ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468660.1| Oryza sativa (japonica cultivar-group), mRNA 262 8e-67
2gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome... 262 8e-67
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 262 8e-67
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 262 8e-67
5dbj|AK067510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 8e-67
6gb|AY107084.1| Zea mays PCO079799 mRNA sequence 60 6e-06
7emb|AJ132346.1|DBI132346 Dunaliella bioculata mRNA for plastidic... 48 0.022
8ref|XM_477654.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.35
9gb|AY339367.1| Oryza sativa (japonica cultivar-group) putative p... 44 0.35
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
11dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
12dbj|AK064867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
13ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
14gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 5.4
15gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.4
16gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.4
17emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chr... 40 5.4
18emb|X80045.1|OAACOAC O.aries mRNA for acetyl-CoA carboxylase 40 5.4
19emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.4
20emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.4
21emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.4
22emb|AJ132890.1|BTA132890 Bos taurus mRNA for acetyl-CoA-carboxylase 40 5.4
23gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 5.4
24gb|DQ370054.1| Capra hircus acetyl coenzyme A carboxylase alpha ... 40 5.4
25gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 5.4
26dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
27ref|NM_174224.2| Bos taurus acetyl-coenzyme A carboxylase alpha ... 40 5.4
28ref|NM_001009256.1| Ovis aries acetyl-CoA carboxylase (ACC), mRNA 40 5.4
29gb|AE004693.1| Pseudomonas aeruginosa PAO1, section 254 of 529 o... 40 5.4
30dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
31dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
32gb|AF173650.1|AF173650 Beta vulgaris clone GPD109UNI glucose-6-p... 40 5.4
33gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.4 
>ref|XM_468660.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1981

 Score =  262 bits (132), Expect = 8e-67
 Identities = 271/316 (85%), Gaps = 1/316 (0%)
 Strand = Plus / Minus

                                                                        
Query: 92   atgtccccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccgg 151
            ||||| ||||| | |||||||| ||||||||||||||||||||| ||||| || ||||||
Sbjct: 1832 atgtcaccccagcggacgttgtggttggcggcgaggtagtgcgctccgacgggtccccgg 1773

                                                                        
Query: 152  ctgccgtacgggtagagctcgggcgccaccctcttgtcctcgagctccctgagcacgggc 211
            ||||||||||||||||||||||| |||||| | ||| ||||||| ||   ||| ||||| 
Sbjct: 1772 ctgccgtacgggtagagctcgggtgccaccttgttggcctcgaggtcggcgaggacgggg 1713

                                                                        
Query: 212  gtgaagatggcccaggccgcgtcgagctcgtcgctccggatgaagagccggcgctccccc 271
            ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 1712 gtgaagatggcccaggcggcgtcgagctcgtcgctgcggatgaagaggcggcgctcgccc 1653

                                                                        
Query: 272  ttcatggcgtccaggaggagccgctcgtacgcgttcggtatctcccgctggtacctctcg 331
            |  |||||||| || || || |||||||| ||||  || |||||     |||| | ||||
Sbjct: 1652 tcgatggcgtcgagcagcaggcgctcgtaggcgtcggggatctcggcggggtagcgctcg 1593

                                                                        
Query: 332  gagtagaagaggttgaggttgcctgctgtcgagcctcatcccgagcccgggcaccttgtt 391
            |||||||  |||||||||| | |||||||| ||||||||||| ||||||||||||||| |
Sbjct: 1592 gagtagagcaggttgaggtcg-ctgctgtccagcctcatccccagcccgggcaccttgct 1534

                            
Query: 392  gttgatcttgaggtag 407
            ||||||||||||||||
Sbjct: 1533 gttgatcttgaggtag 1518
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>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039N21, complete sequence
          Length = 151732

 Score =  262 bits (132), Expect = 8e-67
 Identities = 271/316 (85%), Gaps = 1/316 (0%)
 Strand = Plus / Minus

