Clone Name | rbah62m05 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009584.1| Triticum aestivum clone wre1n.pk0044.b2:fis, full insert mRNA sequence Length = 876 Score = 767 bits (387), Expect = 0.0 Identities = 435/451 (96%) Strand = Plus / Minus Query: 220 gtcagaactccttacgcgagctctataacaagtgcagatgcaccgccaccgccgttgcag 279 |||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 666 gtcagagctccttacgccagctccataacgagcgcagatgcaccgccaccgccgttgcag 607 Query: 280 acaccagcaactccgatcttgccacccttctccctaagaacaccaagaagggtgaccaaa 339 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 606 acaccagcaactccgatcttgccactcttctccctaagaacaccgagaagggtgaccaaa 547 Query: 340 atgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacattt 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 atgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacattt 487 Query: 400 atcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgct 459 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 486 atcttttctgaaggaattccgagaagcttttgatttgcaagtgcaacagccgaaaaggct 427 Query: 460 tcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtgagagccttc 519 ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 426 tcattgatttcataaaaatcaatacgagaggactctaggccagcatttgtgagagccttc 367 Query: 520 ggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcgtcagcaaat 579 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 366 ggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcatcggcaaat 307 Query: 580 cccttgatccttgcaaggacttgcaatccaagttcttgagccttcttcccactcaccaat 639 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 cccttaatccttgcaaggacttgcaatccaagttcttgagccttcttcccactcaccaat 247 Query: 640 actaatgctgcagcgccatcacttatactag 670 |||||||||||||| |||||||||||||||| Sbjct: 246 actaatgctgcagcaccatcacttatactag 216 Score = 125 bits (63), Expect = 2e-25 Identities = 115/131 (87%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 24 aaaacagctacaccagaaaataaaagaacaataaccttgagtaagatcagaaaccggcac 83 |||||||||||| ||||||| |||| || || || |||||||||||||||||||||| Sbjct: 814 aaaacagctacaacagaaaagaaaattgaaacaatctagagtaagatcagaaaccggcac 755 Query: 84 aggagttctaagttaaccaattacttaatctggcacagcactatcaaatgcagtac-tag 142 | ||||||||||||| ||||||||||||||| ||||||||||| |||| |||||| ||| Sbjct: 754 acaagttctaagttaatcaattacttaatctgacacagcactatgaaatacagtacatag 695 Query: 143 aattttacatg 153 ||||||||||| Sbjct: 694 aattttacatg 684 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcaggctccatctttggtgt 209 |||||||||||||||||||| Sbjct: 684 gcaggctccatctttggtgt 665
>ref|XM_450298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 480 bits (242), Expect = e-132 Identities = 374/418 (89%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 312 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1322 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 1263 Query: 313 ctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcct 372 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1262 ctaagaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcct 1203 Query: 373 aaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttga 432 ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1202 aaagacacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttga 1143 Query: 433 tttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgagaggac 492 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 1142 tttgcaagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgagaagac 1083 Query: 493 tctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggtaaatagt 552 || | ||||||||| | |||||||| |||||||||||||| ||| |||||||||||| | Sbjct: 1082 tccaagccagcattagcaagagccttaggtatggcaagtgccgggctagtggtaaataat 1023 Query: 553 tcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagt 612 ||||||||||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||| Sbjct: 1022 tcaggagcttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagt 963 Query: 613 tcttgagccttcttcccactcaccaatactaatgctgcagcgccatcacttatactag 670 ||||| ||||||| ||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 962 tcttgtgccttctgcccactcaccaatactaatgcggcagcaccgtcacttatactag 905
