctgggc 41970 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||| || |||||| |||||||| ||| | ||||| ||||||||||||| ||| || || Sbjct: 42399 tagaacgctcttttgactctcatcagcacgctcaagggcttgcacaactagccaagagca 42458 Query: 637 cttgtagtcttca 649 ||||| |||||| Sbjct: 42459 tttgtaatcttca 42471 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 529 cttcacttttgcaacagactctggatctgactttccataattttc 573 |||||||||||| ||| | |||||||| ||||||||||||||| Sbjct: 42281 cttcacttttgccacacaggctggatctttctttccataattttc 42325
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 ||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||||| | Sbjct: 26759960 ctacttctgtctcttgtagatcttgtgcaagaaggacttcagaacattctgaacagctat 26760019 Query: 433 gcttggctgggc 444 |||||||||||| Sbjct: 26760020 gcttggctgggc 26760031 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||| || |||||| |||||||| ||| | ||||| ||||||||||||| ||| || || Sbjct: 26760460 tagaacgctcttttgactctcatcagcacgctcaagggcttgcacaactagccaagagca 26760519 Query: 637 cttgtagtcttca 649 ||||| |||||| Sbjct: 26760520 tttgtaatcttca 26760532 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 529 cttcacttttgcaacagactctggatctgactttccataattttc 573 |||||||||||| ||| | |||||||| ||||||||||||||| Sbjct: 26760342 cttcacttttgccacacaggctggatctttctttccataattttc 26760386
>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative myb-related protein, putative farnesyl pyrophosphate synthase, and hypothetical protein genes, complete cds Length = 43422 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagcttt 432 ||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||||| | Sbjct: 34316 ctacttctgtctcttgtagatcttgtgcaagaaggacttcagaacattctgaacagctat 34257 Query: 433 gcttggctgggc 444 |||||||||||| Sbjct: 34256 gcttggctgggc 34245 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 577 tagaatgcgcttttggctctcatctgcatggtcaagagcttgcacaactaaccaggaaca 636 ||||| || |||||| |||||||| ||| | ||||| ||||||||||||| ||| || || Sbjct: 33816 tagaacgctcttttgactctcatcagcacgctcaagggcttgcacaactagccaagagca 33757 Query: 637 cttgtagtcttca 649 ||||| |||||| Sbjct: 33756 tttgtaatcttca 33744 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 529 cttcacttttgcaacagactctggatctgactttccataattttc 573 |||||||||||| ||| | |||||||| ||||||||||||||| Sbjct: 33934 cttcacttttgccacacaggctggatctttctttccataattttc 33890
>ref|NM_192180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 506 agatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcca 565 |||| |||||| ||||| |||||||||||||| |||||| | |||||||||| || ||| Sbjct: 923 agatgaagttcgttatatagatccttcactttggcaacacaagctggatctgatttccca 864 Query: 566 taattttcaa 575 |||||||||| Sbjct: 863 taattttcaa 854
>dbj|AK099451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022H18, full insert sequence Length = 1079 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 506 agatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcca 565 |||| |||||| ||||| |||||||||||||| |||||| | |||||||||| || ||| Sbjct: 792 agatgaagttcgttatatagatccttcactttggcaacacaagctggatctgatttccca 733 Query: 566 taattttcaa 575 |||||||||| Sbjct: 732 taattttcaa 723
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 506 agatcaagttctttatacagatccttcacttttgcaacagactctggatctgactttcca 565 |||| |||||| ||||| |||||||||||||| |||||| | |||||||||| || ||| Sbjct: 129121 agatgaagttcgttatatagatccttcactttggcaacacaagctggatctgatttccca 129180 Query: 566 taattttc 573 |||||||| Sbjct: 129181 taattttc 129188
>gb|AF470318.1| Musa acuminata farnesyl pyrophosphare synthase (FPPS) mRNA, complete cds Length = 1269 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 377 ttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagctttgctt 436 |||| ||||||||||||||||| || ||| ||| ||| || |||||| ||||||||| Sbjct: 1099 ttctccctcttgtagatcttctgcaggaaagacttcagtacaccctgaactgctttgctt 1040 Query: 437 ggctgggcctcaat 450 |||||||||||||| Sbjct: 1039 ggctgggcctcaat 1026
>ref|NM_124151.2| Arabidopsis thaliana FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase AT5G47770 (FPS1) mRNA, complete cds Length = 1493 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1279 ctacttctgcctcttgtagatcttagccaagaagga 1244
>emb|X75789.1|ATFPS A.thaliana mRNA for farnesyl pyrophosphate synthetase Length = 1224 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1093 ctacttctgcctcttgtagatcttagccaagaagga 1058
