ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473364.1| Oryza sativa (japonica cultivar-group), predic... 270 4e-69
2dbj|AK121106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 4e-69
3emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4,... 170 3e-39
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
5gb|AY106242.1| Zea mays PCO146582 mRNA sequence 147 4e-32
6ref|XM_480136.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
7emb|AJ437338.1|OSA437338 Oryza sativa partial mRNA for putative ... 42 1.8
8emb|CR318673.9| Zebrafish DNA sequence from clone CH211-132J7 in... 42 1.8
9gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, comp... 42 1.8
10gb|AY396746.1| Foot-and-mouth disease virus - type SAT 1 isolate... 42 1.8
11gb|AY396745.1| Foot-and-mouth disease virus - type SAT 1 isolate... 42 1.8
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13gb|AF056511.1| Foot-and-mouth disease virus SAT 1 isolate SAR/9/... 42 1.8
14dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15dbj|AK065015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
16gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete... 42 1.8
17gb|AF038467.1|AF038467 Foot-and-mouth disease virus strain SAT-1... 42 1.8
18gb|AF038466.1|AF038466 Foot-and-mouth disease virus strain SAT-1... 42 1.8
19gb|AF038465.1|AF038465 Foot-and-mouth disease virus strain SAT-1... 42 1.8
20gb|AF038464.1|AF038464 Foot-and-mouth disease virus strain SAT-1... 42 1.8
21gb|AF038463.1|AF038463 Foot-and-mouth disease virus strain SAT-1... 42 1.8
22gb|AF038462.1|AF038462 Foot-and-mouth disease virus strain SAT-1... 42 1.8
23gb|AC135668.5| Mus musculus BAC clone RP23-280P7 from chromosome... 40 7.1
24gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Canc... 40 7.1
25ref|XM_958409.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.1
26ref|XM_325268.1| Neurospora crassa OR74A hypothetical protein ( ... 40 7.1
27gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome... 40 7.1
28emb|AL389901.1|NCB7F21 Neurospora crassa DNA linkage group II BA... 40 7.1
29gb|AC112654.2| Homo sapiens X BAC RP11-44F2 (Roswell Park Cancer... 40 7.1
30dbj|AK039410.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 7.1
31dbj|AK033606.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 7.1
32gb|AC024164.6|AC024164 Homo sapiens chromosome 3 clone RP11-350A... 40 7.1
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
34gb|AC007100.3| Homo sapiens BAC clone RP11-462D13 from 2, comple... 40 7.1
35gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K... 40 7.1
36gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y... 40 7.1
37ref|NM_172891.1| Mus musculus serine/threonine/tyrosine kinase 1... 40 7.1
38dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
39emb|AL513423.3|HS518K17 Homo sapiens chromosome 9 BAC RP11-518K1... 40 7.1
40gb|AC171070.2| Rhesus Macaque CHR5 BAC CH250-450H6 (Children's H... 40 7.1
41emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chro... 40 7.1
42gb|AC087589.3| Homo sapiens chromosome 3 clone RP11-1102N22 map ... 40 7.1
43emb|AL591222.2|HS378I6 Homo sapiens chromosome 9 BAC RP11-378I6,... 40 7.1 
>ref|XM_473364.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2247

 Score =  270 bits (136), Expect = 4e-69
 Identities = 297/351 (84%), Gaps = 6/351 (1%)
 Strand = Plus / Minus

                                                                        
Query: 179  ttgccggccaataagcctgcactgctccggtagcatggagcagacaacctgccccttgac 238
            |||||||||||||||| |||| |||||  ||| || ||||||||  || || ||||||||
Sbjct: 2229 ttgccggccaataagcatgcattgctcttgtaacagggagcagagtacatgtcccttgac 2170

                                                                        
Query: 239  gcggcagagctcgccgtctatcccacagccattgtgggtgtttgcaccaggtttaacctt 298
            |||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||||||| |||
Sbjct: 2169 gcggcaaagctcaccgtctattccacacccattgtgcgtgtttgcacctggtttaagctt 2110