                                                                         
Query: 92    atgtccccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccgg 151
             ||||| ||||| | |||||||| ||||||||||||||||||||| ||||| || ||||||
Sbjct: 27361 atgtcaccccagcggacgttgtggttggcggcgaggtagtgcgctccgacgggtccccgg 27302

                                                                         
Query: 152   ctgccgtacgggtagagctcgggcgccaccctcttgtcctcgagctccctgagcacgggc 211
             ||||||||||||||||||||||| |||||| | ||| ||||||| ||   ||| ||||| 
Sbjct: 27301 ctgccgtacgggtagagctcgggtgccaccttgttggcctcgaggtcggcgaggacgggg 27242

                                                                         
Query: 212   gtgaagatggcccaggccgcgtcgagctcgtcgctccggatgaagagccggcgctccccc 271
             ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 27241 gtgaagatggcccaggcggcgtcgagctcgtcgctgcggatgaagaggcggcgctcgccc 27182

                                                                         
Query: 272   ttcatggcgtccaggaggagccgctcgtacgcgttcggtatctcccgctggtacctctcg 331
             |  |||||||| || || || |||||||| ||||  || |||||     |||| | ||||
Sbjct: 27181 tcgatggcgtcgagcagcaggcgctcgtaggcgtcggggatctcggcggggtagcgctcg 27122

                                                                         
Query: 332   gagtagaagaggttgaggttgcctgctgtcgagcctcatcccgagcccgggcaccttgtt 391
             |||||||  |||||||||| | |||||||| ||||||||||| ||||||||||||||| |
Sbjct: 27121 gagtagagcaggttgaggtcg-ctgctgtccagcctcatccccagcccgggcaccttgct 27063

                             
Query: 392   gttgatcttgaggtag 407
             ||||||||||||||||
Sbjct: 27062 gttgatcttgaggtag 27047
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  262 bits (132), Expect = 8e-67
 Identities = 271/316 (85%), Gaps = 1/316 (0%)
 Strand = Plus / Minus

                                                                            
Query: 92       atgtccccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccgg 151
                ||||| ||||| | |||||||| ||||||||||||||||||||| ||||| || ||||||
Sbjct: 16884357 atgtcaccccagcggacgttgtggttggcggcgaggtagtgcgctccgacgggtccccgg 16884298

                                                                            
Query: 152      ctgccgtacgggtagagctcgggcgccaccctcttgtcctcgagctccctgagcacgggc 211
                ||||||||||||||||||||||| |||||| | ||| ||||||| ||   ||| ||||| 
Sbjct: 16884297 ctgccgtacgggtagagctcgggtgccaccttgttggcctcgaggtcggcgaggacgggg 16884238

                                                                            
Query: 212      gtgaagatggcccaggccgcgtcgagctcgtcgctccggatgaagagccggcgctccccc 271
                ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 16884237 gtgaagatggcccaggcggcgtcgagctcgtcgctgcggatgaagaggcggcgctcgccc 16884178

                                                                            
Query: 272      ttcatggcgtccaggaggagccgctcgtacgcgttcggtatctcccgctggtacctctcg 331
                |  |||||||| || || || |||||||| ||||  || |||||     |||| | ||||
Sbjct: 16884177 tcgatggcgtcgagcagcaggcgctcgtaggcgtcggggatctcggcggggtagcgctcg 16884118

                                                                            
Query: 332      gagtagaagaggttgaggttgcctgctgtcgagcctcatcccgagcccgggcaccttgtt 391
                |||||||  |||||||||| | |||||||| ||||||||||| ||||||||||||||| |
Sbjct: 16884117 gagtagagcaggttgaggtcg-ctgctgtccagcctcatccccagcccgggcaccttgct 16884059

                                
Query: 392      gttgatcttgaggtag 407
                ||||||||||||||||
Sbjct: 16884058 gttgatcttgaggtag 16884043
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  262 bits (132), Expect = 8e-67
 Identities = 271/316 (85%), Gaps = 1/316 (0%)
 Strand = Plus / Minus