>gb|AY063112.1| Arabidopsis thaliana putative farnesyl diphosphate synthase precursor (At5g47770) mRNA, complete cds Length = 1186 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1155 ctacttctgcctcttgtagatcttagccaagaagga 1120
>gb|AF370324.1| Arabidopsis thaliana putative farnesyl diphosphate synthase precursor (At5g47770) mRNA, complete cds Length = 1475 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1279 ctacttctgcctcttgtagatcttagccaagaagga 1244
>emb|BX833933.1|CNS0A1UV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1242 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1068 ctacttctgcctcttgtagatcttagccaagaagga 1033
>emb|BX830785.1|CNS0A1WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1262 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1064 ctacttctgcctcttgtagatcttagccaagaagga 1029
>emb|BX830585.1|CNS0A1Z7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1422 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1247 ctacttctgcctcttgtagatcttagccaagaagga 1212
>gb|L46367.2|ATHFPS1G Arabidopsis thaliana farnesyl diphosphate synthase (FPS1) gene, alternative products, complete cds Length = 3883 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 3527 ctacttctgcctcttgtagatcttagccaagaagga 3492
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 24648 ctacttctgcctcttgtagatcttagccaagaagga 24613
>gb|U80605.1|ATU80605 Arabidopsis thaliana farnesyl diphosphate synthase precursor (FPS1) mRNA, complete cds Length = 1396 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaagga 408 |||||||||||||||||||||||| |||||||||| Sbjct: 1182 ctacttctgcctcttgtagatcttagccaagaagga 1147
>ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.2 mRNA, complete cds Length = 1291 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 1091 ctctacttctgcctcttgtagatcttagccaagaa 1057
>ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.1 mRNA, complete cds Length = 1278 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 1078 ctctacttctgcctcttgtagatcttagccaagaa 1044
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 13511 ctctacttctgcctcttgtagatcttagccaagaa 13545
>gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1060 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 1031 ctctacttctgcctcttgtagatcttagccaagaa 997
>gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1292 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 1077 ctctacttctgcctcttgtagatcttagccaagaa 1043
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 2876 ctctacttctgcctcttgtagatcttagccaagaa 2910
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45 Length = 199548 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 197424 ctctacttctgcctcttgtagatcttagccaagaa 197458
>emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1198 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 1038 ctctacttctgcctcttgtagatcttagccaagaa 1004
>emb|BX826432.1|CNS0A41B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 776 ctctacttctgcctcttgtagatcttagccaagaa 742
>gb|L46350.2|ATHFPS2G Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) gene, complete cds Length = 4025 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 3502 ctctacttctgcctcttgtagatcttagccaagaa 3468
>gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA, complete cds Length = 1266 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgtagatcttctccaagaa 405 |||||||||||||||||||||||||| ||||||| Sbjct: 1077 ctctacttctgcctcttgtagatcttagccaagaa 1043
>emb|X82542.1|PAFPS1 P.argentatum mRNA for farnesyl diphosphate synthase (FPS1) Length = 1283 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 614 gcttgcacaactaaccaggaacacttgtagtcttca 649 |||| ||||||||||||||||||||| |||||||| Sbjct: 841 gctttcacaactaaccaggaacacttaaagtcttca 806
>gb|AF268889.1|AF268889 Humulus lupulus farnesyl pyrophosphate synthase mRNA, complete cds Length = 1241 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 374 tacttctgcctcttgtagatcttctccaagaa 405 ||||||||||||||||||||||| ||||||| Sbjct: 1033 tacttctgcctcttgtagatcttagccaagaa 1002
>gb|AY461811.1| Taxus x media farnesyl diphosphate synthase mRNA, complete cds Length = 1464 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 375 acttctgcctcttgtagatcttctccaagaaggacatcaa 414 ||||||| | |||||| |||||||||||||||||| |||| Sbjct: 1148 acttctggcgcttgtatatcttctccaagaaggacttcaa 1109
