>ATC1_DROPS (Q292Q0) Calcium-transporting ATPase sarcoplasmic/endoplasmic|
            reticulum type (EC 3.6.3.8) (Calcium pump)
          Length = 1020

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 224  CAKFQEPKSMVSSLSVLTALGNLHAL--FEETTSTSXMPVRC 105
            C  F +PK+M  +LSVL  +  L+A+    E  S   MP  C
Sbjct: 888  CKIFSDPKAMTMALSVLVTIEMLNAMNSLSENQSLISMPPWC 929

>SAG1_YEAST (P20840) Alpha-agglutinin precursor (AG-alpha-1)|
          Length = 650

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +1

Query: 127 VEVVSSN--NAWRFPRAVNTLNEDTIDFGS 210
           V+V SSN  N W FP++ N  N D   FGS
Sbjct: 230 VQVYSSNDFNDWWFPQSYNDTNADVTCFGS 259

>L_SYNV (P31332) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2116

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 130  EVVSSNNAWRFPRAVNTLNEDTIDFGSWNL 219
            EV+SS   W      + LN+DTI   +W L
Sbjct: 1427 EVISSRMTWVVTLCSHLLNQDTIKHSTWKL 1456


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,329,159
Number of Sequences: 219361
Number of extensions: 1132885
Number of successful extensions: 2605
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2605
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)