                                                                        
Query: 299  gactgatttcaccttgacatattccacatagggcaaagaaagatggcggccaaattgcag 358
            ||| || || ||||| |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 2109 gacagactttaccttcacatattccacataaggcaaagaaagatggcgaccaaattgcag 2050

                                                                        
Query: 359  tagtatgaaaaatctcaacagcttccatctcccccttccaccaactaaaagtaagtccag 418
             |||||||||||| |||||| ||||||||| ||| ||||||||||||| || ||||||| 
Sbjct: 2049 aagtatgaaaaatttcaacaacttccatctaccctttccaccaactaagagcaagtccaa 1990

                                                                        
Query: 419  actgttatcgtcatggctcgcatttggagcaacaacctggg------aactttgaactgt 472
            | |||| || |||||| | || ||||| |||| |||||| |      ||||||| |||||
Sbjct: 1989 agtgttgtcatcatggttggcttttggtgcaataacctgcgaactcaaactttgcactgt 1930

                                                               
Query: 473  tttgcatgagtgattacatactaggacaccaagaaagtgccccttcctgac 523
             |||||||| ||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 1929 cttgcatgaatgattgcaaactagaacaccaagaaagtgtcctttcctgac 1879
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>dbj|AK121106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072I23, full
            insert sequence
          Length = 3100

 Score =  270 bits (136), Expect = 4e-69
 Identities = 297/351 (84%), Gaps = 6/351 (1%)
 Strand = Plus / Minus

                                                                        
Query: 179  ttgccggccaataagcctgcactgctccggtagcatggagcagacaacctgccccttgac 238
            |||||||||||||||| |||| |||||  ||| || ||||||||  || || ||||||||
Sbjct: 2855 ttgccggccaataagcatgcattgctcttgtaacagggagcagagtacatgtcccttgac 2796

                                                                        
Query: 239  gcggcagagctcgccgtctatcccacagccattgtgggtgtttgcaccaggtttaacctt 298
            |||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||||||| |||
Sbjct: 2795 gcggcaaagctcaccgtctattccacacccattgtgcgtgtttgcacctggtttaagctt 2736

                                                                        
Query: 299  gactgatttcaccttgacatattccacatagggcaaagaaagatggcggccaaattgcag 358
            ||| || || ||||| |||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 2735 gacagactttaccttcacatattccacataaggcaaagaaagatggcgaccaaattgcag 2676

                                                                        
Query: 359  tagtatgaaaaatctcaacagcttccatctcccccttccaccaactaaaagtaagtccag 418
             |||||||||||| |||||| ||||||||| ||| ||||||||||||| || ||||||| 
Sbjct: 2675 aagtatgaaaaatttcaacaacttccatctaccctttccaccaactaagagcaagtccaa 2616

                                                                        
Query: 419  actgttatcgtcatggctcgcatttggagcaacaacctggg------aactttgaactgt 472
            | |||| || |||||| | || ||||| |||| |||||| |      ||||||| |||||
Sbjct: 2615 agtgttgtcatcatggttggcttttggtgcaataacctgcgaactcaaactttgcactgt 2556

                                                               
Query: 473  tttgcatgagtgattacatactaggacaccaagaaagtgccccttcctgac 523
             |||||||| ||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 2555 cttgcatgaatgattgcaaactagaacaccaagaaagtgtcctttcctgac 2505
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>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08,
             complete sequence
          Length = 140449

 Score =  170 bits (86), Expect = 3e-39
 Identities = 187/221 (84%), Gaps = 6/221 (2%)
 Strand = Plus / Minus

                                                                         
Query: 309   accttgacatattccacatagggcaaagaaagatggcggccaaattgcagtagtatgaaa 368
             ||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 33598 accttcacatattccacataaggcaaagaaagatggcgaccaaattgcagaagtatgaaa 33539