                                                                            
Query: 92       atgtccccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccgg 151
                ||||| ||||| | |||||||| ||||||||||||||||||||| ||||| || ||||||
Sbjct: 16877930 atgtcaccccagcggacgttgtggttggcggcgaggtagtgcgctccgacgggtccccgg 16877871

                                                                            
Query: 152      ctgccgtacgggtagagctcgggcgccaccctcttgtcctcgagctccctgagcacgggc 211
                ||||||||||||||||||||||| |||||| | ||| ||||||| ||   ||| ||||| 
Sbjct: 16877870 ctgccgtacgggtagagctcgggtgccaccttgttggcctcgaggtcggcgaggacgggg 16877811

                                                                            
Query: 212      gtgaagatggcccaggccgcgtcgagctcgtcgctccggatgaagagccggcgctccccc 271
                ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 16877810 gtgaagatggcccaggcggcgtcgagctcgtcgctgcggatgaagaggcggcgctcgccc 16877751

                                                                            
Query: 272      ttcatggcgtccaggaggagccgctcgtacgcgttcggtatctcccgctggtacctctcg 331
                |  |||||||| || || || |||||||| ||||  || |||||     |||| | ||||
Sbjct: 16877750 tcgatggcgtcgagcagcaggcgctcgtaggcgtcggggatctcggcggggtagcgctcg 16877691

                                                                            
Query: 332      gagtagaagaggttgaggttgcctgctgtcgagcctcatcccgagcccgggcaccttgtt 391
                |||||||  |||||||||| | |||||||| ||||||||||| ||||||||||||||| |
Sbjct: 16877690 gagtagagcaggttgaggtcg-ctgctgtccagcctcatccccagcccgggcaccttgct 16877632

                                
Query: 392      gttgatcttgaggtag 407
                ||||||||||||||||
Sbjct: 16877631 gttgatcttgaggtag 16877616
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>dbj|AK067510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109K05, full
            insert sequence
          Length = 1874

 Score =  262 bits (132), Expect = 8e-67
 Identities = 271/316 (85%), Gaps = 1/316 (0%)
 Strand = Plus / Minus

                                                                        
Query: 92   atgtccccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccgg 151
            ||||| ||||| | |||||||| ||||||||||||||||||||| ||||| || ||||||
Sbjct: 1735 atgtcaccccagcggacgttgtggttggcggcgaggtagtgcgctccgacgggtccccgg 1676

                                                                        
Query: 152  ctgccgtacgggtagagctcgggcgccaccctcttgtcctcgagctccctgagcacgggc 211
            ||||||||||||||||||||||| |||||| | ||| ||||||| ||   ||| ||||| 
Sbjct: 1675 ctgccgtacgggtagagctcgggtgccaccttgttggcctcgaggtcggcgaggacgggg 1616

                                                                        
Query: 212  gtgaagatggcccaggccgcgtcgagctcgtcgctccggatgaagagccggcgctccccc 271
            ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 1615 gtgaagatggcccaggcggcgtcgagctcgtcgctgcggatgaagaggcggcgctcgccc 1556

                                                                        
Query: 272  ttcatggcgtccaggaggagccgctcgtacgcgttcggtatctcccgctggtacctctcg 331
            |  |||||||| || || || |||||||| ||||  || |||||     |||| | ||||
Sbjct: 1555 tcgatggcgtcgagcagcaggcgctcgtaggcgtcggggatctcggcggggtagcgctcg 1496

                                                                        
Query: 332  gagtagaagaggttgaggttgcctgctgtcgagcctcatcccgagcccgggcaccttgtt 391
            |||||||  |||||||||| | |||||||| ||||||||||| ||||||||||||||| |
Sbjct: 1495 gagtagagcaggttgaggtcg-ctgctgtccagcctcatccccagcccgggcaccttgct 1437