>dbj|AK102536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096I21, full insert sequence Length = 1689 Score = 480 bits (242), Expect = e-132 Identities = 374/418 (89%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 312 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1322 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 1263 Query: 313 ctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcct 372 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1262 ctaagaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcct 1203 Query: 373 aaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttga 432 ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1202 aaagacacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttga 1143 Query: 433 tttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgagaggac 492 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 1142 tttgcaagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgagaagac 1083 Query: 493 tctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggtaaatagt 552 || | ||||||||| | |||||||| |||||||||||||| ||| |||||||||||| | Sbjct: 1082 tccaagccagcattagcaagagccttaggtatggcaagtgccgggctagtggtaaataat 1023 Query: 553 tcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagt 612 ||||||||||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||| Sbjct: 1022 tcaggagcttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagt 963 Query: 613 tcttgagccttcttcccactcaccaatactaatgctgcagcgccatcacttatactag 670 ||||| ||||||| ||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 962 tcttgtgccttctgcccactcaccaatactaatgcggcagcaccgtcacttatactag 905
>dbj|AK059654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C10, full insert sequence Length = 1609 Score = 480 bits (242), Expect = e-132 Identities = 374/418 (89%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 312 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1148 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 1089 Query: 313 ctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcct 372 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1088 ctaagaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcct 1029 Query: 373 aaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttga 432 ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1028 aaagacacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttga 969 Query: 433 tttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgagaggac 492 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 968 tttgcaagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgagaagac 909 Query: 493 tctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggtaaatagt 552 || | ||||||||| | |||||||| |||||||||||||| ||| |||||||||||| | Sbjct: 908 tccaagccagcattagcaagagccttaggtatggcaagtgccgggctagtggtaaataat 849 Query: 553 tcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagt 612 ||||||||||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||| Sbjct: 848 tcaggagcttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagt 789 Query: 613 tcttgagccttcttcccactcaccaatactaatgctgcagcgccatcacttatactag 670 ||||| ||||||| ||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 788 tcttgtgccttctgcccactcaccaatactaatgcggcagcaccgtcacttatactag 731
>gb|AY103699.1| Zea mays PCO140839 mRNA sequence Length = 1749 Score = 430 bits (217), Expect = e-117 Identities = 373/425 (87%) Strand = Plus / Minus Query: 246 aacaagtgcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacc 305 |||||| || ||||| || || ||||||||||||||||||||||| ||||||||||| || Sbjct: 1397 aacaagagctgatgctccacctccgccgttgcagacaccagcaacaccgatcttgccgcc 1338 Query: 306 cttctccctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgg 365 ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 1337 cttttccctaaggacaccaagaagggtgaccaaaatgcgagcaccgctgcacccaagagg 1278 Query: 366 gtgtcctaaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaag 425 || |||| ||| |||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1277 atgccctagagacacagctcctccatggacattaatcttttctgaaggaatcccaagaag 1218 Query: 426 cttttgatttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacg 485 |||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||| | Sbjct: 1217 cttttgatttgcaagtgcgacagcagaaaatgcttcattaatctcaaaaaaatcaacatg 1158 Query: 486 agaggactctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggt 545 || ||||||| |||||||| | | |||||| ||||| |||||||||||||| || || Sbjct: 1157 ggatgactctaatccagcatttgatatagcctttggtatcgcaagtgctggggtggttgt 1098 Query: 546 aaatagttcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaa 605 ||| ||||| |||||||| || || || ||| |||| ||||||||||||||||||||| Sbjct: 1097 aaaaagttccggagcttgagccgcatctgcatatcctctgatccttgcaaggacttgcag 1038 Query: 606 tccaagttcttgagccttcttcccactcaccaatactaatgctgcagcgccatcacttat 665 ||||| ||||||||||||| |||||||||||| |||||||| || || ||||||||||| Sbjct: 1037 gccaagctcttgagccttctgcccactcaccaaaactaatgcagccgccccatcacttat 978 Query: 666 actag 670 ||||| Sbjct: 977 actag 973
