ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62n05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477156.1| Oryza sativa (japonica cultivar-group), mRNA 502 e-139
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
3dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
4ref|NM_120602.2| Arabidopsis thaliana unknown protein AT5G05200 ... 105 2e-19
5gb|AY063020.1| Arabidopsis thaliana unknown protein (At5g05200) ... 105 2e-19
6gb|AY035149.1| Arabidopsis thaliana unknown protein (At5g05200) ... 105 2e-19
7gb|AY133554.1| Arabidopsis thaliana At5g05200/K2A11_7 mRNA, comp... 105 2e-19
8gb|AY093317.1| Arabidopsis thaliana unknown protein (K2A11.7) mR... 105 2e-19
9gb|AF361613.1| Arabidopsis thaliana AT5g05200/K2A11_7 mRNA, comp... 105 2e-19
10gb|AY059866.1| Arabidopsis thaliana Unknown protein (K2A11.7) mR... 105 2e-19
11emb|BX831944.1|CNS0A11V Arabidopsis thaliana Full-length cDNA Co... 105 2e-19
12dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 64 7e-07
13gb|DQ226644.1| Boechera divaricarpa isolate SLW-5-E07 mRNA sequence 62 3e-06
14gb|AC111132.7| Mus musculus chromosome 3, clone RP23-340B7, comp... 44 0.61
15dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 44 0.61
16gb|AC104697.2| Homo sapiens BAC clone RP11-454B3 from 2, complet... 44 0.61
17gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, comp... 42 2.4
18ref|XM_418746.1| PREDICTED: Gallus gallus similar to DNA-binding... 42 2.4
19ref|NG_003738.1| Rattus norvegicus olfactory receptor pseudogene... 42 2.4
20gb|AC158576.3| Mus musculus chromosome 7, clone RP24-252B21, com... 42 2.4
21gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, comp... 42 2.4
22dbj|AK083338.1| Mus musculus 2 days neonate thymus thymic cells ... 42 2.4
23gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, co... 42 2.4
24emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in l... 42 2.4
25gb|AC140840.3| Mus musculus BAC clone RP24-545K17 from 13, compl... 42 2.4
26gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 9.6
27gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, co... 40 9.6
28gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, comple... 40 9.6
29gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, com... 40 9.6
30gb|AC087430.3| Homo sapiens chromosome 3 clone RP11-242C8 map 3p... 40 9.6
31emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on ch... 40 9.6
32emb|AL031285.1|HS58A9 Human DNA sequence from clone RP1-58A9 on ... 40 9.6
33gb|AC164298.2| Mus musculus BAC clone RP23-347H20 from chromosom... 40 9.6
34emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 9.6
35emb|BX284749.1|NCB10C3 Neurospora crassa DNA linkage group II BA... 40 9.6
36gb|AC099552.6| Homo sapiens BAC clone RP11-1430O6 from 7, comple... 40 9.6
37ref|NM_001017465.1| Rattus norvegicus similar to solute carrier ... 40 9.6
38emb|BX294178.13| Zebrafish DNA sequence from clone CH211-271C18 ... 40 9.6
39gb|BC079349.1| Rattus norvegicus similar to solute carrier famil... 40 9.6
40gb|AC092875.2| Sus scrofa clone RP44-476K1, complete sequence 40 9.6
41gb|AC027123.7| Homo sapiens chromosome 3 clone RP11-392M7 map 3p... 40 9.6
42emb|Z17126.1|HS248ZC1 H. sapiens (D19S225) DNA segment containin... 40 9.6
43gb|AC155257.1| Mus musculus BAC clone RP24-109N5 from 16, comple... 40 9.6
44emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in... 40 9.6
45gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (C... 40 9.6
46emb|BX571725.1| Carp DNA sequence from clone carpf-118, complete... 40 9.6
47gb|BC078940.1| Rattus norvegicus solute carrier family 7 (cation... 40 9.6
48gb|AC173289.2| Medicago truncatula chromosome 2 BAC clone mth2-3... 40 9.6
49ref|NM_001011948.1| Rattus norvegicus solute carrier family 7 (c... 40 9.6
50emb|CT010573.10| Mouse DNA sequence from clone RP23-238K22 on ch... 40 9.6 
>ref|XM_477156.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1698