>dbj|AB053487.1| Humulus lupulus fpps mRNA for farnesyl pyrophophate synthase, complete cds Length = 1029 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 374 tacttctgcctcttgtagatcttctccaagaa 405 ||||||||||||||||||||||| ||||||| Sbjct: 1028 tacttctgcctcttgtagatcttagccaagaa 997
>dbj|AB053486.1| Humulus lupulus fpps gene for farnesyl pyrophosphate synthase, complete cds Length = 4698 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 374 tacttctgcctcttgtagatcttctccaagaa 405 ||||||||||||||||||||||| ||||||| Sbjct: 4537 tacttctgcctcttgtagatcttagccaagaa 4506
>emb|Y12072.1|CAFPS1 G.arboreum mRNA for farnesyl pyrophosphate synthase Length = 1286 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 372 tctacttctgcctcttgtagatcttctccaagaaggacatcaa 414 |||| ||||||||||||||||||||| | ||||| ||| |||| Sbjct: 1124 tctatttctgcctcttgtagatcttccctaagaatgacttcaa 1082
>gb|AY083165.1| Malus x domestica farnesyl pyrophosphate synthase (FPPS) mRNA, complete cds Length = 1401 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 372 tctacttctgcctcttgtagatcttctccaagaaggacatcaaaactttctgaacagctt 431 |||| |||||||||||||| ||||| ||||||||||| |||| ||| || || |||| Sbjct: 1172 tctatttctgcctcttgtaaatcttgcccaagaaggacttcaacactgattgcaccgctt 1113 Query: 432 tgcttgg 438 ||||||| Sbjct: 1112 tgcttgg 1106
>ref|XM_474182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 ccaggaacacttgtagtcttca 649 |||||||||||||||||||||| Sbjct: 969 ccaggaacacttgtagtcttca 948
>gb|BC106510.1| Xenopus laevis cDNA clone MGC:131256 IMAGE:7393406, complete cds Length = 1455 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 acttctgcctcttgtagatctt 396 |||||||||||||||||||||| Sbjct: 1181 acttctgcctcttgtagatctt 1160
>gb|BC068912.1| Xenopus laevis hypothetical protein MGC83119, mRNA (cDNA clone MGC:83119 IMAGE:6318056), complete cds Length = 1268 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 acttctgcctcttgtagatctt 396 |||||||||||||||||||||| Sbjct: 1083 acttctgcctcttgtagatctt 1062
>ref|NM_001015867.1| Xenopus tropicalis MGC108224 protein (MGC108224), mRNA Length = 2147 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 acttctgcctcttgtagatctt 396 |||||||||||||||||||||| Sbjct: 1124 acttctgcctcttgtagatctt 1103
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 628 ccaggaacacttgtagtcttca 649 |||||||||||||||||||||| Sbjct: 33559459 ccaggaacacttgtagtcttca 33559480 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 atccaaacagggccaaaatat 262 ||||||||||||||||||||| Sbjct: 973397 atccaaacagggccaaaatat 973377
>gb|BC090384.1| Xenopus tropicalis MGC108224 protein, mRNA (cDNA clone MGC:108224 IMAGE:7016997), complete cds Length = 2147 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 375 acttctgcctcttgtagatctt 396 |||||||||||||||||||||| Sbjct: 1124 acttctgcctcttgtagatctt 1103
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 628 ccaggaacacttgtagtcttca 649 |||||||||||||||||||||| Sbjct: 135748 ccaggaacacttgtagtcttca 135769
>gb|AY787627.1| Centella asiatica farnesyl diphosphate synthase (FPS) mRNA, complete cds Length = 1340 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 373 ctacttctgcctcttgtagatcttctccaagaa 405 |||||| ||||||||||| |||||| ||||||| Sbjct: 1092 ctacttttgcctcttgtatatcttccccaagaa 1060
>gb|AC147243.2| Mus musculus BAC clone RP23-444P22 from chromosome 6, complete sequence Length = 181025 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 212 tttacaagtgtatttgaaagagaat 236 ||||||||||||||||||| ||||| Sbjct: 144292 tttacaagtgtatttgaaatagaat 144268
>gb|AC140275.3| Mus musculus BAC clone RP24-312F4 from chromosome 19, complete sequence Length = 173022 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctaatttgtccacaagcttag 370 ||||||||||||||||||||| Sbjct: 94113 ctaatttgtccacaagcttag 94093
>gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome 6, complete sequence Length = 167991 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 212 tttacaagtgtatttgaaagagaat 236 ||||||||||||||||||| ||||| Sbjct: 15147 tttacaagtgtatttgaaatagaat 15123
>gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, complete sequence Length = 228363 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctaatttgtccacaagcttag 370 ||||||||||||||||||||| Sbjct: 137933 ctaatttgtccacaagcttag 137953
