>NOP12_GIBZE (Q4IQW0) Nucleolar protein 12|
          Length = 559

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
 Frame = -2

Query: 425 EEPKTKDIQEIIKSKSME-----------AGPKRKRVATRKCAGIDSKQVNN-NHEEESE 282
           EE +++D+ E +K   +E           +  +RKR        ++ K ++    EEE++
Sbjct: 102 EEEESEDVDETMKDAPVELDDIIDATEDKSNKERKRKRKNDNDDLEGKYLDKVAAEEEAD 161

Query: 281 QEGTRQHNDSRPRTRRSCVDKE 216
           + G RQ ND+  +T +  VD+E
Sbjct: 162 RAGKRQKNDALTKTEKPAVDEE 183

>RL19_SULAC (O05639) 50S ribosomal protein L19e|
          Length = 150

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = -2

Query: 452 NTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNN-HEEESEQE 276
           N  R+  ++E    +DI+++IK +++   PKR         GI S ++    H+  S+ E
Sbjct: 25  NPERLEEVEEALTREDIKKLIKERAVIVNPKR---------GISSGRLKERKHKRRSKGE 75

Query: 275 GTRQHNDSRPRTRRSCVDKELMNKDIQK 192
           G R+H   + ++     DKE+    I+K
Sbjct: 76  G-RKHGSRKGKSGARTGDKEIWINKIRK 102

>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2|
          Length = 876

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
 Frame = -2

Query: 401 QEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSR--PRTRRS- 231
           QE  + ++ + G   K+   R  AG+   +   N ++E +++G +  NDS    +T++S 
Sbjct: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE 329

Query: 230 -CVDKELMNKDIQKCGVSRTRKTNR 159
              DKE   +D +K     ++K NR
Sbjct: 330 GDGDKEEKKEDSEKEAKKSSKKRNR 354

>CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein|
          Length = 337

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
 Frame = -2

Query: 470 KRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSME-----------AGPKRKRVATRKCAGI 324
           KR R+S   + VH+ ++  T+ I+++IK    E           AG   ++   R+ A +
Sbjct: 219 KRRRQSYRAKNVHITKKSYTEVIRDVIKVHMEELSSHWQEEQGRAGDAAEKNEERRSASV 278

Query: 323 DSKQVNNNHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTRK 168
           DS+Q   ++ +       R  + S  + +R        NKD  K   SR RK
Sbjct: 279 DSRQSGGSYLDVESSRHRRARSRSPHKRKR--------NKD--KSSESRRRK 320

>IF2_PHOPR (Q6LUJ2) Translation initiation factor IF-2|
          Length = 899

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
 Frame = -2

Query: 506 SKNQRMMNIXRTKRGRRSNTGRIVHLDEEPKTKDIQEII----KSKSMEAGPKRKRVATR 339
           ++ Q +++  + + G  S  G    L  + KT     +     KSKS++   ++KR   +
Sbjct: 40  TEKQSLLSHLQKEHGGESTDGTPTRLTLQRKTHSTLSVAGTGGKSKSVQVEVRKKRTFVK 99

Query: 338 KCAGIDSKQVNNNHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTRKT 165
           + A  + ++  +N ++E+E+   R+  +   R     + +E   +D +      T  T
Sbjct: 100 RSALEEEQRAADNAKQEAEETAQREAENVAKRKEDVRLAEEKAKRDEENKAKRNTEDT 157

>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 19/87 (21%), Positives = 40/87 (45%)
 Frame = -2

Query: 428  DEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSR 249
            +EE K K+ +E  K K  E   K+K    +K    + K+     E++ ++EG +  N+  
Sbjct: 1063 EEEKKKKEEEE--KKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDE 1120

Query: 248  PRTRRSCVDKELMNKDIQKCGVSRTRK 168
               +    +K+   ++ +K    + +K
Sbjct: 1121 ENKKNEDEEKKKNEEEEKKKQEEKNKK 1147

