ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 234 1e-58
2gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 167 2e-38
3emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat... 111 1e-21
4emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 103 3e-19
5dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 103 3e-19
6dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 103 3e-19
7dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 103 3e-19
8emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 96 7e-17
9gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 96 7e-17
10dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 96 7e-17
11dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 96 7e-17
12dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphat... 94 3e-16
13emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 88 2e-14
14dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 88 2e-14
15dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for r... 88 2e-14
16dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphat... 88 2e-14
17dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 88 2e-14
18dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 88 2e-14
19dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 88 2e-14
20dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 88 2e-14
21dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 88 2e-14
22dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisph... 88 2e-14
23dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for r... 88 2e-14
24dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 88 2e-14
25dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 88 2e-14
26dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 88 2e-14
27dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 88 2e-14
28dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 88 2e-14
29emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr... 82 1e-12
30emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 80 4e-12
31dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 80 4e-12
32dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 80 4e-12
33dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 80 4e-12
34dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 80 4e-12
35dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 80 4e-12
36dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for rib... 80 4e-12
37dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 80 4e-12
38dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 80 4e-12
39dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 80 4e-12
40dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 80 4e-12
41dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosp... 80 4e-12
42dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 78 2e-11
43gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 72 1e-09
44gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph... 72 1e-09
45gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi... 72 1e-09
46gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi... 72 1e-09
47gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ... 72 1e-09
48gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos... 72 1e-09
49gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo... 72 1e-09
50dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for rib... 72 1e-09
51dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 72 1e-09
52dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 72 1e-09
53dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 72 1e-09
54dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 72 1e-09
55gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bi... 66 6e-08
56gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph... 66 6e-08
57gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca... 66 6e-08
58gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha... 66 6e-08
59gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat... 64 3e-07
60dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c... 64 3e-07
61gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate... 62 1e-06
62gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp... 62 1e-06
63dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
64dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 4e-06
66emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523... 60 4e-06
67gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp... 58 2e-05
68gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca... 58 2e-05
69gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos... 58 2e-05
70gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat... 58 2e-05
71gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat... 54 2e-04
72dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
73dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
74gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi... 50 0.004
75gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate... 50 0.004
76gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complet... 46 0.059
77dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.059
78dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.059
79dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.059
80dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.059
81emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.059
82gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisp... 46 0.059
83dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mR... 46 0.059
84gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1... 44 0.23
85dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.23
86dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.23
87dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mR... 44 0.23
88emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chro... 42 0.93
89emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on ch... 42 0.93
90gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosom... 40 3.7
91gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome ... 40 3.7
92gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete s... 40 3.7
93gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, co... 40 3.7
94emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in ... 40 3.7
95dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 3.7 
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score =  234 bits (118), Expect = 1e-58
 Identities = 238/279 (85%), Gaps = 8/279 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    cgcttgttgtatnttataantatggcacaggtgttgtgtatgtgtaggccgtgctagaat 60
            |||||||||||| | |||| |||  ||| |||||||| ||||||||| | ||||||||||
Sbjct: 1469 cgcttgttgtatataataaatatcacactggtgttgtatatgtgtagccggtgctagaat 1410

                                                                        
Query: 61   ttacatatgcatatatgctccacaacctatgctcgtacataaacagatcatagngaag-a 119
            ||||||||||||    ||||||||||||||| ||||||| | ||||||||||  |||| |
Sbjct: 1409 ttacatatgcat----gctccacaacctatgttcgtacaaacacagatcataccgaagga 1354

                                                                        
Query: 120  aaattatgctctagtcggaaagcagagtcgnggncaaaagtgaagttcacagaagacctt 179
            ||| |||||||| ||||| ||||||||||  || ||||||||||||||||| |||||  |
Sbjct: 1353 aaaatatgctctggtcgggaagcagagtcctggacaaaagtgaagttcacaaaagacaat 1294