 Score =  502 bits (253), Expect = e-139
 Identities = 430/489 (87%)
 Strand = Plus / Minus

                                                                        
Query: 135  atgttaatcctctcatctctcagcatgttcatgctgggagccagcagtctcgtgtaccga 194
            ||||||| ||||||||||| ||||||||||||||||||||||| || ||| ||||| |||
Sbjct: 1655 atgttaaccctctcatctcgcagcatgttcatgctgggagccaacaatcttgtgtagcga 1596

                                                                        
Query: 195  tcaaaataaagaagctgcttcatgagaagagcgaattccctaggaaatttcagcccgtat 254
            |||||||| |||||||||||||| |||||||||||||| | |||||||||||  || || 
Sbjct: 1595 tcaaaatacagaagctgcttcatcagaagagcgaattcgcgaggaaatttcaatccatac 1536

                                                                        
Query: 255  gactcgctaacccttaccagatcaagaaacagtgcattcatctgcctctcgtctacaaca 314
            |||||||| ||||| |||||||||||||||| |||||||||||| |||||||| || |||
Sbjct: 1535 gactcgctgaccctcaccagatcaagaaacaatgcattcatctgtctctcgtcaacgaca 1476

                                                                        
Query: 315  acattagcggatacagctgtagcatcagaacttcttgcagctgccactataatttcagta 374
            |||||||| ||||| ||||||||||||| | ||||||| | ||| ||||| | |||||||
Sbjct: 1475 acattagccgatactgctgtagcatcaggagttcttgctgttgcaactatgacttcagta 1416

                                                                        
Query: 375  tccaactcctgtagcgatgagaatatcttttgcaagtcctttgcaaaggagtcaacatct 434
            ||||| |||||||  ||||||||||| |||| |||||||||||||||    | ||||| |
Sbjct: 1415 tccaaatcctgtattgatgagaatattttttccaagtcctttgcaaattcattaacattt 1356

                                                                        
Query: 435  atatcattccctgtagcacccatttcggaaagggccgatgccatagcattgtaatcctca 494
            |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||
Sbjct: 1355 atatcattccctgtagcacccatttcagaaagggctgatgccatagcattataatcgtca 1296

                                                                        
Query: 495  gttgcgaaagaagccaagaagatctccatagcagcccatgtccttgaggatattcgacca 554
            ||||| || |||||||| |||| |||||| |||||||| |||||||  ||||| || |||
Sbjct: 1295 gttgcaaatgaagccaaaaagacctccattgcagcccaggtccttggcgatatccggcca 1236

                                                                        
Query: 555  acaattccaaaatcaataaatccaacacgtccatcacgaagcaaccataggtttcctgca 614
            |||||||||||||||| |||||||||||||||||| || ||||||||||  |||||||||
Sbjct: 1235 acaattccaaaatcaagaaatccaacacgtccatctcggagcaaccataaatttcctgca 1176

                     
Query: 615  tgcacatcc 623
            |||||||||
Sbjct: 1175 tgcacatcc 1167



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 658  accagacattgagggcagtgactaaagtcaactcaggatcagga 701
            |||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 1126 accagacattaagtgcagtgactaaagtcagctcaggatcagga 1083
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  168 bits (85), Expect = 2e-38
 Identities = 151/173 (87%)
 Strand = Plus / Plus

                                                                           
Query: 390     gatgagaatatcttttgcaagtcctttgcaaaggagtcaacatctatatcattccctgta 449
               ||||||||||| |||| |||||||||||||||    | ||||| ||||||||||||||||
Sbjct: 7186121 gatgagaatattttttccaagtcctttgcaaattcattaacatttatatcattccctgta 7186180

                                                                           
Query: 450     gcacccatttcggaaagggccgatgccatagcattgtaatcctcagttgcgaaagaagcc 509
               ||||||||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 7186181 gcacccatttcagaaagggctgatgccatagcattataatcgtcagttgcaaatgaagcc 7186240

                                                                    
Query: 510     aagaagatctccatagcagcccatgtccttgaggatattcgaccaacaattcc 562
               || |||| |||||| |||||||| |||||||  ||||| || |||||||||||
Sbjct: 7186241 aaaaagacctccattgcagcccaggtccttggcgatatccggccaacaattcc 7186293



 Score =  151 bits (76), Expect = 4e-33
 Identities = 94/100 (94%)
 Strand = Plus / Plus