>LIPA1_HUMAN (Q13136) Liprin-alpha-1 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-1)
           (PTPRF-interacting protein alpha-1) (LAR-interacting
           protein 1) (LIP.1)
          Length = 1202

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = -2

Query: 464 GRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVAT 342
           G+RS+ G + H ++  K  ++QEII  +S E    ++R+A+
Sbjct: 235 GKRSSDGSLSHEEDLAKVIELQEIISKQSREQSQMKERLAS 275

>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9|
          Length = 728

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +1

Query: 205 LFINSLSTQLRLVLGLESLCCRVPSCSDSSSWLLFTCLLSIPAHLRVATRFLL 363
           L ++ ++T   L+L + ++   +   + SS +LLF  + S+P  L V   FL+
Sbjct: 89  LIVHPIATGFTLILTVLAMLAHIQGPASSSRYLLFCLVFSLPTFLLVLLSFLV 141

>ACTA_LISMO (P33379) Actin assembly-inducing protein precursor|
          Length = 639

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/70 (25%), Positives = 29/70 (41%)
 Frame = -2

Query: 452 NTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEG 273
           NTG       E  ++DI+E+ KS  +    K   +A  K        +NNN+ E++E   
Sbjct: 56  NTGPRYETAREVSSRDIKELEKSNKVRNTNKADLIAMLKEKAEKGPNINNNNSEQTENAA 115

Query: 272 TRQHNDSRPR 243
             +      R
Sbjct: 116 INEEASGADR 125

>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin|
            repeat-containing cofactor 1)
          Length = 2664

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
 Frame = -2

Query: 485  NIXRTKRGRRSNTGRIVHL-DEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQV 309
            ++ RT   +    GR  +  D   K+ D Q   + K  E   +RK            ++V
Sbjct: 1143 DLPRTDGLQEKEEGREAYASDRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKV 1202

Query: 308  NNNHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQK 192
               H+E+ ++E T ++ D   R  R+ VD     K+ QK
Sbjct: 1203 FEKHKEKKDKESTEKYKD---RKDRASVDSTQDKKNKQK 1238

>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (Splicing regulatory protein 508) (SRrp508)
          Length = 508

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
 Frame = -2

Query: 506 SKNQRMMNIXRTKRGRRSNTGRIVHLDEEPKTKDIQ-----EIIKSKSMEAGPKRKRVAT 342
           S+ +R        R +R +T   +   E  K KD +     E  + K  E G  + R   
Sbjct: 245 SRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKE 304

Query: 341 RKCAGIDSKQVNNNHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTRKTN 162
           R+      K    + E++ E+E  ++H   R + +    DKE   +  +   +   RK +
Sbjct: 305 RE------KDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD 358

Query: 161 R 159
           +
Sbjct: 359 K 359

>DBP9_CRYNE (Q5K7L2) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)|
          Length = 627

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = -2

Query: 350 VATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTR 171
           VAT + AG D+++  +  +EESE EG    +D +    +   +KE   +     G S+ R
Sbjct: 331 VATDEGAGADAEEEEDVKQEESESEGEEDEDDDKEAEDK---EKEAKEEAKPAPGPSKRR 387

Query: 170 KTN 162
            T+
Sbjct: 388 ATS 390

>GOGA5_XENLA (Q6GNT7) Golgin subfamily A member 5 (Golgin-84)|
          Length = 722

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -2

Query: 434 HLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAG---IDSKQ-VNNNHEEESEQEGTR 267
           H++E+ K+ D+Q+ +K+  +     ++ +A  K      + SK+ + N+ +E S  EG  
Sbjct: 391 HMEEKRKSDDLQQQLKTSKVGLDSLKQEMADYKQKATRILQSKEKLINSLKEGSGIEGLD 450

Query: 266 QHNDSRPRTRRSCVDKELMNKDIQK 192
            H+ S         ++++  ++IQK
Sbjct: 451 SHSASTMELEEMRHERDMQREEIQK 475

>NEBL_HUMAN (O76041) Nebulette (Actin-binding Z-disk protein)|
          Length = 1014