                                                                        
Query: 180  catacgacataggccattgnttcacctcgnagnttatgccttgccggactcctcgcaacc 239
            |||||   ||||||||||| || | |||| || ||| |||||||| ||||||||||||||
Sbjct: 1293 catac---ataggccattgttttaactcgtagtttaggccttgccagactcctcgcaacc 1237

                                                   
Query: 240  cggtggcctgaaggcgatgaagctgncncactgcacctg 278
            |||||||||||| |||||||||||| | |||||||||||
Sbjct: 1236 cggtggcctgaatgcgatgaagctgacgcactgcacctg 1198



 Score =  115 bits (58), Expect = 8e-23
 Identities = 211/261 (80%), Gaps = 9/261 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    cgcttgttgtatnttataantatggcacaggtgttgtgtatgtgtaggccgtgctagaat 60
            |||||| ||||| | |||| |||  || ||||||||| ||||||||| | ||||||||||
Sbjct: 5872 cgcttgctgtatataataaatatcacataggtgttgtatatgtgtagtcagtgctagaat 5813

                                                                        
Query: 61   ttacatatgcatatatgctccacaacctatgctcgtacataaacagatcatagngaa-ga 119
            ||||| |||||     ||||||||||| ||| ||||||||| ||| || |||  ||| ||
Sbjct: 5812 ttacacatgcac----gctccacaaccaatgttcgtacatacacatattatacagaacga 5757

                                                                        
Query: 120  aaattatgctctagtcggaaagcagagtcgnggncaaaagtgaagttcacagaagacctt 179
            ||| |||||||| || || | ||||||||| ||  |||||||||||||||| ||||||||
Sbjct: 5756 aaaatatgctctggtaggca-gcagagtcgtggagaaaagtgaagttcacaaaagacctt 5698

                                                                        
Query: 180  catacgacataggccattgnttcacctcgnagnttatgccttgccggactcctcgcaacc 239
            | |   ||||||||||||| |||| |||  ||  || ||||||||||||||||| |||  
Sbjct: 5697 cgt---acataggccattgtttcaactcatagtctaggccttgccggactcctcacaagt 5641

                                 
Query: 240  cggtggcctgaaggcgatgaa 260
            |||| | ||||||| ||||||
Sbjct: 5640 cggtagactgaaggtgatgaa 5620



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 112/134 (83%), Gaps = 5/134 (3%)
 Strand = Plus / Minus

                                                                        
Query: 37   tgtatgtgtaggccgtgctagaatttacatatgcatatatgctccacaacctatgctcgt 96
            ||||| ||||| | |||||||| |||||| ||||||    ||||||||||||||| | ||
Sbjct: 4487 tgtatatgtagccggtgctagagtttacacatgcat----gctccacaacctatgtttgt 4432

                                                                        
Query: 97   acataaacagatcatagngaagaaaa-ttatgctctagtcggaaagcagagtcgnggnca 155
            ||||| ||||||||||  ||| |||| |||||||   ||||||||||||||||| ||  |
Sbjct: 4431 acatacacagatcatacagaacaaaaattatgcttaggtcggaaagcagagtcgtggaga 4372

                          
Query: 156  aaagtgaagttcac 169
            ||||||||||||||
Sbjct: 4371 aaagtgaagttcac 4358
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>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
            gene, exons 1 and 2
          Length = 2205

 Score =  167 bits (84), Expect = 2e-38
 Identities = 119/133 (89%)
 Strand = Plus / Minus

                                                                        
Query: 146  gtcgnggncaaaagtgaagttcacagaagaccttcatacgacataggccattgnttcacc 205
            |||| || ||||||||||||||||| |||| ||||||| || ||||||||||| |||| |
Sbjct: 1576 gtcgtggacaaaagtgaagttcacaaaagatcttcatatgagataggccattgtttcaac 1517

                                                                        
Query: 206  tcgnagnttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgn 265
            ||  || ||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1516 tcatagtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctga 1457

                         
Query: 266  cncactgcacctg 278
            | |||||||||||
Sbjct: 1456 cgcactgcacctg 1444
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>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small
           subunit (rbcS gene)
          Length = 518

