>ref|XM_417003.1| PREDICTED: Gallus gallus similar to highwire; PAM; rpm 1
           (LOC418808), mRNA
          Length = 16077

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 266 aggtggctcgttggattcctcttcttcatca 296
           ||||||||| |||||||||||||||||||||
Sbjct: 900 aggtggctctttggattcctcttcttcatca 870

>emb|CR353672.1| Gallus gallus finished cDNA, clone ChEST231o13
          Length = 1096

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 266 aggtggctcgttggattcctcttcttcatca 296
           ||||||||| |||||||||||||||||||||
Sbjct: 568 aggtggctctttggattcctcttcttcatca 538

>ref|NM_015057.2| Homo sapiens MYC binding protein 2 (MYCBP2), mRNA
          Length = 14734

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 270 ggctcgttggattcctcttcttcatca 296
           ||||| |||||||||||||||||||||
Sbjct: 552 ggctctttggattcctcttcttcatca 526

>emb|AL159158.12| Human DNA sequence from clone RP11-81G4 on chromosome 13 Contains the
             5' end of a novel gene (KIAA0916) and two CpG islands,
             complete sequence
          Length = 154682

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 270   ggctcgttggattcctcttcttcatca 296
             ||||| |||||||||||||||||||||
Sbjct: 15043 ggctctttggattcctcttcttcatca 15069

>gb|AF075587.1|AF075587 Homo sapiens protein associated with Myc mRNA, complete cds
          Length = 14807

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 270 ggctcgttggattcctcttcttcatca 296
           ||||| |||||||||||||||||||||
Sbjct: 607 ggctctttggattcctcttcttcatca 581

>gb|AY579201.1| Tetrahymena thermophila DNA topoisomerase type 2 (TOP2A) mRNA,
            complete cds
          Length = 4430

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 281  ttcctcttcttcatcagattca 302
            ||||||||||||||||||||||
Sbjct: 4222 ttcctcttcttcatcagattca 4201

>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06,
             complete sequence
          Length = 179695

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   ttggattcctcttcttcatca 296
             |||||||||||||||||||||
Sbjct: 27655 ttggattcctcttcttcatca 27675

>gb|AC139354.5| Medicago truncatula clone mth1-64n13, complete sequence
          Length = 114031

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 279  gattcctcttcttcatcagat 299
            |||||||||||||||||||||
Sbjct: 8255 gattcctcttcttcatcagat 8275

>gb|AC019205.4| Homo sapiens BAC clone RP11-398K22 from 6, complete sequence
          Length = 198052

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    ggtaactaatcagaggcagaa 82
             |||||||||||||||||||||
Sbjct: 95865 ggtaactaatcagaggcagaa 95885

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 276     ttggattcctcttcttcatca 296
               |||||||||||||||||||||
Sbjct: 7050851 ttggattcctcttcttcatca 7050831

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 276      ttggattcctcttcttcatca 296
                |||||||||||||||||||||
Sbjct: 11944841 ttggattcctcttcttcatca 11944861

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 282      tcctcttcttcatcagattca 302
                |||||||||||||||||||||
Sbjct: 17929939 tcctcttcttcatcagattca 17929919

>dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0520B06
          Length = 142667

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   tcctcttcttcatcagattca 302
             |||||||||||||||||||||
Sbjct: 49774 tcctcttcttcatcagattca 49754

>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1165C09
          Length = 202985

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    ttggattcctcttcttcatca 296
              |||||||||||||||||||||
Sbjct: 168899 ttggattcctcttcttcatca 168879

>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0674B07
          Length = 192191

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   ttggattcctcttcttcatca 296
             |||||||||||||||||||||
Sbjct: 96337 ttggattcctcttcttcatca 96317

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 303     gtgaggccggcggcctggaa 322
               ||||||||||||||||||||
Sbjct: 2138822 gtgaggccggcggcctggaa 2138803

>ref|NM_001031001.1| Gallus gallus serpin peptidase inhibitor, clade B (ovalbumin), member
            3 (SERPINB3), mRNA
          Length = 1972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  attcctcttcttcatcagat 299
            ||||||||||||||||||||
Sbjct: 1162 attcctcttcttcatcagat 1181

>gb|DQ465931.1| Fusarium oxysporum isolate SAT75 translation elongation factor 1a
           gene, partial sequence
          Length = 686

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 ccagagtcgacttggccgat 183
           ||||||||||||||||||||
Sbjct: 48  ccagagtcgacttggccgat 29

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 308     gccggcggcctggaagatgc 327
               ||||||||||||||||||||
Sbjct: 3489405 gccggcggcctggaagatgc 3489386

>gb|J00922.1|CHKY Gallus gallus ovalbumin (oval-Y) gene, complete cds
          Length = 8372

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  attcctcttcttcatcagat 299
            ||||||||||||||||||||
Sbjct: 7457 attcctcttcttcatcagat 7476

>gb|AC105383.3| Homo sapiens BAC clone RP11-9G1 from 4, complete sequence
          Length = 173956

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   attttcattgctctctcact 201
             ||||||||||||||||||||
Sbjct: 96917 attttcattgctctctcact 96898

>gb|AC164661.3| Pan troglodytes BAC clone CH251-11F8 from chromosome unknown, complete
             sequence
          Length = 184521

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    gtaactaatcagaggcagaa 82
             ||||||||||||||||||||
Sbjct: 87780 gtaactaatcagaggcagaa 87761

>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   agcagccacagataatgcgaacct 158
             ||||||||||||||||| ||||||
Sbjct: 23334 agcagccacagataatgagaacct 23311

>gb|AC159826.1| Gallus gallus BAC clone CH261-57J20 from chromosome unknown, complete
              sequence
          Length = 207137

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    attcctcttcttcatcagat 299
              ||||||||||||||||||||
Sbjct: 177383 attcctcttcttcatcagat 177402

>gb|AC157662.2| Gallus gallus BAC clone CH261-183P12 from chromosome unknown, complete
             sequence
          Length = 205302

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   attcctcttcttcatcagat 299
             ||||||||||||||||||||
Sbjct: 54146 attcctcttcttcatcagat 54165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,733,840
Number of Sequences: 3902068
Number of extensions: 2733840
Number of successful extensions: 52305
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52205
Number of HSP's gapped (non-prelim): 100
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)