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = -2

Query: 500 NQRMMNIXRTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGID 321
           N  +++I R KR     +       E+   KD++ IIK K M+AG     +   K A   
Sbjct: 428 NSEVLDIQRAKRASEMAS-------EKEYKKDLESIIKGKGMQAGTDTLEMQHAKKAAEI 480

Query: 320 SKQVNNNHEEESEQEG 273
           + + +   + E+E +G
Sbjct: 481 ASEKDYKRDLETEIKG 496

>MYSS_CHICK (P13538) Myosin heavy chain, skeletal muscle, adult|
          Length = 1938

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
 Frame = -2

Query: 503  KNQRMMNIXRTKRGR-RSNTGRIVHLDEEPK-------------TKDIQEIIKSKSMEAG 366
            +NQRM+N   T+R R ++ TG      EE               T+ I+E+ +    E  
Sbjct: 1267 QNQRMINDLNTQRARLQTETGEYSRQAEEKDALISQLSRGKQGFTQQIEELKRHLEEEIK 1326

Query: 365  PKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQ 264
             K       + A  D + +   +EEE E +G  Q
Sbjct: 1327 AKNALAHALQSARHDCELLREQYEEEQEAKGELQ 1360

>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad|
           development protein 2)
          Length = 2032

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 242 TRRSCVDKELMNKDIQKCGVSRTRKTNR*LVEI 144
           TRR C      ++D+ KCG  RTR  +R + E+
Sbjct: 290 TRRECSRFIASSRDLHKCGCGRTRDAHRNIPEL 322

>SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7.11.1)|
           (Protein kinase 18)
          Length = 982

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = -2

Query: 425 EEPKTKDIQEIIKSKSMEAGPKRKRVAT---RKCAGIDSKQVNNNHEEESEQEGTRQHND 255
           ++P    I+  +K   M     ++R+AT    K A + S+++ N  +EE  +E       
Sbjct: 479 DDPLDTSIRAPVKDLHMPHRAVKERIATLQNHKFATLRSQRIINQEQEEYTKENNMYEQM 538

Query: 254 SRPRTRRSCVDKELMNKDIQKCGVSR 177
           S+ +  R    KEL   + ++C + R
Sbjct: 539 SKYKHLRQAHHKELQQFE-ERCALDR 563

>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked nuclear protein)
            (Heterochromatin protein 2) (HP1 alpha-interacting
            protein) (HP1-BP38 protein)
          Length = 2476

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = -2

Query: 428  DEEPKTKDIQEII---KSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHN 258
            ++ P+T+  ++       +S +   KR+R+  ++    DS   N +H EE ++EG  +  
Sbjct: 1386 EQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQE----DSSSENKSHSEEDKKEGDEEDE 1441

Query: 257  DSRPRTRRSCVDKELMNKDIQKCGVSRTR 171
            +          D+E  N D +  G  R +
Sbjct: 1442 EDEDE------DEEDENDDSKSPGKGRKK 1464

>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP)
          Length = 2492

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/83 (20%), Positives = 37/83 (44%)
 Frame = -2

Query: 428  DEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSR 249
            +E P  ++ +  + S+S     + K+   R         V++    E ++   ++H + +
Sbjct: 1308 EENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVK 1367

Query: 248  PRTRRSCVDKELMNKDIQKCGVS 180
             R RR    ++  + D Q+ GVS
Sbjct: 1368 GRNRRKVSSEDSEDSDFQESGVS 1390

>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP)
          Length = 2492

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/83 (20%), Positives = 37/83 (44%)
 Frame = -2

Query: 428  DEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSR 249
            +E P  ++ +  + S+S     + K+   R         V++    E ++   ++H + +
Sbjct: 1308 EENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVK 1367

Query: 248  PRTRRSCVDKELMNKDIQKCGVS 180
             R RR    ++  + D Q+ GVS
Sbjct: 1368 GRNRRKVSSEDSEDSDFQESGVS 1390

>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP) (Znf-HX)
          Length = 2492

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/83 (20%), Positives = 37/83 (44%)
 Frame = -2