                            
Query: 392  gttgatcttgaggtag 407
            ||||||||||||||||
Sbjct: 1436 gttgatcttgaggtag 1421
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>gb|AY107084.1| Zea mays PCO079799 mRNA sequence
          Length = 2167

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 98   ccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccggctgccg 157
            ||||| || |||||||| ||||||||||| ||||| || |||||||| || ||||| || 
Sbjct: 1834 ccccatcttacgttgtacttggcggcgagatagtgagccccgacaggtccacggcttcca 1775

                          
Query: 158  tacgggtagagctc 171
            || |||||||||||
Sbjct: 1774 tatgggtagagctc 1761
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>emb|AJ132346.1|DBI132346 Dunaliella bioculata mRNA for plastidic glucose-6-phosphate
            dehydrogenase
          Length = 1924

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 384  accttgttgttgatcttgaggtag 407
            ||||||||||||||||||||||||
Sbjct: 1530 accttgttgttgatcttgaggtag 1507
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>ref|XM_477654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2074

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 98   ccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccggctgccg 157
            ||||| ||||||||||| || || || |||||||| || || |||||||| ||||| || 
Sbjct: 1876 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 1817

                          
Query: 158  tacgggtagagctc 171
            || ||||| |||||
Sbjct: 1816 taagggtatagctc 1803
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>gb|AY339367.1| Oryza sativa (japonica cultivar-group) putative plastidic
            glucose-6-phosphate dehydrogenase (pG6PDH) mRNA, complete
            cds; nuclear gene for plastid product
          Length = 1768

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 98   ccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccggctgccg 157
            ||||| ||||||||||| || || || |||||||| || || |||||||| ||||| || 
Sbjct: 1740 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 1681

                          
Query: 158  tacgggtagagctc 171
            || ||||| |||||
Sbjct: 1680 taagggtatagctc 1667
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                            
Query: 98       ccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccggctgccg 157
                ||||| ||||||||||| || || || |||||||| || || |||||||| ||||| || 
Sbjct: 12490968 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 12491027

                              
Query: 158      tacgggtagagctc 171
                || ||||| |||||
Sbjct: 12491028 taagggtatagctc 12491041
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>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0613B07
          Length = 191756

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                          
Query: 98     ccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccggctgccg 157
              ||||| ||||||||||| || || || |||||||| || || |||||||| ||||| || 
Sbjct: 135250 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 135309

                            
Query: 158    tacgggtagagctc 171
              || ||||| |||||
Sbjct: 135310 taagggtatagctc 135323
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>dbj|AK064867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I19, full
            insert sequence
          Length = 2074

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 98   ccccacctgacgttgtagttggcggcgaggtagtgcgcgccgacaggaccccggctgccg 157
            ||||| ||||||||||| || || || |||||||| || || |||||||| ||||| || 
Sbjct: 1876 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 1817

                          
Query: 158  tacgggtagagctc 171
            || ||||| |||||
Sbjct: 1816 taagggtatagctc 1803
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>ref|XM_483068.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1467

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 cggcgaggtagtgcgcgccg 139
           ||||||||||||||||||||
Sbjct: 526 cggcgaggtagtgcgcgccg 507
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    aggccgcgtcgagctcgtcg 244
              ||||||||||||||||||||
Sbjct: 127441 aggccgcgtcgagctcgtcg 127460
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 231     cgtcgagctcgtcgctccggatga 254
               |||||||||||||||||| |||||
Sbjct: 1337367 cgtcgagctcgtcgctccagatga 1337390
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    aggccgcgtcgagctcgtcg 244
              ||||||||||||||||||||
Sbjct: 350506 aggccgcgtcgagctcgtcg 350525
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>emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chromosome 9 Contains a
             gene for a novel protein (MGC35463), complete sequence
          Length = 107891

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   cttcatggcgtccaggagga 290
             ||||||||||||||||||||
Sbjct: 91528 cttcatggcgtccaggagga 91509
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>emb|X80045.1|OAACOAC O.aries mRNA for acetyl-CoA carboxylase
          Length = 9422