>gb|AY308477.1| Artemisia tridentata subsp. spiciformis farnesyl diphosphate synthase (FDS-1) mRNA, complete cds Length = 1378 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 372 tctacttctgcctcttgtagatcttctccaagaagga 408 ||||||| |||||||||||||| || |||||||||| Sbjct: 1112 tctacttttgcctcttgtagattttacccaagaagga 1076
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 atccaaacagggccaaaatat 262 ||||||||||||||||||||| Sbjct: 53116 atccaaacagggccaaaatat 53096
>emb|BX927069.11| Zebrafish DNA sequence from clone DKEY-24C22 in linkage group 23, complete sequence Length = 162588 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tattttttacaagtgtatttg 227 ||||||||||||||||||||| Sbjct: 11461 tattttttacaagtgtatttg 11441
>emb|CR394554.6| Zebrafish DNA sequence from clone CH211-113B13 in linkage group 25, complete sequence Length = 168993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 aataccatgatgtactgtaca 300 ||||||||||||||||||||| Sbjct: 13917 aataccatgatgtactgtaca 13937
>emb|CR354598.7| Zebrafish DNA sequence from clone CH211-198K18 in linkage group 6, complete sequence Length = 190437 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 aataccatgatgtactgtaca 300 ||||||||||||||||||||| Sbjct: 185831 aataccatgatgtactgtaca 185851
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 aaatgttacaagagttgcagaaaaacaac 77 ||||||||||||||||| |||| |||||| Sbjct: 7298252 aaatgttacaagagttgtagaacaacaac 7298224
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 aaatgttacaagagttgcagaaaaacaac 77 ||||||||||||||||| |||| |||||| Sbjct: 24933 aaatgttacaagagttgtagaacaacaac 24905
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 aaatgttacaagagttgcagaaaaacaac 77 ||||||||||||||||| |||| |||||| Sbjct: 138736 aaatgttacaagagttgtagaacaacaac 138708
>emb|BX321890.5| Zebrafish DNA sequence from clone CH211-258D5 in linkage group 5, complete sequence Length = 147231 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aaaatgttacaagagtaatac 41 ||||||||||||||||||||| Sbjct: 101760 aaaatgttacaagagtaatac 101740
>dbj|AK064965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B01, full insert sequence Length = 1810 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 atccaaacagggccaaaatat 262 ||||||||||||||||||||| Sbjct: 1042 atccaaacagggccaaaatat 1022
>emb|AL773598.5| Zebrafish DNA sequence from clone CH211-207G4, complete sequence Length = 209875 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 280 aataccatgatgtactgtaca 300 ||||||||||||||||||||| Sbjct: 109185 aataccatgatgtactgtaca 109165
>gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete sequence Length = 166908 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aaactttctgaacagctttg 433 |||||||||||||||||||| Sbjct: 47799 aaactttctgaacagctttg 47780
>gb|AE013121.1| Thermoanaerobacter tengcongensis MB4, section 148 of 244 of the complete genome Length = 12232 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tattttttacaagtgtattt 226 |||||||||||||||||||| Sbjct: 1160 tattttttacaagtgtattt 1179
>emb|BX294177.35| Zebrafish DNA sequence from clone CH211-281O13 in linkage group 12, complete sequence Length = 136080 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tggaaggaataataccatga 289 |||||||||||||||||||| Sbjct: 135506 tggaaggaataataccatga 135525
>emb|AL928724.10| Zebrafish DNA sequence from clone CH211-51K14 in linkage group 15, complete sequence Length = 165299 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 agttgcagaaaaacaacatt 80 |||||||||||||||||||| Sbjct: 154844 agttgcagaaaaacaacatt 154863
>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete sequence Length = 197211 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tttttacaagtgtatttgaa 229 |||||||||||||||||||| Sbjct: 86941 tttttacaagtgtatttgaa 86960
>emb|CR651655.2|CNS0F1SD Tetraodon nigroviridis full-length cDNA Length = 1254 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 agtaatacatgggtaaaatg 53 |||||||||||||||||||| Sbjct: 1209 agtaatacatgggtaaaatg 1190
>emb|CR635603.1|CNS0EPEH Tetraodon nigroviridis full-length cDNA Length = 1277 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 agtaatacatgggtaaaatg 53 |||||||||||||||||||| Sbjct: 1216 agtaatacatgggtaaaatg 1197
>gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosome 3, complete sequence Length = 205852 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tacaagagtaatacatgggt 47 |||||||||||||||||||| Sbjct: 110588 tacaagagtaatacatgggt 110569
>emb|AL356054.25| Human DNA sequence from clone RP11-50C21 on chromosome 9, complete sequence Length = 37170 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agtgtatttgaaagagaatt 237 |||||||||||||||||||| Sbjct: 1836 agtgtatttgaaagagaatt 1817
>emb|AL353743.22| Human DNA sequence from clone RP11-213G2 on chromosome 9 Contains the 3' end of a pseudogene similar to part of a novel protein (DKFZp434D0917), a pseudogene similar to part of a novel protein (DKFZp434D0917), a novel gene, a prohibitin pseudogene (PHB), a novel pseudogene (DFKZP564M182), the 5' end of a novel gene (FLJ21613) similar to rat corneal wound healing related protein (includes FLJ22634) and two CpG islands, complete sequence Length = 181864 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 caagtgtatttgaaagagaa 235 |||||||||||||||||||| Sbjct: 43949 caagtgtatttgaaagagaa 43968
>emb|AL138919.12| Human DNA sequence from clone RP3-492L20 on chromosome 6, complete sequence Length = 72535 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgcttggattgaatgtattt 120 |||||||||||||||||||| Sbjct: 39836 tgcttggattgaatgtattt 39817
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 agtgtatttgaaagagaatt 237 |||||||||||||||||||| Sbjct: 171688 agtgtatttgaaagagaatt 171669
>emb|AL121723.36|HSJ854E16 Human DNA sequence from clone RP5-854E16 on chromosome 20 Contains a DKKL1-pending (soggy-1) (SGY-1) pseudogene and part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, complete sequence Length = 70452 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 aggacatcaaaactttctga 424 |||||||||||||||||||| Sbjct: 52628 aggacatcaaaactttctga 52647
>emb|AL121963.10|HSJ136O14 Human DNA sequence from clone RP1-136O14 on chromosome 6q21-22.3 Contains a pseudogene similar to various (hypothetical) genes, the COL10A1 gene for collagen, type X, alpha 1 (Schmid metaphyseal chondrodysplasia) (collagen X, alpha-1 polypeptide; collagen, type X, alpha 1 (Schmid metaphyseal chondrodysplasia)), the 5' end of a novel gene and the 5' end of the FRK gene for fyn-related kinase (GTK, RAK). Contains a CpG island, complete sequence Length = 107553 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 tgtattttttacaagtgtatttga 228 |||||||||| ||||||||||||| Sbjct: 55315 tgtattttttccaagtgtatttga 55292
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agaaaaacaacattccaaac 86 |||||||||||||||||||| Sbjct: 867582 agaaaaacaacattccaaac 867563
>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project) Length = 96379 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tctagaaattccacccagaa 183 |||||||||||||||||||| Sbjct: 46055 tctagaaattccacccagaa 46074
>gb|AC104952.8| Homo sapiens chromosome 8, clone RP11-141J23, complete sequence Length = 190902 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 tagaacaagttactaatttgtcca 361 ||||||||||||||||||| |||| Sbjct: 116481 tagaacaagttactaatttctcca 116458
>dbj|AK141100.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230051P06 product:unclassifiable, full insert sequence Length = 5880 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ataccatgatgtactgtaca 300 |||||||||||||||||||| Sbjct: 1795 ataccatgatgtactgtaca 1776
>gb|AC018442.8| Homo sapiens chromosome 8, clone RP11-402L5, complete sequence Length = 192545 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcaaaactttctgaacagct 430 |||||||||||||||||||| Sbjct: 46689 tcaaaactttctgaacagct 46670
>gb|AC018943.10| Homo sapiens, clone RP11-24D15, complete sequence Length = 152779 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 atcaagttctttatacagat 527 |||||||||||||||||||| Sbjct: 26881 atcaagttctttatacagat 26862
>gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosome 14, complete sequence Length = 150383 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 ctgcatggtcaagagcttgc 619 |||||||||||||||||||| Sbjct: 23377 ctgcatggtcaagagcttgc 23358
>gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome 16, complete sequence Length = 212696 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tttttacaagtgtatttgaa 229 |||||||||||||||||||| Sbjct: 128599 tttttacaagtgtatttgaa 128580
