ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62n08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a ribosomal protein 7a (Rpl7a) pseudogene, complete sequence Length = 161600 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 ttcttcttcatggttattattt 309 |||||||||||||||||||||| Sbjct: 90890 ttcttcttcatggttattattt 90869
>gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191148 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 attttttaaaaagcaatctaaa 78 |||||||||||||||||||||| Sbjct: 187992 attttttaaaaagcaatctaaa 187971
>emb|CR381594.6| Zebrafish DNA sequence from clone DKEY-12H3 in linkage group 19, complete sequence Length = 182645 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 tattacattttttaaaaagcaa 72 |||||||||||||||||||||| Sbjct: 31075 tattacattttttaaaaagcaa 31054
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttgattatttcctgaatatc 407 ||||||||||||||||||||| Sbjct: 1824827 tttgattatttcctgaatatc 1824807
>gb|AC146254.2| Pan troglodytes BAC clone CH251-128L22 from Y, complete sequence Length = 177240 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ttacattttttaaaaagcaat 73 ||||||||||||||||||||| Sbjct: 77709 ttacattttttaaaaagcaat 77729
>emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chromosome 1 Contains the KCNK1 gene for potassium channel subfamily K member 1 and one CpG island, complete sequence Length = 71371 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cattttttaaaaagcaatcta 76 ||||||||||||||||||||| Sbjct: 59566 cattttttaaaaagcaatcta 59586
>emb|CR378666.1| Photobacterium profundum SS9; segment 4/12 Length = 348313 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 tacttgcttgctatcaatacc 329 ||||||||||||||||||||| Sbjct: 165855 tacttgcttgctatcaatacc 165875
>gb|AC064801.10| Homo sapiens chromosome 18, clone RP11-120K19, complete sequence Length = 167843 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 tacattttttaaaaagcaatc 74 ||||||||||||||||||||| Sbjct: 83298 tacattttttaaaaagcaatc 83318
>dbj|BS000629.2| Pan troglodytes chromosome Y clone: PTB-194O02, complete sequence Length = 184689 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ttacattttttaaaaagcaat 73 ||||||||||||||||||||| Sbjct: 143351 ttacattttttaaaaagcaat 143371
>dbj|BS000552.1| Pan troglodytes chromosome Y clone:PTB-302F24, complete sequences Length = 157728 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaat 73 ||||||||||||||||||||| Sbjct: 66743 ttacattttttaaaaagcaat 66723
>emb|AL954137.18| Zebrafish DNA sequence from clone CH211-222L21 in linkage group 11, complete sequence Length = 222163 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 attacattttttaaaaagcaa 72 ||||||||||||||||||||| Sbjct: 118473 attacattttttaaaaagcaa 118453
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaat 73 ||||||||||||||||||||| Sbjct: 17998350 ttacattttttaaaaagcaat 17998330
>gb|AC154365.2| Mus musculus BAC clone RP24-567H4 from chromosome 14, complete sequence Length = 151459 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 tacattttttaaaaagcaatctaaa 78 ||||||||||||||||||| ||||| Sbjct: 97978 tacattttttaaaaagcaaactaaa 98002
>gb|AC117462.5| Homo sapiens 3 BAC RP11-354H21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146853 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 attacattttttaaaaagcaa 72 ||||||||||||||||||||| Sbjct: 128742 attacattttttaaaaagcaa 128762
>gb|AC002531.1|AC002531 Homo sapiens chromosome Y, clone 486_O_8, complete sequence Length = 197900 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaat 73 ||||||||||||||||||||| Sbjct: 190367 ttacattttttaaaaagcaat 190347
>gb|AC004474.1|AC004474 Homo sapiens chromosome Y, clone 475I1, complete sequence Length = 148280 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaat 73 ||||||||||||||||||||| Sbjct: 36661 ttacattttttaaaaagcaat 36641
>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence Length = 164720 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 aattattggatttccactaat 156 ||||||||||||||||||||| Sbjct: 25301 aattattggatttccactaat 25281