>gb|AF113522.1|AF113522 Zea mays cultivar TX-5855 acetoacetyl CoA thiolase mRNA, partial cds Length = 971 Score = 426 bits (215), Expect = e-116 Identities = 356/403 (88%) Strand = Plus / Minus Query: 268 ccgccgttgcagacaccagcaactccgatcttgccacccttctccctaagaacaccaaga 327 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 579 ccgccgttgcagacaccagcaacaccgatcttgccgcccttttccctaaggacaccaaga 520 Query: 328 agggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcct 387 ||||||||||||||||||||||| ||||||||||| || || |||| ||| ||||||||| Sbjct: 519 agggtgaccaaaatgcgagcaccgctgcacccaagaggatgccctagagacacagctcct 460 Query: 388 ccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaaca 447 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 459 ccatggacattaatcttttctgaaggaatcccaagaagcttttgatttgcaagtgcgaca 400 Query: 448 gccgaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattc 507 || ||||||||||||||||| ||| ||||||||||| | || ||||||| |||||||| Sbjct: 399 gcagaaaatgcttcattaatctcaaaaaaatcaacatgggatgactctaatccagcattt 340 Query: 508 gtgagagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggct 567 | | |||||| ||||| |||||||||||||| || ||||| ||||| |||||||| || Sbjct: 339 gatatagcctttggtatcgcaagtgctggggtggttgtaaaaagttccggagcttgagcc 280 Query: 568 gcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgagccttcttc 627 || || ||| |||| ||||||||||||||||||||| ||||| ||||||||||||| | Sbjct: 279 gcatctgcatatcctctgatccttgcaaggacttgcaggccaagctcttgagccttctgc 220 Query: 628 ccactcaccaatactaatgctgcagcgccatcacttatactag 670 ||||||||||| |||||||| || || |||||||||||||||| Sbjct: 219 ccactcaccaaaactaatgcagccgccccatcacttatactag 177
>gb|BT018966.1| Zea mays clone Contig360.F mRNA sequence Length = 1615 Score = 383 bits (193), Expect = e-103 Identities = 379/441 (85%) Strand = Plus / Minus Query: 230 cttacgcgagctctataacaagtgcagatgcaccgccaccgccgttgcagacaccagcaa 289 |||| |||||||| | |||||| || ||||| || || || ||||||||||||||||||| Sbjct: 1339 cttatgcgagctccagaacaagagctgatgctccccctcccccgttgcagacaccagcaa 1280 Query: 290 ctccgatcttgccacccttctccctaagaacaccaagaagggtgaccaaaatgcgagcac 349 |||| || ||||||| |||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 1279 ctcccattttgccactcttcgccctgagaacaccaataagggtaaccaaaatgcgagcac 1220 Query: 350 cactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttctg 409 | |||| ||| || || |||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 1219 ccctgcccccgagaggatgtcctaaagatacagctcccccatgaacattaatcttttctg 1160 Query: 410 aaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaattt 469 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 1159 aaggaattccaagaagcttttgatttgcaagtgcaacagccgaaaaggcttcattaatct 1100 Query: 470 cataaaaatcaacacgagaggactctaggccagcattcgtgagagccttcggtatggcaa 529 |||| ||||||||| | || ||||||| || ||||| | || |||||| ||||| |||| Sbjct: 1099 catagaaatcaacatgggatgactctaatcccgcatttgcgatagcctttggtattgcaa 1040 Query: 530 gtgctggggtagtggtaaatagttcaggagcttgggctgcgtcagcaaatcccttgatcc 589 ||||||| || || ||||| || || |||||||| ||||| |||||| | || ||||||| Sbjct: 1039 gtgctggagtggttgtaaaaagctccggagcttgagctgcatcagcataacctttgatcc 980 Query: 590 ttgcaaggacttgcaatccaagttcttgagccttcttcccactcaccaatactaatgctg 649 ||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||| | Sbjct: 979 ttgcaaggacttgaagggcaagctcttgagccttctgtccactcaccaaaactaatgcag 920 Query: 650 cagcgccatcacttatactag 670 |||| || ||||||||||||| Sbjct: 919 cagctccctcacttatactag 899
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 451 gaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtg 510 ||||| ||||||||||||||||| ||||||||||||| ||||| | ||||||||| | Sbjct: 3920354 gaaaaggcttcattaatttcatagtaatcaacacgagaagactccaagccagcattagca 3920295 Query: 511 agagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagc 560 |||||||| |||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 3920294 agagccttaggtatggcaagtgccgggctagtggtaaataattcaggagc 3920245 Score = 113 bits (57), Expect = 8e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 319 acaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagat 378 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 3920759 acaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaagac 3920700 Query: 379 acagctcctccatgtacatttatcttttc 407 |||||||||||||||||||| || ||||| Sbjct: 3920699 acagctcctccatgtacattaattttttc 3920671 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 560 cttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgag 619 |||| ||||| || |||||||| ||||| | ||||| ||||||| |||||||||||| | Sbjct: 3920039 cttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagttcttgtg 3919980 Query: 620 ccttcttcccactcaccaatactaatgctgcagcgccatcact 662 |||||| ||||||||||||||||||||| ||||| || ||||| Sbjct: 3919979 ccttctgcccactcaccaatactaatgcggcagcaccgtcact 3919937 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 312 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 3921080 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 3921021 Query: 313 ctaagaac 320 |||||||| Sbjct: 3921020 ctaagaac 3921013 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 407 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 450 |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3920499 ctgaaggaattccaagaagcttttgatttgcaagtgcaacagcc 3920456
