>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  108 bits (271), Expect(2) = 1e-43
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 375 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 1e-43
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 241 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 128
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 89.0 bits (219), Expect(2) = 1e-31
 Identities = 42/53 (79%), Positives = 48/53 (90%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 385 QPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 244 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 128
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 85.9 bits (211), Expect(2) = 4e-31
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 385 QPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 4e-31
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 241 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 128
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 85.5 bits (210), Expect(2) = 7e-30
 Identities = 39/53 (73%), Positives = 49/53 (92%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 383 QPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 7e-30
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 241 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 134
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 44/53 (83%), Positives = 50/53 (94%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 372 QPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score = 94.7 bits (234), Expect = 9e-20
 Identities = 44/53 (83%), Positives = 50/53 (94%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 385 QPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 43/53 (81%), Positives = 51/53 (96%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 289
           QPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 375 QPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 41/52 (78%), Positives = 50/52 (96%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 292
           QPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 381 QPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 40/51 (78%), Positives = 49/51 (96%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 295
           QPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 385 QPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 295
           QPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 389 QPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 292
           QPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 389 QPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 37/52 (71%), Positives = 51/52 (98%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 292
           QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 387 QPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 39/49 (79%), Positives = 46/49 (93%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 301
           QPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 384 QPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 37/52 (71%), Positives = 48/52 (92%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 292
           QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 389 QPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 447 QPKMTVEKLLEYGHMLVQEQDNVKRVQL 364
           QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 382 QPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -3

Query: 438 MTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 334
           M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 360 MDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 356 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGC 448
           + +SC+R TL    T  CP  SS +TVI+ C
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTC 449

>TFE2_XENLA (Q01978) Transcription factor E2-alpha (Transcription factor|
           XE12/XE47)
          Length = 658

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -2

Query: 301 FLLRLENSPYTPTI--SCCIGGGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGS 143
           F L + N    PT   S   GGG G ++ T   P G  D N   +D      DG+
Sbjct: 26  FPLPVANGKTRPTTLASTQFGGGSGLEERTGSAPWGTEDHNGSTFDQGRGYGDGT 80

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 145  CRRRSLPLGRSSWHFGRCNLP 207
            CRR   P GR   H GRCN P
Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCP 2134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,970,676
Number of Sequences: 219361
Number of extensions: 1294431
Number of successful extensions: 3380
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3379
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)