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tacattttttaaaaagcaatctaa 77 ||||||| |||||||||||||||| Sbjct: 65271 tacatttcttaaaaagcaatctaa 65294
>gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome 8, complete sequence Length = 212711 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gctattacattttttaaaaa 68 |||||||||||||||||||| Sbjct: 147670 gctattacattttttaaaaa 147651
>gb|AC150208.1| Pan troglodytes chromosome X clone PTB-043C05 map human ortholog p21.3, complete sequence Length = 194447 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cattttttaaaaagcaatct 75 |||||||||||||||||||| Sbjct: 4633 cattttttaaaaagcaatct 4614
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 catttgcgagttgcgacacg 353 |||||||||||||||||||| Sbjct: 123379 catttgcgagttgcgacacg 123398
>gb|AC129288.3| Mus musculus BAC clone RP24-481M4 from chromosome 1, complete sequence Length = 179082 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tttaaaaagcaatctaaaca 80 |||||||||||||||||||| Sbjct: 95874 tttaaaaagcaatctaaaca 95855
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 tccactaatcaacgatttgt 167 |||||||||||||||||||| Sbjct: 320263 tccactaatcaacgatttgt 320244
>gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 acattttttaaaaagcaatctaaa 78 |||||||||||||||||| ||||| Sbjct: 92542 acattttttaaaaagcaaactaaa 92519
>emb|AL844597.12| Zebrafish DNA sequence from clone DKEY-9M10 in linkage group 10, complete sequence Length = 78650 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaa 72 |||||||||||||||||||| Sbjct: 29015 ttacattttttaaaaagcaa 28996
>gb|AC141566.4| Mus musculus BAC clone RP23-89G14 from chromosome 7, complete sequence Length = 236600 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gctattacattttttaaaaa 68 |||||||||||||||||||| Sbjct: 85934 gctattacattttttaaaaa 85953
>gb|AC124423.3| Mus musculus BAC clone RP24-328B20 from chromosome 8, complete sequence Length = 171403 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gctattacattttttaaaaa 68 |||||||||||||||||||| Sbjct: 161661 gctattacattttttaaaaa 161680
>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence Length = 211511 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttattatttacttgcttgct 320 |||||||||||||||||||| Sbjct: 45815 ttattatttacttgcttgct 45834
>emb|AL442127.7| Human DNA sequence from clone RP11-297I6 on chromosome 13 Contains two novel genes, the 5' end of the EFNB2 gene for ephrin-B2 (HTKL EPLG5 LERK5), an ATP synthase H+ transporting mitochondrial F0 complex subunit c pseudogene and two CpG islands, complete sequence Length = 210115 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 acattttttaaaaagcaatc 74 |||||||||||||||||||| Sbjct: 186610 acattttttaaaaagcaatc 186591
>emb|AL161935.10| Human DNA sequence from clone RP11-472N13 on chromosome 10 Contains the 3' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression), two novel genes, the glutamate dehydrogenase pseudogene 5 (GLUDP5) and a CpG island, complete sequence Length = 191824 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaa 72 |||||||||||||||||||| Sbjct: 180517 ttacattttttaaaaagcaa 180498
>gb|AC117460.7| Homo sapiens 3 BAC RP11-343D2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183595 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gctattacattttttaaaaa 68 |||||||||||||||||||| Sbjct: 173591 gctattacattttttaaaaa 173572
>emb|AL133263.8| Human DNA sequence from clone RP3-347L7 on chromosome 6 Contains the 3' end of a gene for a novel protein, complete sequence Length = 33354 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 taaacaacgatgttcataaa 94 |||||||||||||||||||| Sbjct: 18786 taaacaacgatgttcataaa 18805
>gb|AC157798.5| Mus musculus chromosome 1, clone RP24-153N24, complete sequence Length = 163087 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ttcttgaaacaccacacttt 195 |||||||||||||||||||| Sbjct: 132570 ttcttgaaacaccacacttt 132551
>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5 Length = 349607 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaaaaagcaatctaaacaacga 84 |||||||||||||||||| ||||| Sbjct: 26581 tttaaaaagcaatctaaaaaacga 26604
>emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in linkage group 19, complete sequence Length = 138519 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gcaatctaaacaacgatgtt 88 |||||||||||||||||||| Sbjct: 1078 gcaatctaaacaacgatgtt 1059
>emb|BX927217.5| Zebrafish DNA sequence from clone DKEY-8J20 in linkage group 19, complete sequence Length = 10464 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gcaatctaaacaacgatgtt 88 |||||||||||||||||||| Sbjct: 9542 gcaatctaaacaacgatgtt 9523
>gb|AC113223.3| Homo sapiens X BAC RP13-597O16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165785 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cattttttaaaaagcaatct 75 |||||||||||||||||||| Sbjct: 84840 cattttttaaaaagcaatct 84821
>gb|AC112495.2| Homo sapiens X BAC RP11-149B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92312 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cattttttaaaaagcaatct 75 |||||||||||||||||||| Sbjct: 53111 cattttttaaaaagcaatct 53092
>gb|AC103842.2| Homo sapiens chromosome 8, clone RP11-367J23, complete sequence Length = 150506 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tcctgaatatctttagtttt 416 |||||||||||||||||||| Sbjct: 72144 tcctgaatatctttagtttt 72125
>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence Length = 128411 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tattacattttttaaaaagc 70 |||||||||||||||||||| Sbjct: 122543 tattacattttttaaaaagc 122562
>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence Length = 188389 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ttcttgaaacaccacacttt 195 |||||||||||||||||||| Sbjct: 165747 ttcttgaaacaccacacttt 165766
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ttttgaatgtctttgttcatcaat 216 |||||||||| ||||||||||||| Sbjct: 73803 ttttgaatgtttttgttcatcaat 73780
>ref|NM_059507.2| Caenorhabditis elegans D2092.1b (D2092.1) mRNA, complete cds Length = 2820 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 gattcttcttcatggttattattt 309 ||||||||||||| |||||||||| Sbjct: 377 gattcttcttcatcgttattattt 354
>dbj|AK036965.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930031C09 product:unclassifiable, full insert sequence Length = 3381 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ttcttgaaacaccacacttt 195 |||||||||||||||||||| Sbjct: 3230 ttcttgaaacaccacacttt 3249
>emb|BX470221.9| Zebrafish DNA sequence from clone CH211-86K6 in linkage group 1, complete sequence Length = 155895 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ctattacattttttaaaaag 69 |||||||||||||||||||| Sbjct: 86913 ctattacattttttaaaaag 86932
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 catttgcgagttgcgacacg 353 |||||||||||||||||||| Sbjct: 25054526 catttgcgagttgcgacacg 25054545
>gb|AC131948.1| Homo sapiens BAC clone RP11-134F18 from 4, complete sequence Length = 22187 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ttttttaaaaagcaatctaa 77 |||||||||||||||||||| Sbjct: 9964 ttttttaaaaagcaatctaa 9983
>gb|AC108068.3| Homo sapiens BAC clone RP11-574H22 from 2, complete sequence Length = 79667 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 aatatctttagtttttggtt 421 |||||||||||||||||||| Sbjct: 65636 aatatctttagtttttggtt 65617
>gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180124 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tacattttttaaaaagcaatctaa 77 ||||||| |||||||||||||||| Sbjct: 151301 tacatttcttaaaaagcaatctaa 151324
>gb|AC117394.10| Homo sapiens 3 BAC RP11-529G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ttctattacatgctaaatta 140 |||||||||||||||||||| Sbjct: 83465 ttctattacatgctaaatta 83484
>gb|AC005495.2| Homo sapiens chromosome 17, clone RP11-293K20, complete sequence Length = 185252 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaa 72 |||||||||||||||||||| Sbjct: 134974 ttacattttttaaaaagcaa 134955
>gb|AC096646.1| Homo sapiens BAC clone RP11-2F5 from 2, complete sequence Length = 156270 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 tacattttttaaaaagcaatctaaacaa 81 |||||||||||||||| ||| ||||||| Sbjct: 152306 tacattttttaaaaagaaatataaacaa 152279