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 451 gaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtg 510 ||||| ||||||||||||||||| ||||||||||||| ||||| | ||||||||| | Sbjct: 51866 gaaaaggcttcattaatttcatagtaatcaacacgagaagactccaagccagcattagca 51807 Query: 511 agagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagc 560 |||||||| |||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 51806 agagccttaggtatggcaagtgccgggctagtggtaaataattcaggagc 51757 Score = 113 bits (57), Expect = 8e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 319 acaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagat 378 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 52271 acaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaagac 52212 Query: 379 acagctcctccatgtacatttatcttttc 407 |||||||||||||||||||| || ||||| Sbjct: 52211 acagctcctccatgtacattaattttttc 52183 Score = 93.7 bits (47), Expect = 7e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 560 cttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgag 619 |||| ||||| || |||||||| ||||| | ||||| ||||||| |||||||||||| | Sbjct: 51551 cttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagttcttgtg 51492 Query: 620 ccttcttcccactcaccaatactaatgctgcagcgccatcact 662 |||||| ||||||||||||||||||||| ||||| || ||||| Sbjct: 51491 ccttctgcccactcaccaatactaatgcggcagcaccgtcact 51449 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 312 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 52592 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 52533 Query: 313 ctaagaac 320 |||||||| Sbjct: 52532 ctaagaac 52525 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 407 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 450 |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 52011 ctgaaggaattccaagaagcttttgatttgcaagtgcaacagcc 51968
>ref|NM_180823.1| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.1 mRNA, complete cds Length = 1731 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 408 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1148 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1089 Query: 409 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 468 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1088 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1029 Query: 469 tcataaaaatcaac 482 ||||| ||||||| Sbjct: 1028 tcatagtaatcaac 1015
>ref|NM_124198.2| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.2 mRNA, complete cds Length = 1993 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 408 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1410 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1351 Query: 409 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 468 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1350 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1291 Query: 469 tcataaaaatcaac 482 ||||| ||||||| Sbjct: 1290 tcatagtaatcaac 1277
>gb|AY091271.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1228 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 408 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1079 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1020 Query: 409 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 468 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1019 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 960 Query: 469 tcataaaaatcaac 482 ||||| ||||||| Sbjct: 959 tcatagtaatcaac 946
>gb|AY059736.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1531 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 408 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1150 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1091 Query: 409 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 468 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1090 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1031 Query: 469 tcataaaaatcaac 482 ||||| ||||||| Sbjct: 1030 tcatagtaatcaac 1017
>gb|AF364059.1| Arabidopsis thaliana acetoacetyl-CoA thiolase (AAT1) mRNA, complete cds Length = 1736 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 408 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1281 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1222 Query: 409 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 468 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1221 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1162 Query: 469 tcataaaaatcaac 482 ||||| ||||||| Sbjct: 1161 tcatagtaatcaac 1148