                                                                           
Query: 561     ccaaaatcaataaatccaacacgtccatcacgaagcaaccataggtttcctgcatgcaca 620
               |||||||||| |||||||||||||||||| || ||||||||||  |||||||||||||||
Sbjct: 7186478 ccaaaatcaagaaatccaacacgtccatctcggagcaaccataaatttcctgcatgcaca 7186537

                                                       
Query: 621     tccgcatggaaggattcacatgaaatcaagcttccaaacc 660
               || |||||||||||||||||||||||||||||||||||||
Sbjct: 7186538 tctgcatggaaggattcacatgaaatcaagcttccaaacc 7186577



 Score =  147 bits (74), Expect = 6e-32
 Identities = 119/134 (88%)
 Strand = Plus / Plus

                                                                           
Query: 135     atgttaatcctctcatctctcagcatgttcatgctgggagccagcagtctcgtgtaccga 194
               ||||||| ||||||||||| ||||||||||||||||||||||| || ||| ||||| |||
Sbjct: 7185266 atgttaaccctctcatctcgcagcatgttcatgctgggagccaacaatcttgtgtagcga 7185325

                                                                           
Query: 195     tcaaaataaagaagctgcttcatgagaagagcgaattccctaggaaatttcagcccgtat 254
               |||||||| |||||||||||||| |||||||||||||| | |||||||||||  || || 
Sbjct: 7185326 tcaaaatacagaagctgcttcatcagaagagcgaattcgcgaggaaatttcaatccatac 7185385

                             
Query: 255     gactcgctaaccct 268
               |||||||| |||||
Sbjct: 7185386 gactcgctgaccct 7185399



 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                           
Query: 270     accagatcaagaaacagtgcattcatctgcctctcgtctacaacaacattagcggataca 329
               |||||||||||||||| |||||||||||| |||||||| || ||||||||||| ||||| 
Sbjct: 7185583 accagatcaagaaacaatgcattcatctgtctctcgtcaacgacaacattagccgatact 7185642

                                                                       
Query: 330     gctgtagcatcagaacttcttgcagctgccactataatttcagtatccaactcctg 385
               ||||||||||||| | ||||||| | ||| ||||| | |||||||||||| |||||
Sbjct: 7185643 gctgtagcatcaggagttcttgctgttgcaactatgacttcagtatccaaatcctg 7185698



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                           
Query: 658     accagacattgagggcagtgactaaagtcaactcaggatcagga 701
               |||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 7186689 accagacattaagtgcagtgactaaagtcagctcaggatcagga 7186732
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>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0016A21
          Length = 144076

 Score =  168 bits (85), Expect = 2e-38
 Identities = 151/173 (87%)
 Strand = Plus / Plus

                                                                         
Query: 390   gatgagaatatcttttgcaagtcctttgcaaaggagtcaacatctatatcattccctgta 449
             ||||||||||| |||| |||||||||||||||    | ||||| ||||||||||||||||
Sbjct: 26605 gatgagaatattttttccaagtcctttgcaaattcattaacatttatatcattccctgta 26664

                                                                         
Query: 450   gcacccatttcggaaagggccgatgccatagcattgtaatcctcagttgcgaaagaagcc 509
             ||||||||||| |||||||| |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 26665 gcacccatttcagaaagggctgatgccatagcattataatcgtcagttgcaaatgaagcc 26724

                                                                  
Query: 510   aagaagatctccatagcagcccatgtccttgaggatattcgaccaacaattcc 562
             || |||| |||||| |||||||| |||||||  ||||| || |||||||||||
Sbjct: 26725 aaaaagacctccattgcagcccaggtccttggcgatatccggccaacaattcc 26777



 Score =  151 bits (76), Expect = 4e-33
 Identities = 94/100 (94%)
 Strand = Plus / Plus

                                                                         
Query: 561   ccaaaatcaataaatccaacacgtccatcacgaagcaaccataggtttcctgcatgcaca 620
             |||||||||| |||||||||||||||||| || ||||||||||  |||||||||||||||
Sbjct: 26962 ccaaaatcaagaaatccaacacgtccatctcggagcaaccataaatttcctgcatgcaca 27021