                                                                         
Query: 369   aatctcaacagcttccatctcccccttccaccaactaaaagtaagtccagactgttatcg 428
             ||| |||||| ||||||||| ||| ||||||||||||| || ||||||| | |||| || 
Sbjct: 33538 aatttcaacaacttccatctaccctttccaccaactaagagcaagtccaaagtgttgtca 33479

                                                                         
Query: 429   tcatggctcgcatttggagcaacaacctggg------aactttgaactgttttgcatgag 482
             |||||| | || ||||| |||| |||||| |      ||||||| ||||| |||||||| 
Sbjct: 33478 tcatggttggcttttggtgcaataacctgcgaactcaaactttgcactgtcttgcatgaa 33419

                                                      
Query: 483   tgattacatactaggacaccaagaaagtgccccttcctgac 523
             ||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 33418 tgattgcaaactagaacaccaagaaagtgtcctttcctgac 33378



 Score =  109 bits (55), Expect = 9e-21
 Identities = 106/123 (86%)
 Strand = Plus / Minus

                                                                         
Query: 179   ttgccggccaataagcctgcactgctccggtagcatggagcagacaacctgccccttgac 238
             |||||||||||||||| |||| |||||  ||| || ||||||||  || || ||||||||
Sbjct: 34286 ttgccggccaataagcatgcattgctcttgtaacagggagcagagtacatgtcccttgac 34227

                                                                         
Query: 239   gcggcagagctcgccgtctatcccacagccattgtgggtgtttgcaccaggtttaacctt 298
             |||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||||||| |||
Sbjct: 34226 gcggcaaagctcaccgtctattccacacccattgtgcgtgtttgcacctggtttaagctt 34167

                
Query: 299   gac 301
             |||
Sbjct: 34166 gac 34164
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  170 bits (86), Expect = 3e-39
 Identities = 187/221 (84%), Gaps = 6/221 (2%)
 Strand = Plus / Minus

                                                                            
Query: 309      accttgacatattccacatagggcaaagaaagatggcggccaaattgcagtagtatgaaa 368
                ||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 27090955 accttcacatattccacataaggcaaagaaagatggcgaccaaattgcagaagtatgaaa 27090896

                                                                            
Query: 369      aatctcaacagcttccatctcccccttccaccaactaaaagtaagtccagactgttatcg 428
                ||| |||||| ||||||||| ||| ||||||||||||| || ||||||| | |||| || 
Sbjct: 27090895 aatttcaacaacttccatctaccctttccaccaactaagagcaagtccaaagtgttgtca 27090836

                                                                            
Query: 429      tcatggctcgcatttggagcaacaacctggg------aactttgaactgttttgcatgag 482
                |||||| | || ||||| |||| |||||| |      ||||||| ||||| |||||||| 
Sbjct: 27090835 tcatggttggcttttggtgcaataacctgcgaactcaaactttgcactgtcttgcatgaa 27090776

                                                         
Query: 483      tgattacatactaggacaccaagaaagtgccccttcctgac 523
                ||||| || ||||| |||||||||||||| || ||||||||
Sbjct: 27090775 tgattgcaaactagaacaccaagaaagtgtcctttcctgac 27090735



 Score =  109 bits (55), Expect = 9e-21
 Identities = 106/123 (86%)
 Strand = Plus / Minus

                                                                            
Query: 179      ttgccggccaataagcctgcactgctccggtagcatggagcagacaacctgccccttgac 238
                |||||||||||||||| |||| |||||  ||| || ||||||||  || || ||||||||
Sbjct: 27091643 ttgccggccaataagcatgcattgctcttgtaacagggagcagagtacatgtcccttgac 27091584

                                                                            
Query: 239      gcggcagagctcgccgtctatcccacagccattgtgggtgtttgcaccaggtttaacctt 298
                |||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||||||| |||
Sbjct: 27091583 gcggcaaagctcaccgtctattccacacccattgtgcgtgtttgcacctggtttaagctt 27091524