 Score =  111 bits (56), Expect = 1e-21
 Identities = 60/62 (96%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455

             
Query: 277 tg 278
           ||
Sbjct: 454 tg 453
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>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  103 bits (52), Expect = 3e-19
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactg 272
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||
Sbjct: 614 ttatgccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactg 555

                 
Query: 273 cacctg 278
           ||||||
Sbjct: 554 cacctg 549
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>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p13-1
          Length = 985

 Score =  103 bits (52), Expect = 3e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||
Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922

             
Query: 277 tg 278
           ||
Sbjct: 921 tg 920
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>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p10-1
          Length = 629

 Score =  103 bits (52), Expect = 3e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           ||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||
Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566

             
Query: 277 tg 278
           ||
Sbjct: 565 tg 564
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>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase Small subunit, complete cds,
           clone:p6-1
          Length = 638

 Score =  103 bits (52), Expect = 3e-19
 Identities = 59/62 (95%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||
Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575

             
Query: 277 tg 278
           ||
Sbjct: 574 tg 573
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||
Sbjct: 489 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 430

             
Query: 277 tg 278
           ||
Sbjct: 429 tg 428
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||
Sbjct: 63  gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 4

             
Query: 277 tg 278
           ||
Sbjct: 3   tg 2
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>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p9-1
          Length = 739

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||
Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676

             
Query: 277 tg 278
           ||
Sbjct: 675 tg 674
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>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p2-1
          Length = 653

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||
Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590

             
Query: 277 tg 278
           ||
Sbjct: 589 tg 588
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>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Hor-A
          Length = 605

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctgccg 281
           |||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 553
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||||||||
Sbjct: 338 gccttgccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcactgcacc 279

             
Query: 277 tg 278
           ||
Sbjct: 278 tg 277
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>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B2
          Length = 781

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 732
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>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-B
          Length = 787

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 738
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>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ura-B
          Length = 787

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 738
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>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-B
          Length = 781

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 732
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>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-B
          Length = 728

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 679
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>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-B
          Length = 792

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 743
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>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-B
          Length = 792

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 743
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>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-B
          Length = 787

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 738
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>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Agr-A
          Length = 604

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 555
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>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-A
          Length = 604

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 555
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>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-A
          Length = 605

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-A
          Length = 605

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A3
          Length = 605

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A2
          Length = 605

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A1
          Length = 605

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
          Length = 845

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactg 272
           ||||||||||||||| |||||||| |  |||||||||||||| ||||||||| | |||||
Sbjct: 595 ttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcactg 536

                 
Query: 273 cacctg 278
           ||||||
Sbjct: 535 cacctg 530
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           |||||||||||||||||||| ||||||||| || |||||||||||||| |  ||||||||
Sbjct: 570 gccttgccggactcctcgcagcccggtggcttggaggcgatgaagctgacggactgcacc 511

             
Query: 277 tg 278
           ||
Sbjct: 510 tg 509
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>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-B
          Length = 789

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                         
Query: 233 cgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 785 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 740
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>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B1
          Length = 787

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctg 738
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>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-B
          Length = 772

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 723
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>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-A
          Length = 591

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctg 542
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>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-A
          Length = 605

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-A
          Length = 605

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 556
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>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-A
          Length = 611

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||||| ||||||||||||||| | |||||||||||
Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctg 562
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>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A2
          Length = 604

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 555
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>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A1
          Length = 604

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 555
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>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe2-A
          Length = 604

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||||||||||||||||||| |||||||| | |||||||||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctg 555
to top
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bro-B
          Length = 784

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctg 735
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>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-B
          Length = 783

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 234 gcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 783 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctg 739
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>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactg 272
           |||||||||||| ||||||| ||| || |||||| |||| |||||||||||| | |||||
Sbjct: 548 ttatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagctgacgcactg 489