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agaaaaacaacattccaaac 86 |||||||||||||||||||| Sbjct: 930938 agaaaaacaacattccaaac 930919
>emb|AL929298.8| Zebrafish DNA sequence from clone CH211-79E7, complete sequence Length = 178487 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tactgtacagtactgaaata 311 |||||||||||||||||||| Sbjct: 7824 tactgtacagtactgaaata 7843
>emb|BX571948.8| Zebrafish DNA sequence from clone DKEY-185P13 in linkage group 22, complete sequence Length = 184751 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tactgtacagtactgaaata 311 |||||||||||||||||||| Sbjct: 33367 tactgtacagtactgaaata 33348
>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14 Length = 82890 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ctacttctgcctcttgtagatctt 396 ||||||| |||||||||||||||| Sbjct: 14588 ctacttcagcctcttgtagatctt 14611
>emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in linkage group 3, complete sequence Length = 247387 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tattttttacaagtgtattt 226 |||||||||||||||||||| Sbjct: 191926 tattttttacaagtgtattt 191907
>emb|AL928944.8| Zebrafish DNA sequence from clone DKEYP-2H4 in linkage group 8, complete sequence Length = 55565 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tattttttacaagtgtattt 226 |||||||||||||||||||| Sbjct: 5901 tattttttacaagtgtattt 5920
>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the complete sequence Length = 283558 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aaactttctgaacagctttg 433 |||||||||||||||||||| Sbjct: 144031 aaactttctgaacagctttg 144012
>dbj|AP005625.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1905B11, complete sequence Length = 184137 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcaaaactttctgaacagct 430 |||||||||||||||||||| Sbjct: 175836 tcaaaactttctgaacagct 175817
>dbj|AP006182.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB467B4, complete sequence Length = 123502 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcaaaactttctgaacagct 430 |||||||||||||||||||| Sbjct: 61418 tcaaaactttctgaacagct 61399
>dbj|AP001573.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1915D9 Length = 155174 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcaaaactttctgaacagct 430 |||||||||||||||||||| Sbjct: 23361 tcaaaactttctgaacagct 23342
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 atatttactgttggaaggaa 278 |||||||||||||||||||| Sbjct: 26411 atatttactgttggaaggaa 26430
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 atgtactgtacagtactgaa 308 |||||||||||||||||||| Sbjct: 1098579 atgtactgtacagtactgaa 1098598
>gb|U20771.1|LAU20771 Lupinus albus farnesyl pyrophosphate synthase (fps1) mRNA, complete cds Length = 1320 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctctacttctgcctcttgta 390 |||||||||||||||||||| Sbjct: 1088 ctctacttctgcctcttgta 1069
>gb|AY162472.1| Eucommia ulmoides farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 517 tttatacagatccttcacttttgcaacagactctgg 552 |||||| |||||||||||| | |||||||| ||||| Sbjct: 966 tttataaagatccttcactctagcaacagattctgg 931
>dbj|AB052681.1| Eucommia ulmoides EUFPS2 mRNA for putative FPP synthase 2, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 377 ttctgcctcttgtagatcttctccaagaagga 408 |||||||||| ||||||||||||||| |||| Sbjct: 1147 ttctgcctctgatagatcttctccaaggagga 1116
>dbj|AB052680.1| Eucommia ulmoides EUFPS1 mRNA for putative FPP synthase 1, complete cds Length = 1264 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 517 tttatacagatccttcacttttgcaacagactctgg 552 |||||| |||||||||||| | |||||||| ||||| Sbjct: 973 tttataaagatccttcactctagcaacagattctgg 938
>dbj|AB041626.2| Eucommia ulmoides EUFPPS1 mRNA for putative FPP synthase 1, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 517 tttatacagatccttcacttttgcaacagactctgg 552 |||||| |||||||||||| | |||||||| ||||| Sbjct: 977 tttataaagatccttcactctagcaacagattctgg 942 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,677,642 Number of Sequences: 3902068 Number of extensions: 6677642 Number of successful extensions: 143821 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 143215 Number of HSP's gapped (non-prelim): 600 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)