                   
Query: 299      gac 301
                |||
Sbjct: 27091523 gac 27091521
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>gb|AY106242.1| Zea mays PCO146582 mRNA sequence
          Length = 669

 Score =  147 bits (74), Expect = 4e-32
 Identities = 234/281 (83%), Gaps = 11/281 (3%)
 Strand = Plus / Minus

                                                                       
Query: 246 agctcgccgtctatcccacagccattgtgggtgtttgcaccaggtttaaccttgactgat 305
           |||||||| ||||| |||||||||||||| ||||||||||||||||||| ||| | ||| 
Sbjct: 578 agctcgccatctatgccacagccattgtgagtgtttgcaccaggtttaagctt-aatgac 520

                                                                       
Query: 306 ttcaccttgacatattccacatagggcaaagaaagatggcggccaaattgcagtagtatg 365
           |||||||| |||||||| || || ||| |||| |||||||| || |||||||| ||||||
Sbjct: 519 ttcacctttacatattcgacgtaaggc-aagagagatggcgaccgaattgcagaagtatg 461

                                                                       
Query: 366 aaaaatctcaacagcttccatctcccccttccaccaactaaaagtaagtccagactgtta 425
            ||||||||| ||  |||||||| ||  ||||||||||||||||||||||||  ||||| 
Sbjct: 460 -aaaatctcagcaatttccatcttccttttccaccaactaaaagtaagtccaagctgttg 402

                                                                       
Query: 426 tcgtcatggctcgcatttggagcaacaacctgggaa------ctttgaactgttttgcat 479
           || || ||| | || || || ||||||||||| |||      ||||| |||||  |||||
Sbjct: 401 tcatc-tggatggc-ttcggtgcaacaacctgtgaactcagactttgcactgtcatgcat 344

                                                    
Query: 480 gagtgattacatactaggacaccaagaaagtgccccttcct 520
           || || || |||||||||||||||||||||||||| |||||
Sbjct: 343 gaatggttgcatactaggacaccaagaaagtgccctttcct 303
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>ref|XM_480136.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1818

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 309  accttgacatattccacatagggca 333
            |||||||||||||||||||| ||||
Sbjct: 1411 accttgacatattccacataaggca 1387
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>emb|AJ437338.1|OSA437338 Oryza sativa partial mRNA for putative sphingosine kinase (sphk
           gene)
          Length = 580

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 309 accttgacatattccacatagggca 333
           |||||||||||||||||||| ||||
Sbjct: 200 accttgacatattccacataaggca 176
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>emb|CR318673.9| Zebrafish DNA sequence from clone CH211-132J7 in linkage group 14,
             complete sequence
          Length = 164281

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 460   aactttgaactgttttgcatg 480
             |||||||||||||||||||||
Sbjct: 39603 aactttgaactgttttgcatg 39623
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>gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, complete sequence
          Length = 229964

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    atatagacaactcaaaatcaa 92
             |||||||||||||||||||||
Sbjct: 31249 atatagacaactcaaaatcaa 31269
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>gb|AY396746.1| Foot-and-mouth disease virus - type SAT 1 isolate SAR/11/81 VP1
           gene, partial cds
          Length = 417

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 386 aacaacttgggaactttgaactgtt 410
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>gb|AY396745.1| Foot-and-mouth disease virus - type SAT 1 isolate SAR/10/81 VP1
           gene, partial cds
          Length = 417

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 386 aacaacttgggaactttgaactgtt 410
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 309     accttgacatattccacatagggca 333
               |||||||||||||||||||| ||||
Sbjct: 3015044 accttgacatattccacataaggca 3015020
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>gb|AF056511.1| Foot-and-mouth disease virus SAT 1 isolate SAR/9/81 polyprotein
           mRNA, partial cds
          Length = 447

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 410 aacaacttgggaactttgaactgtt 434
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>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1349_D05
          Length = 174478