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 274  catggcgtccaggaggagccgctc 297
            |||||| |||||||||||||||||
Sbjct: 4681 catggcttccaggaggagccgctc 4658
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    cgtcgagctcgtcgctccggatga 254
              |||||||||||||||||| |||||
Sbjct: 304093 cgtcgagctcgtcgctccagatga 304116
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     aggccgcgtcgagctcgtcg 244
               ||||||||||||||||||||
Sbjct: 1669678 aggccgcgtcgagctcgtcg 1669697
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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             5/14
          Length = 299450

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 231   cgtcgagctcgtcgctccggatga 254
             |||||||||||||||||| |||||
Sbjct: 24530 cgtcgagctcgtcgctccagatga 24553
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>emb|AJ132890.1|BTA132890 Bos taurus mRNA for acetyl-CoA-carboxylase
          Length = 7381

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 274  catggcgtccaggaggagccgctc 297
            |||||| |||||||||||||||||
Sbjct: 4702 catggcttccaggaggagccgctc 4679
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 207    cgggcgtgaagatggcccaggccg 230
              |||||||||||| |||||||||||
Sbjct: 231024 cgggcgtgaagaaggcccaggccg 231001
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>gb|DQ370054.1| Capra hircus acetyl coenzyme A carboxylase alpha (ACACA) mRNA,
            partial cds
          Length = 5499

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 274  catggcgtccaggaggagccgctc 297
            |||||| |||||||||||||||||
Sbjct: 4279 catggcttccaggaggagccgctc 4256
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     aggccgcgtcgagctcgtcg 244
               ||||||||||||||||||||
Sbjct: 1120119 aggccgcgtcgagctcgtcg 1120138
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cggcgaggtagtgcgcgccg 139
                ||||||||||||||||||||
Sbjct: 24136513 cggcgaggtagtgcgcgccg 24136494
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>ref|NM_174224.2| Bos taurus acetyl-coenzyme A carboxylase alpha [acetyl-coA
            carboxylase] (ACACA), mRNA
          Length = 7381

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 274  catggcgtccaggaggagccgctc 297
            |||||| |||||||||||||||||
Sbjct: 4702 catggcttccaggaggagccgctc 4679
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>ref|NM_001009256.1| Ovis aries acetyl-CoA carboxylase (ACC), mRNA
          Length = 9422

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 274  catggcgtccaggaggagccgctc 297
            |||||| |||||||||||||||||
Sbjct: 4681 catggcttccaggaggagccgctc 4658
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>gb|AE004693.1| Pseudomonas aeruginosa PAO1, section 254 of 529 of the complete
            genome
          Length = 10188

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  tgaagatggcccaggccgcg 232
            ||||||||||||||||||||
Sbjct: 5379 tgaagatggcccaggccgcg 5360
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>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0605H02
          Length = 175547

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  cggcgaggtagtgcgcgccg 139
            ||||||||||||||||||||
Sbjct: 2852 cggcgaggtagtgcgcgccg 2833
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cggcgaggtagtgcgcgccg 139
             ||||||||||||||||||||
Sbjct: 89999 cggcgaggtagtgcgcgccg 89980
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>gb|AF173650.1|AF173650 Beta vulgaris clone GPD109UNI glucose-6-phosphate dehydrogenase
           (Gpd) gene, partial sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 366 ctcatcccgagcccgggcaccttgttgttgat 397
           |||||||| || ||||| ||||||||||||||
Sbjct: 606 ctcatcccaaggccgggaaccttgttgttgat 575
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     aggccgcgtcgagctcgtcg 244
               ||||||||||||||||||||
Sbjct: 1373707 aggccgcgtcgagctcgtcg 1373688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,119,923
Number of Sequences: 3902068
Number of extensions: 2119923
Number of successful extensions: 42558
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42161
Number of HSP's gapped (non-prelim): 392
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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