                                                     
Query: 621   tccgcatggaaggattcacatgaaatcaagcttccaaacc 660
             || |||||||||||||||||||||||||||||||||||||
Sbjct: 27022 tctgcatggaaggattcacatgaaatcaagcttccaaacc 27061



 Score =  147 bits (74), Expect = 6e-32
 Identities = 119/134 (88%)
 Strand = Plus / Plus

                                                                         
Query: 135   atgttaatcctctcatctctcagcatgttcatgctgggagccagcagtctcgtgtaccga 194
             ||||||| ||||||||||| ||||||||||||||||||||||| || ||| ||||| |||
Sbjct: 25750 atgttaaccctctcatctcgcagcatgttcatgctgggagccaacaatcttgtgtagcga 25809

                                                                         
Query: 195   tcaaaataaagaagctgcttcatgagaagagcgaattccctaggaaatttcagcccgtat 254
             |||||||| |||||||||||||| |||||||||||||| | |||||||||||  || || 
Sbjct: 25810 tcaaaatacagaagctgcttcatcagaagagcgaattcgcgaggaaatttcaatccatac 25869

                           
Query: 255   gactcgctaaccct 268
             |||||||| |||||
Sbjct: 25870 gactcgctgaccct 25883



 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                         
Query: 270   accagatcaagaaacagtgcattcatctgcctctcgtctacaacaacattagcggataca 329
             |||||||||||||||| |||||||||||| |||||||| || ||||||||||| ||||| 
Sbjct: 26067 accagatcaagaaacaatgcattcatctgtctctcgtcaacgacaacattagccgatact 26126

                                                                     
Query: 330   gctgtagcatcagaacttcttgcagctgccactataatttcagtatccaactcctg 385
             ||||||||||||| | ||||||| | ||| ||||| | |||||||||||| |||||
Sbjct: 26127 gctgtagcatcaggagttcttgctgttgcaactatgacttcagtatccaaatcctg 26182



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 658   accagacattgagggcagtgactaaagtcaactcaggatcagga 701
             |||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 27173 accagacattaagtgcagtgactaaagtcagctcaggatcagga 27216
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>ref|NM_120602.2| Arabidopsis thaliana unknown protein AT5G05200 mRNA, complete cds
          Length = 2279

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1242 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1183

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1182 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1123

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1122 caagcaagtaagcttccaaaccacacatt 1094
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>gb|AY063020.1| Arabidopsis thaliana unknown protein (At5g05200) mRNA, complete cds
          Length = 1654

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1187 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1128

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1127 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1068

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1067 caagcaagtaagcttccaaaccacacatt 1039
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>gb|AY035149.1| Arabidopsis thaliana unknown protein (At5g05200) mRNA, complete cds
          Length = 1832

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1207 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1148

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1147 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1088

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1087 caagcaagtaagcttccaaaccacacatt 1059
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>gb|AY133554.1| Arabidopsis thaliana At5g05200/K2A11_7 mRNA, complete cds
          Length = 1623

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1187 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1128

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1127 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1068

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1067 caagcaagtaagcttccaaaccacacatt 1039
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>gb|AY093317.1| Arabidopsis thaliana unknown protein (K2A11.7) mRNA, complete cds
          Length = 1715

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1187 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1128

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1127 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1068

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1067 caagcaagtaagcttccaaaccacacatt 1039
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>gb|AF361613.1| Arabidopsis thaliana AT5g05200/K2A11_7 mRNA, complete cds
          Length = 1811

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1240 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1181

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1180 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1121

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1120 caagcaagtaagcttccaaaccacacatt 1092
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>gb|AY059866.1| Arabidopsis thaliana Unknown protein (K2A11.7) mRNA, complete cds
          Length = 1818

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1238 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1179

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1178 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1119

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1118 caagcaagtaagcttccaaaccacacatt 1090
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>emb|BX831944.1|CNS0A11V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH40ZG10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1715

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  tccatagcagcccatgtccttgaggatattcgaccaacaattccaaaatcaataaatcca 578
            |||||||||||||||||  | | |||||| ||||||||||| |||||||||| ||| |||
Sbjct: 1189 tccatagcagcccatgttttgggggatatccgaccaacaatgccaaaatcaagaaaccca 1130