Query: 428  DEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSR 249
            +E P  ++ +  + S+S     + K+   R         V++    E ++   ++H + +
Sbjct: 1308 EENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVK 1367

Query: 248  PRTRRSCVDKELMNKDIQKCGVS 180
             R RR    ++  + D Q+ GVS
Sbjct: 1368 GRNRRKVSSEDSEDSDFQESGVS 1390

>LAG3_HUMAN (P18627) Lymphocyte activation gene 3 protein precursor (LAG-3)|
           (FDC protein) (CD223 antigen)
          Length = 525

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 217 SLSTQLRLVLGLESLCCRVPSCSDSSSWLLFTCLLSIP 330
           +LS +LRL LG  S+    P    +S W++  C  S P
Sbjct: 157 ALSCRLRLRLGQASMTASPPGSLRASDWVILNCSFSRP 194

>TAF7_SCHPO (O13701) Transcription initiation factor TFIID subunit 7|
           (Transcription initiation factor TFIID 55 kDa subunit)
           (TAFII-55)
          Length = 393

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = -2

Query: 431 LDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDS 252
           +DE+     I++ +   S +    R+  A  + AG +S       EEE E+E     +++
Sbjct: 274 MDEDDLAGQIEQGMLELSQDT---RESTAEPRAAGEESASEEEEEEEEEEEEENEADDET 330

Query: 251 RPRTRRSCVDKELMNK---DIQKCGVSRTRKTN 162
           R   R++ + +E +++    IQK        TN
Sbjct: 331 RENKRQNRLVREFISELESSIQKRRKDADEATN 363

>TATD2_HUMAN (Q93075) TatD DNase domain-containing deoxyribonuclease 2 (EC|
           3.1.21.-)
          Length = 761

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
 Frame = -2

Query: 506 SKNQRMMNIXRTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGP-KRKR-----VA 345
           S   RM +      G   NT R +   EE  +++ +    S+S E    K KR     + 
Sbjct: 411 SSRSRMSDYSPNSTGSVQNTSRDMEASEEGWSQNSRSFRFSRSSEEREVKEKRTFQEEMP 470

Query: 344 TRKCAGIDSKQVNNNHEEESEQEG 273
            R C G  S  +  +H E S +EG
Sbjct: 471 PRPCGGHASSSLPKSHLEPSLEEG 494

>FRU_DROME (Q8IN81) Sex determination protein fruitless|
          Length = 955

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/54 (25%), Positives = 24/54 (44%)
 Frame = -2

Query: 323 DSKQVNNNHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTRKTN 162
           +S   NNN     E+  + +    R R R    D+EL    +++   S+ R+ N
Sbjct: 410 NSSSNNNNSSSNRERNNSGERERERERERERDRDRELSTTPVEQLSSSKRRRKN 463

>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of|
           deformed) (52-kDa bracketing protein) (B52 protein)
          Length = 375

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/80 (22%), Positives = 33/80 (41%)
 Frame = -2

Query: 476 RTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKCAGIDSKQVNNNH 297
           R++  RRS + R  H   + +++      +SKS      R R  +R     D  +  +  
Sbjct: 215 RSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSRSRSNKSRDVSKSKSKS 274

Query: 296 EEESEQEGTRQHNDSRPRTR 237
              +     ++  DSR R+R
Sbjct: 275 HSRTRSRSPKRERDSRSRSR 294

>FBX38_HUMAN (Q6PIJ6) F-box only protein 38 (Modulator of KLF7 activity homolog)|
           (MoKA)
          Length = 1188

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -2

Query: 386 SKSMEAGPKRKRVATRKCAGIDSKQVNNNHEEESEQEGTRQHNDSRPRTRRSCV 225
           S++ME G     V  R C          +  +ES++  +R  ++ RP T R+CV
Sbjct: 760 SEAMEEGDAESSVCPRCCC---------HRPQESQRRTSRCSDEERPSTSRACV 804


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,233,867
Number of Sequences: 219361
Number of extensions: 1263423
Number of successful extensions: 3956
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3930
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)