                 
Query: 273 cacctg 278
           ||||||
Sbjct: 488 cacctg 483
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>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| ||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
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>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| ||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
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>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| ||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
to top
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| ||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
to top
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, partial cds
          Length = 504

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| ||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
to top
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, complete cds
          Length = 779

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacc 276
           ||||||||||| |||||||| || |||||||||||||| ||||||||| | || ||||||
Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522

             
Query: 277 tg 278
           ||
Sbjct: 521 tg 520
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>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-B
          Length = 787

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||||||||||||  |||||||||||||| | |||||||||||
Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctg 738
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>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-A
          Length = 607

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||| ||||||||||||||| | |||||||||||
Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctg 558
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>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A3
          Length = 604

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||| ||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctg 555
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>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-A1
          Length = 604

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||| ||| | |||||||||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctg 555
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>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds
          Length = 604

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||||||||| |||||||||||||||||||| ||| | |||||||||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctg 555
to top
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 232 tcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           ||||| ||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctg 448
to top
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| ||||||||| ||||||||||||||||| | ||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcac 451
to top
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| ||||||||| ||||||||||||||||| | ||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcac 451
to top
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| ||||||||| ||||||||||||||||| | ||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcac 451
to top
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| || |||||| ||||||||||||||||| | |||||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctg 448
to top
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ave-A
          Length = 590

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctg 278
           |||||||| || |||||| ||||||||||||||||| | |||||||||||
Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctg 541
to top
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, partial cds
          Length = 620

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 223 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           ||||| |||||||| ||||||||| |||| |||||||||||| | ||||||||
Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcac 567
to top
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 586

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 223 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           ||||| |||||||| || |||||| ||||||||||||||||| | ||||||||
Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcac 533
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 222      gccggactcctcgcaacccggtggcctgaaggcgatgaagct 263
                ||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 11276924



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 226      gactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctgcc 280
                ||||||||||||||||||||| |  | ||||||||||||    ||||||||||||
Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcc 11320054



 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 226      gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
                ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctg 10079821



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 226      gactcctcgcaacccggtggcctgaaggcgatgaagct 263
                |||||||||||||| || ||| || |||||||||||||
Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagct 11262261
to top
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full
           insert sequence
          Length = 947

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 222 gccggactcctcgcaacccggtggcctgaaggcgatgaagct 263
           ||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 546
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 222      gccggactcctcgcaacccggtggcctgaaggcgatgaagct 263
                ||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 11276595



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 226      gactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctgcc 280
                ||||||||||||||||||||| |  | ||||||||||||    ||||||||||||
Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcc 11319725



 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 226      gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
                ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctg 10079706



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 226      gactcctcgcaacccggtggcctgaaggcgatgaagct 263
                |||||||||||||| || ||| || |||||||||||||
Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagct 11261932
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>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127267

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 222   gccggactcctcgcaacccggtggcctgaaggcgatgaagct 263
             ||||||||||||||||||||| ||| || |||||||||||||
Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 95130



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 226   gactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctgcc 280
             ||||||||||||||||||||| |  | ||||||||||||    ||||||||||||
Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcc 52000



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 226    gactcctcgcaacccggtggcctgaaggcgatgaagct 263
              |||||||||||||| || ||| || |||||||||||||
Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagct 109793
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>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 600

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| || |||||| ||||||||||||||||| | ||||||||
Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcac 547
to top
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 594

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| || |||||| ||||||||||||||||| | ||||||||
Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcac 541
to top
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, nuclear gene
           encoding chloroplast protein, partial cds
          Length = 504

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| ||||||||| ||||||||||||| ||| | ||||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcac 451
to top
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| || |||||| ||||||||||||||||| | ||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcac 451
to top
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 593

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 223 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           ||||| |||||||| || |||||| |||| |||||||||||| | ||||||||
Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcac 540
to top
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full
           insert sequence
          Length = 845

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctgcc 280
           ||||||||||||||||||||| |  | ||||||||||||    ||||||||||||
Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcc 525
to top
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full
           insert sequence
          Length = 1999