                                                                        
Query: 579  acacgtccatcacgaagcaaccataggtttcctgcatgcacatccgcatggaaggattca 638
            |  || |||||||| | || ||||| |||||||||||| ||||| |||||||||  ||||
Sbjct: 1129 atccggccatcacgcaacagccataagtttcctgcatgtacatcagcatggaagctttca 1070

                                         
Query: 639  catgaaatcaagcttccaaaccagacatt 667
            || | ||  |||||||||||||| |||||
Sbjct: 1069 caagcaagtaagcttccaaaccacacatt 1041
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>dbj|AB018111.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A11
          Length = 29292

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 83/100 (83%)
 Strand = Plus / Plus

                                                                         
Query: 561   ccaaaatcaataaatccaacacgtccatcacgaagcaaccataggtttcctgcatgcaca 620
             |||||||||| ||| ||||  || |||||||| | || ||||| |||||||||||| |||
Sbjct: 25735 ccaaaatcaagaaacccaatccggccatcacgcaacagccataagtttcctgcatgtaca 25794

                                                     
Query: 621   tccgcatggaaggattcacatgaaatcaagcttccaaacc 660
             || |||||||||  |||||| | ||  |||||||||||||
Sbjct: 25795 tcagcatggaagctttcacaagcaagtaagcttccaaacc 25834



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 519   tccatagcagcccatgtccttgaggatattcgaccaacaat 559
             |||||||||||||||||  | | |||||| |||||||||||
Sbjct: 25533 tccatagcagcccatgttttgggggatatccgaccaacaat 25573
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>gb|DQ226644.1| Boechera divaricarpa isolate SLW-5-E07 mRNA sequence
          Length = 693

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 64/75 (85%)
 Strand = Plus / Plus

                                                                       
Query: 542 ggatattcgaccaacaattccaaaatcaataaatccaacacgtccatcacgaagcaacca 601
           |||||| ||||||||||| |||||||||| ||| ||||  || |||||||| | || |||
Sbjct: 618 ggatatacgaccaacaatgccaaaatcaagaaacccaatccggccatcacgcaacagcca 677

                          
Query: 602 taggtttcctgcatg 616
           || ||||||||||||
Sbjct: 678 taagtttcctgcatg 692



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                       
Query: 180 agtctcgtgtaccgatcaaaataaagaagctgcttcatgagaagagcgaattccctagga 239
           ||||||||||| ||||| ||||| |||||||||||||  ||||| || || || || || 
Sbjct: 250 agtctcgtgtatcgatcgaaatacagaagctgcttcaatagaagtgcaaactctcttggg 309

                                     
Query: 240 aatttcagcccgtatgactcgctaac 265
           || || ||||| ||||| ||||||||
Sbjct: 310 aacttaagcccatatgattcgctaac 335
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>gb|AC111132.7| Mus musculus chromosome 3, clone RP23-340B7, complete sequence
          Length = 205647

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 9      aaattatatacagttctagcat 30
              ||||||||||||||||||||||
Sbjct: 129551 aaattatatacagttctagcat 129530
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete
               genome
          Length = 2516575

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 201     taaagaagctgcttcatgagaa 222
               ||||||||||||||||||||||
Sbjct: 1468869 taaagaagctgcttcatgagaa 1468890
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>gb|AC104697.2| Homo sapiens BAC clone RP11-454B3 from 2, complete sequence
          Length = 159797

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 271    ccagatcaagaaacagtgcatt 292
              ||||||||||||||||||||||
Sbjct: 122705 ccagatcaagaaacagtgcatt 122726
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>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence
          Length = 236139

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 602    taggtttcctgcatgcacatc 622
              |||||||||||||||||||||
Sbjct: 216072 taggtttcctgcatgcacatc 216092
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>ref|XM_418746.1| PREDICTED: Gallus gallus similar to DNA-binding protein SATB1
            (Special AT-rich sequence binding protein 1) (LOC420647),
            mRNA
          Length = 3177

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 340  cagaacttcttgcagctgcca 360
            |||||||||||||||||||||
Sbjct: 1316 cagaacttcttgcagctgcca 1336
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>ref|NG_003738.1| Rattus norvegicus olfactory receptor pseudogene 570 (Olr570-ps) on
           chromosome 3
          Length = 962

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 632 ggattcacatgaaatcaagct 652
           |||||||||||||||||||||
Sbjct: 606 ggattcacatgaaatcaagct 586
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>gb|AC158576.3| Mus musculus chromosome 7, clone RP24-252B21, complete sequence
          Length = 181195