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 309   accttgacatattccacatagggca 333
             |||||||||||||||||||| ||||
Sbjct: 65767 accttgacatattccacataaggca 65743
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>dbj|AK065015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F10, full
            insert sequence
          Length = 1818

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 309  accttgacatattccacatagggca 333
            |||||||||||||||||||| ||||
Sbjct: 1411 accttgacatattccacataaggca 1387
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>gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete sequence
          Length = 237167

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 366    aaaaatctcaacagcttccat 386
              |||||||||||||||||||||
Sbjct: 123082 aaaaatctcaacagcttccat 123062
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>gb|AF038467.1|AF038467 Foot-and-mouth disease virus strain SAT-1 isolate Buf4/420/1
           polyprotein (VP1) mRNA, partial cds
          Length = 454

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 417 aacaacttgggaactttgaactgtt 441
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>gb|AF038466.1|AF038466 Foot-and-mouth disease virus strain SAT-1 isolate Buf2/28/1
           polyprotein (VP1) mRNA, partial cds
          Length = 459

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 420 aacaacttgggaactttgaactgtt 444
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>gb|AF038465.1|AF038465 Foot-and-mouth disease virus strain SAT-1 isolate Buf2/147/1
           polyprotein (VP1) mRNA, partial cds
          Length = 459

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 419 aacaacttgggaactttgaactgtt 443
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>gb|AF038464.1|AF038464 Foot-and-mouth disease virus strain SAT-1 isolate Buf2/0/1
           polyprotein (VP1) mRNA, partial cds
          Length = 458

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 420 aacaacttgggaactttgaactgtt 444
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>gb|AF038463.1|AF038463 Foot-and-mouth disease virus strain SAT-1 isolate Buf2/79/1
           polyprotein (VP1) mRNA, partial cds
          Length = 457

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 420 aacaacttgggaactttgaactgtt 444
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>gb|AF038462.1|AF038462 Foot-and-mouth disease virus strain SAT-1 isolate Buf4/545/1
           polyprotein (VP1) mRNA, partial cds
          Length = 455

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 aacaacctgggaactttgaactgtt 473
           |||||| ||||||||||||||||||
Sbjct: 417 aacaacttgggaactttgaactgtt 441
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>gb|AC135668.5| Mus musculus BAC clone RP23-280P7 from chromosome 6, complete sequence
          Length = 207975

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     atagacaactcaaaatcaactgtt 97
              |||||||| |||||||||||||||
Sbjct: 185799 atagacaattcaaaatcaactgtt 185822
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>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162977

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   gttttgcatgagtgattaca 490
             ||||||||||||||||||||
Sbjct: 71837 gttttgcatgagtgattaca 71856
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>ref|XM_958409.1| Neurospora crassa OR74A hypothetical protein ( (AL389901)
           hypothetical protein [Neurospora crassa OR74A] )
           (NCU05414.1) partial mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 ttgacgcggcagagctcgcc 253
           ||||||||||||||||||||
Sbjct: 586 ttgacgcggcagagctcgcc 605
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>ref|XM_325268.1| Neurospora crassa OR74A hypothetical protein ( (AL389901)
           hypothetical protein [Neurospora crassa OR74A] )
           (NCU05414.1) partial mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 ttgacgcggcagagctcgcc 253
           ||||||||||||||||||||
Sbjct: 586 ttgacgcggcagagctcgcc 605
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>gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome 6, complete sequence
          Length = 167991

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     atagacaactcaaaatcaactgtt 97
              |||||||| |||||||||||||||
Sbjct: 127412 atagacaattcaaaatcaactgtt 127389
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>emb|AL389901.1|NCB7F21 Neurospora crassa DNA linkage group II BAC clone B7F21
          Length = 59412

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   ttgacgcggcagagctcgcc 253
             ||||||||||||||||||||
Sbjct: 25989 ttgacgcggcagagctcgcc 26008
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>gb|AC112654.2| Homo sapiens X BAC RP11-44F2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 107921