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcacctgcc 280
           ||||||||||||||||||||| |  | ||||||||||||    ||||||||||||
Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcc 527
to top
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| || |||||| |||| |||||||||||| | ||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcac 451
to top
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 229 tcctcgcaacccggtggcctgaaggcgatgaagctgncncactgcac 275
           |||||||| || |||||| |||| |||||||||||| | ||||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcac 451
to top
>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence
          Length = 152251

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 56     agaatttacatatgcatatatgc 78
              |||||||||||||||||||||||
Sbjct: 124176 agaatttacatatgcatatatgc 124198
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>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full
           insert sequence
          Length = 984

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
           ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctg 687
to top
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full
           insert sequence
          Length = 828

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
           ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctg 533
to top
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full
           insert sequence
          Length = 2409

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
           ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctg 534
to top
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full
           insert sequence
          Length = 830

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
           ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctg 536
to top
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145890

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 226   gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
             ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctg 82800
to top
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate
           carboxylase/oxygenase (rbcS) mRNA, complete cds
          Length = 808

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
           ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctg 511
to top
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
           of ribulose-1,5-bisphosphate carboxylase, complete cds,
           clone pOSSS1139
          Length = 830

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagctg 264
           ||||||||||| ||||| ||| || ||||||||||||||
Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctg 531
to top
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit mRNA, complete cds;
           chloroplast
          Length = 860

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagct 263
           |||||||||||||| || ||| || |||||||||||||
Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagct 529
to top
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full
           insert sequence
          Length = 899

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagct 263
           |||||||||||||| || ||| || |||||||||||||
Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagct 546
to top
>dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F10, full
           insert sequence
          Length = 418

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagct 263
           |||||||||||||| || ||| || |||||||||||||
Sbjct: 61  gactcctcgcaacctgggggcttgtaggcgatgaagct 24
to top
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
           of ribulose-1,5-bisphosphate carboxylase, complete cds,
           clone pOSSS2106
          Length = 895

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 226 gactcctcgcaacccggtggcctgaaggcgatgaagct 263
           |||||||||||||| || ||| || |||||||||||||
Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagct 544
to top
>emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chromosome 4, complete
             sequence
          Length = 70508

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    aatttacatatgcatatatgc 78
             |||||||||||||||||||||
Sbjct: 46373 aatttacatatgcatatatgc 46393
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>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete
              sequence
          Length = 228428

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     gaatttacatatgcatatatg 77
              |||||||||||||||||||||
Sbjct: 158744 gaatttacatatgcatatatg 158764
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>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete
             sequence
          Length = 208603

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atttacatatgcatatatgc 78
             ||||||||||||||||||||
Sbjct: 85767 atttacatatgcatatatgc 85748
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>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence
          Length = 195446

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     atttacatatgcatatatgc 78
              ||||||||||||||||||||
Sbjct: 152904 atttacatatgcatatatgc 152885
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>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence
          Length = 144217

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   tcctcgcaacccggtggcct 248
             ||||||||||||||||||||
Sbjct: 57925 tcctcgcaacccggtggcct 57944
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>gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, complete sequence
          Length = 173729

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    tacatatgcatatatgctccacaa 85
             ||||||||||||||| ||||||||
Sbjct: 56450 tacatatgcatatattctccacaa 56427
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>emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in linkage group 14,
             complete sequence
          Length = 181055

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ttacatatgcatatatgctc 80
             ||||||||||||||||||||
Sbjct: 42670 ttacatatgcatatatgctc 42651
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     gcctgaaggcgatgaagctg 264
               ||||||||||||||||||||
Sbjct: 2694162 gcctgaaggcgatgaagctg 2694143


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,933,745
Number of Sequences: 3902068
Number of extensions: 1933745
Number of successful extensions: 34320
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34175
Number of HSP's gapped (non-prelim): 139
length of query: 281
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 259
effective length of database: 17,147,199,772
effective search space: 4441124740948
effective search space used: 4441124740948
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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