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 602    taggtttcctgcatgcacatc 622
              |||||||||||||||||||||
Sbjct: 147250 taggtttcctgcatgcacatc 147230
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>gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, complete sequence
          Length = 211533

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    acactagaaccaattcattct 113
             |||||||||||||||||||||
Sbjct: 93615 acactagaaccaattcattct 93595
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>dbj|AK083338.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:C920009A07
            product:interleukin 16, full insert sequence
          Length = 2605

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 602  taggtttcctgcatgcacatc 622
            |||||||||||||||||||||
Sbjct: 1302 taggtttcctgcatgcacatc 1322
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>gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, complete sequence
          Length = 209515

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 107    tcattctctggtctgcttgct 127
              |||||||||||||||||||||
Sbjct: 170164 tcattctctggtctgcttgct 170184
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>emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in linkage group 16,
             complete sequence
          Length = 226271

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 555   acaattccaaaatcaataaatccaa 579
             |||||||| ||||||||||||||||
Sbjct: 31296 acaattcctaaatcaataaatccaa 31320
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>gb|AC140840.3| Mus musculus BAC clone RP24-545K17 from 13, complete sequence
          Length = 178416

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 627   tggaaggattcacatgaaatcaagc 651
             ||||||||||| |||||||||||||
Sbjct: 84540 tggaaggattcccatgaaatcaagc 84516
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    cttaccagatcaagaaacag 286
              ||||||||||||||||||||
Sbjct: 374764 cttaccagatcaagaaacag 374745
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>gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, complete sequence
          Length = 189211

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    cttaccagatcaagaaacag 286
              ||||||||||||||||||||
Sbjct: 109799 cttaccagatcaagaaacag 109780
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>gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, complete sequence
          Length = 144491

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 611   tgcatgcacatccgcatggaagga 634
             |||||||||||||||| |||||||
Sbjct: 59271 tgcatgcacatccgcagggaagga 59248
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>gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, complete sequence
          Length = 224534

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 429    acatctatatcattccctgt 448
              ||||||||||||||||||||
Sbjct: 163061 acatctatatcattccctgt 163080
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>gb|AC087430.3| Homo sapiens chromosome 3 clone RP11-242C8 map 3p, complete sequence
          Length = 152289

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    gagtcaacatctatatcatt 442
              ||||||||||||||||||||
Sbjct: 134467 gagtcaacatctatatcatt 134486
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>emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on chromosome 6p23-24.3
             Contains the gene for a novel protein isentical to
             ribosomal protein L15 (RPL15), complete sequence
          Length = 190223

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 399   atcttttgcaagtcctttgcaaag 422
             ||||||||||||||||||| ||||
Sbjct: 27832 atcttttgcaagtcctttgaaaag 27855
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>emb|AL031285.1|HS58A9 Human DNA sequence from clone RP1-58A9 on chromosome 1q24.1-24.3
             Contains STSs, GSSs, genomic marker D1S210 and a ca repeat
             polymorphism, complete sequence
          Length = 126347

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 592   gaagcaaccataggtttcct 611
             ||||||||||||||||||||
Sbjct: 41703 gaagcaaccataggtttcct 41684
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>gb|AC164298.2| Mus musculus BAC clone RP23-347H20 from chromosome 14, complete
             sequence
          Length = 203395

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   aaacagtgcattcatctgcc 300
             ||||||||||||||||||||
Sbjct: 58928 aaacagtgcattcatctgcc 58909
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     ggatacagctgtagcatcag 342
               ||||||||||||||||||||
Sbjct: 2761178 ggatacagctgtagcatcag 2761159
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>emb|BX284749.1|NCB10C3 Neurospora crassa DNA linkage group II BAC clone B10C3
          Length = 71352

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  aacatctatatcattccctg 447
            ||||||||||||||||||||
Sbjct: 5738 aacatctatatcattccctg 5757
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>gb|AC099552.6| Homo sapiens BAC clone RP11-1430O6 from 7, complete sequence
          Length = 165873

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 611   tgcatgcacatccgcatggaagga 634
             |||||||||||||||| |||||||
Sbjct: 30262 tgcatgcacatccgcagggaagga 30239
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>ref|NM_001017465.1| Rattus norvegicus similar to solute carrier family 7 (cationic
           amino acid transporter, y+ system), member 12
           (LOC361914), mRNA
          Length = 1784