>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I, complete sequence Length = 117585 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ttttttaaaaagcaatctaa 77 |||||||||||||||||||| Sbjct: 53700 ttttttaaaaagcaatctaa 53719
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 tttttaaaaagcaatctaaa 78 |||||||||||||||||||| Sbjct: 1137317 tttttaaaaagcaatctaaa 1137336
>gb|AF206325.1|AF206325 Branchiostoma belcheri bone morphogenetic protein 2/4 (BMP2/4) mRNA, complete cds Length = 2148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctccgattcttcttcatggt 301 |||||||||||||||||||| Sbjct: 591 ctccgattcttcttcatggt 572
>emb|CR751224.20| Zebrafish DNA sequence from clone DKEY-241F21 in linkage group 22, complete sequence Length = 151612 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 taaaaagtacaaatctgatg 110 |||||||||||||||||||| Sbjct: 115325 taaaaagtacaaatctgatg 115306
>emb|BX842240.3| Zebrafish DNA sequence from clone DKEY-13I15 in linkage group 20, complete sequence Length = 168556 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 ccatagattttgatttgattattt 397 ||||||| |||||||||||||||| Sbjct: 1999 ccatagaatttgatttgattattt 2022
>emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in linkage group 19, complete sequence Length = 202006 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tattacattttttaaaaagc 70 |||||||||||||||||||| Sbjct: 40730 tattacattttttaaaaagc 40711
>emb|CT737307.2| CH251-89L9, complete sequence Length = 180080 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cattttttaaaaagcaatct 75 |||||||||||||||||||| Sbjct: 103906 cattttttaaaaagcaatct 103925
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 tattacattttttaaaaagcaatctaaa 78 ||||||||||||||||| |||| ||||| Sbjct: 1518107 tattacattttttaaaatgcaagctaaa 1518080
>gb|AF068750.1|AF068750 Branchiostoma floridae bone morphogenetic protein 2/4 (AmphiBMP2/4) mRNA, complete cds Length = 2018 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ctccgattcttcttcatggt 301 |||||||||||||||||||| Sbjct: 449 ctccgattcttcttcatggt 430
>dbj|AP005901.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-454P7, complete sequence Length = 194034 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 389 tgattatttcctgaatatctttagtttt 416 ||||||||| |||| ||||||||||||| Sbjct: 114180 tgattattttctgattatctttagtttt 114207
>dbj|AP003439.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1629B1 Length = 168587 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 attatttcctgaatatcttt 410 |||||||||||||||||||| Sbjct: 105833 attatttcctgaatatcttt 105852
>emb|AL845271.10| Mouse DNA sequence from clone RP23-119O19 on chromosome 2, complete sequence Length = 136949 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ttacattttttaaaaagcaatcta 76 ||||||||||||||||||| |||| Sbjct: 103636 ttacattttttaaaaagcattcta 103613
>emb|BX908759.27| Zebrafish DNA sequence from clone DKEY-27J5 in linkage group 1, complete sequence Length = 231898 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 tattacattttttaaaaagcaatctaaa 78 ||||||| ||||||||||||||| |||| Sbjct: 7860 tattacagtttttaaaaagcaatttaaa 7887
>emb|CR956624.6| Pig DNA sequence from clone CH242-281E17 on chromosome 17, complete sequence Length = 155839 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctattacattttttaaaaag 69 |||||||||||||||||||| Sbjct: 145701 ctattacattttttaaaaag 145682
>emb|AL805911.6| Mouse DNA sequence from clone RP23-71K8 on chromosome X, complete sequence Length = 157092 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tttgatttgattatttcctg 401 |||||||||||||||||||| Sbjct: 16842 tttgatttgattatttcctg 16823 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,375,475 Number of Sequences: 3902068 Number of extensions: 6375475 Number of successful extensions: 182454 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 182119 Number of HSP's gapped (non-prelim): 335 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