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    agacaactcaaaatcaactg 95
             ||||||||||||||||||||
Sbjct: 46513 agacaactcaaaatcaactg 46532
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>dbj|AK039410.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330040O19
           product:unclassifiable, full insert sequence
          Length = 3168

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  actgttacaagtaaacaaca 111
           ||||||||||||||||||||
Sbjct: 328 actgttacaagtaaacaaca 347
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>dbj|AK033606.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
           library, clone:9130025L13 product:Similar to FGF
           receptor 4B, full insert sequence
          Length = 3378

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  gttacaagtaaacaacagat 114
           ||||||||||||||||||||
Sbjct: 72  gttacaagtaaacaacagat 53
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>gb|AC024164.6|AC024164 Homo sapiens chromosome 3 clone RP11-350A17 map 3p, complete sequence
          Length = 152580

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    aaaaatctcaacagcttcca 385
              ||||||||||||||||||||
Sbjct: 109547 aaaaatctcaacagcttcca 109528
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       aaatatacagatacgtcaca 20
               ||||||||||||||||||||
Sbjct: 7723993 aaatatacagatacgtcaca 7724012
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>gb|AC007100.3| Homo sapiens BAC clone RP11-462D13 from 2, complete sequence
          Length = 210344

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 442   ttggagcaacaacctgggaacttt 465
             |||||| |||||||||||||||||
Sbjct: 61830 ttggagaaacaacctgggaacttt 61807
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>gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K24 map 3p, complete sequence
          Length = 142190

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    aaaaatctcaacagcttcca 385
              ||||||||||||||||||||
Sbjct: 119405 aaaaatctcaacagcttcca 119424
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>gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y, complete sequence
          Length = 176524

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     agacaactcaaaatcaactg 95
              ||||||||||||||||||||
Sbjct: 117363 agacaactcaaaatcaactg 117344
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>ref|NM_172891.1| Mus musculus serine/threonine/tyrosine kinase 1 (Styk1), mRNA
          Length = 3378

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  gttacaagtaaacaacagat 114
           ||||||||||||||||||||
Sbjct: 72  gttacaagtaaacaacagat 53
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>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1077_A12
          Length = 149089

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaatatacagatacgtcaca 20
             ||||||||||||||||||||
Sbjct: 60258 aaatatacagatacgtcaca 60277
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>emb|AL513423.3|HS518K17 Homo sapiens chromosome 9 BAC RP11-518K17, complete sequence
          Length = 170535

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    aatatagacaactcaaaatc 90
             ||||||||||||||||||||
Sbjct: 44277 aatatagacaactcaaaatc 44296
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>gb|AC171070.2| Rhesus Macaque CHR5 BAC CH250-450H6 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 171429

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   cttccatctcccccttccac 399
             ||||||||||||||||||||
Sbjct: 14029 cttccatctcccccttccac 14048
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>emb|AL626762.10| Mouse DNA sequence from clone RP23-68F3 on chromosome 4, complete
             sequence
          Length = 228767

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    actgttacaagtaaacaaca 111
             ||||||||||||||||||||
Sbjct: 13359 actgttacaagtaaacaaca 13378
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>gb|AC087589.3| Homo sapiens chromosome 3 clone RP11-1102N22 map 3p, complete sequence
          Length = 181736

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    aaaaatctcaacagcttcca 385
              ||||||||||||||||||||
Sbjct: 125253 aaaaatctcaacagcttcca 125234
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>emb|AL591222.2|HS378I6 Homo sapiens chromosome 9 BAC RP11-378I6, complete sequence
          Length = 147211

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     acaactcaaaatcaactgtt 97
              ||||||||||||||||||||
Sbjct: 108704 acaactcaaaatcaactgtt 108723


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,992,070
Number of Sequences: 3902068
Number of extensions: 3992070
Number of successful extensions: 68967
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68834
Number of HSP's gapped (non-prelim): 132
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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