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 aacaattccaaaatcaataa 573
           ||||||||||||||||||||
Sbjct: 773 aacaattccaaaatcaataa 792
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>emb|BX294178.13| Zebrafish DNA sequence from clone CH211-271C18 in linkage group 7,
              complete sequence
          Length = 131441

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    ctcatctctcagcatgttca 165
              ||||||||||||||||||||
Sbjct: 106453 ctcatctctcagcatgttca 106434
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>gb|BC079349.1| Rattus norvegicus similar to solute carrier family 7 (cationic
           amino acid transporter, y+ system), member 12, mRNA
           (cDNA clone MGC:94806 IMAGE:7107785), complete cds
          Length = 1784

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 aacaattccaaaatcaataa 573
           ||||||||||||||||||||
Sbjct: 773 aacaattccaaaatcaataa 792
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>gb|AC092875.2| Sus scrofa clone RP44-476K1, complete sequence
          Length = 155710

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    gtatgaaattatatacagtt 23
            ||||||||||||||||||||
Sbjct: 2444 gtatgaaattatatacagtt 2425
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>gb|AC027123.7| Homo sapiens chromosome 3 clone RP11-392M7 map 3p, complete sequence
          Length = 191566

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   gagtcaacatctatatcatt 442
             ||||||||||||||||||||
Sbjct: 25542 gagtcaacatctatatcatt 25561
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>emb|Z17126.1|HS248ZC1 H. sapiens (D19S225) DNA segment containing (CA) repeat; clone
           AFM248zc1; single read
          Length = 332

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 cagcatgttcatgctgggag 174
           ||||||||||||||||||||
Sbjct: 41  cagcatgttcatgctgggag 60
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>gb|AC155257.1| Mus musculus BAC clone RP24-109N5 from 16, complete sequence
          Length = 185931

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     aattcctcaaatgatggaca 95
              ||||||||||||||||||||
Sbjct: 143542 aattcctcaaatgatggaca 143561
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>emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in linkage group 13,
              complete sequence
          Length = 220733

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    ctcatctctcagcatgttca 165
              ||||||||||||||||||||
Sbjct: 117755 ctcatctctcagcatgttca 117736
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>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete
             sequence
          Length = 180316

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cagcatgttcatgctgggag 174
             ||||||||||||||||||||
Sbjct: 62351 cagcatgttcatgctgggag 62370
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>emb|BX571725.1| Carp DNA sequence from clone carpf-118, complete sequence
          Length = 38194

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 401   cttttgcaagtcctttgcaa 420
             ||||||||||||||||||||
Sbjct: 28879 cttttgcaagtcctttgcaa 28860
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>gb|BC078940.1| Rattus norvegicus solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 12, mRNA (cDNA clone
           MGC:93774 IMAGE:7109204), complete cds
          Length = 1801

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 aacaattccaaaatcaataa 573
           ||||||||||||||||||||
Sbjct: 773 aacaattccaaaatcaataa 792
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>gb|AC173289.2| Medicago truncatula chromosome 2 BAC clone mth2-33e9, complete sequence
          Length = 127190

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   attccaaaatcaataaatcc 577
             ||||||||||||||||||||
Sbjct: 93794 attccaaaatcaataaatcc 93813
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>ref|NM_001011948.1| Rattus norvegicus solute carrier family 7 (cationic amino acid
           transporter, y+ system), member 12 (Slc7a12), mRNA
          Length = 1801

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 aacaattccaaaatcaataa 573
           ||||||||||||||||||||
Sbjct: 773 aacaattccaaaatcaataa 792
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>emb|CT010573.10| Mouse DNA sequence from clone RP23-238K22 on chromosome 16, complete
              sequence
          Length = 199723

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     aattcctcaaatgatggaca 95
              ||||||||||||||||||||
Sbjct: 106124 aattcctcaaatgatggaca 106143


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,503,076
Number of Sequences: 3902068
Number of extensions: 6503076
Number of successful extensions: 117011
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116812
Number of HSP's gapped (non-prelim): 194
length of query: 701
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 678
effective length of database: 17,143,297,704
effective search space: 11623155843312
effective search space used: 11623155843312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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