>AAPQ_RHILV (Q52813) General L-amino acid transport system permease protein|
           aapQ
          Length = 400

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 462 ILASIVIRYTTSKKVRAVLLYNMTIHQLIAPSRRILFLISSFHMYKFIASIKAGGI 295
           +L  +V  +  +  V     +N+T   ++ P    LFL  SF+   FIA I  GGI
Sbjct: 237 LLVFVVSGFPLTFDVPVAGKFNLTGGSVVGPEFMSLFLALSFYTASFIAEIVRGGI 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,602,684
Number of Sequences: 219361
Number of extensions: 1916504
Number of successful extensions: 3584
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3584
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)