>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit PWS4.3)
          Length = 174

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESGKA 216
           RQVQ  SFIAFRPPGCEESGKA
Sbjct: 153 RQVQCVSFIAFRPPGCEESGKA 174

>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit PW9)
          Length = 175

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESGKA 216
           RQVQ  SFIAFRPPGCEESGKA
Sbjct: 154 RQVQCVSFIAFRPPGCEESGKA 175

>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512|
           (EC 4.1.1.39) (RuBisCO small subunit) (Fragment)
          Length = 113

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESGKA 216
           RQVQ  SFIAF+PPGCEESGKA
Sbjct: 92  RQVQCVSFIAFKPPGCEESGKA 113

>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 174

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESGKA 216
           RQVQ  SFIAF+PPGC+ESGKA
Sbjct: 153 RQVQCVSFIAFKPPGCQESGKA 174

>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 175

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESGKA 216
           RQVQ  SFIA +PPGCEESGKA
Sbjct: 154 RQVQSVSFIASKPPGCEESGKA 175

>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit C)
          Length = 175

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESG 222
           RQVQ  SFIA++PPGCEESG
Sbjct: 154 RQVQLISFIAYKPPGCEESG 173

>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit A)
          Length = 175

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESG 222
           RQVQ  SFIA++PPGCEESG
Sbjct: 154 RQVQLISFIAYKPPGCEESG 173

>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 172

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPGCEESG 222
           RQVQ  SFIA+  PGCEESG
Sbjct: 152 RQVQLISFIAYN-PGCEESG 170

>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,|
           chloroplast precursor (EC 4.1.1.39) (RuBisCO small
           subunit 3)
          Length = 180

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPG 237
           RQVQ  SFIAF+PPG
Sbjct: 165 RQVQCVSFIAFKPPG 179

>MNN1_YEAST (P39106) Alpha-1,3-mannosyltransferase MNN1 (EC 2.4.1.-)|
          Length = 762

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 124 NFLXYDLFMYEHRLWSIYAYVNSSTAYTYTTPVPXL 17
           NF  YD F +EH++   + ++N+ T  T+   VP +
Sbjct: 235 NFKKYDQFEFEHKM---FPFINNFTTETFHEMVPKI 267

>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 182

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -1

Query: 281 RQVQXXSFIAFRPPG 237
           RQVQ  SFIA++PPG
Sbjct: 167 RQVQIISFIAYKPPG 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,535,003
Number of Sequences: 219361
Number of extensions: 475096
Number of successful extensions: 747
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)