>gb|AF429383.1|AF429383 Hevea brasiliensis acetyl Co-A acetyltransferase mRNA, complete cds Length = 1669 Score = 85.7 bits (43), Expect = 2e-13 Identities = 124/151 (82%) Strand = Plus / Minus Query: 331 gtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctcca 390 |||||||| || ||||| |||||||| || | ||| ||||| |||||||||||||||||| Sbjct: 1263 gtgaccaagatacgagctccactgcatcctaatggatgtcccaaagatacagctcctcca 1204 Query: 391 tgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 450 || ||||||| ||||| | | || || || | ||||||||| ||||| || ||| | Sbjct: 1203 tgaacatttaatttttcaggattaagaccaagtatcttttgattggcaagggccacaaca 1144 Query: 451 gaaaatgcttcattaatttcataaaaatcaa 481 |||||||||||||| ||||||||| |||||| Sbjct: 1143 gaaaatgcttcatttatttcataataatcaa 1113
>gb|AY748246.1| Nicotiana tabacum peroxisomal acetoacetyl-coenzyme A thiolase (AACT2) mRNA, complete cds Length = 1522 Score = 83.8 bits (42), Expect = 7e-13 Identities = 168/210 (80%) Strand = Plus / Minus Query: 457 gcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtgagagcc 516 |||||||| ||||||||| | |||| |||| ||||| ||||||| |||| | | || Sbjct: 1106 gcttcatttatttcataatagtcaatttgagatgactcaaggccagaattcttaattgct 1047 Query: 517 ttcggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcgtcagca 576 || ||||| ||||| ||||| | || ||||||| ||||| || || ||||| || ||| Sbjct: 1046 tttggtattgcaagagctggagctgttgtaaataactcaggtgcctgagctgcatctgca 987 Query: 577 aatcccttgatccttgcaaggacttgcaatccaagttcttgagccttcttcccactcacc 636 ||||| ||||||| ||| ||||||||||||||||| | ||||| | ||||||||| Sbjct: 986 aatcctctgatcctaccaattacttgcaatccaagttcaagtgccttttgtccactcacc 927 Query: 637 aatactaatgctgcagcgccatcacttata 666 | ||||||||||||||||||||||||||| Sbjct: 926 agaactaatgctgcagcgccatcacttata 897
>gb|AY748245.1| Nicotiana tabacum cytosolic acetoacetyl-coenzyme A thiolase (AACT1) mRNA, complete cds Length = 1455 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Minus Query: 322 ccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagataca 381 |||||||| || ||||| || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 1142 ccaagaagtgtaaccaatatacgagctccactgcatccaagagggtgccccaaagataca 1083 Query: 382 gctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagt 441 ||||| ||||||||||| | ||||||| | || || || ||||||||||||||||| Sbjct: 1082 gctccaccatgtacattaactttttctggattaagaccaagcagcttttgatttgcaaga 1023 Query: 442 gcaacagccgaaaatgcttcattaatttcata 473 | || | | ||| ||||||||||||||||| Sbjct: 1022 gataccacagcaaaagcttcattaatttcata 991
>emb|X78116.1|RSLAACT R.sativus L. (Saxa knacker) AACT mRNA Length = 1462 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 408 |||||||| || || || |||||||| || || |||||||||| |||||| | ||| || Sbjct: 1145 ccactgcagcctagaggatgtcctaaggagacggctcctccatttacattcaccttctcc 1086 Query: 409 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 468 | | |||||| || |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1085 ggactaatcccaagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1026 Query: 469 tcataaaaatcaac 482 ||||| ||||||| Sbjct: 1025 tcatagtaatcaac 1012
>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH077A05, complete sequence Length = 113253 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 331 gtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctcca 390 ||||| |||||||||||||||||||| || ||||| ||||| || | ||||| |||||| Sbjct: 23105 gtgactaaaatgcgagcaccactgcatcccagtggatgtcccaatgcaacagcccctcca 23164 Query: 391 tgtacatt 398 ||| |||| Sbjct: 23165 tgtgcatt 23172
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21 Length = 59372 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 414 aatcccgagaagcttttgatttgcaagtgc 443 ||||||||| |||||||||||||||||||| Sbjct: 44470 aatcccgagtagcttttgatttgcaagtgc 44499 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 349 ccactgcacccaagtgggtgtcctaaagatacagctcctccat 391 |||||||| || || ||||||||||| || ||||||||||||| Sbjct: 44303 ccactgcagcctagagggtgtcctaaggagacagctcctccat 44345
>dbj|D13470.1|YSACTPACTA Candida tropicalis CTPACTA gene for acetoacetyl-CoA thiolase A, complete cds Length = 1702 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagcaactccga 295 ||||| ||||| |||||||| || |||||||||||||| |||| Sbjct: 1437 gcagacgcaccaccaccgccattacagacaccagcaacaccga 1395
>gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosome 15, complete sequence Length = 205639 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 caccagaaaataaaagaacaat 55 |||||||||||||||||||||| Sbjct: 161185 caccagaaaataaaagaacaat 161164
>gb|AC127562.3| Mus musculus BAC clone RP24-279I22 from chromosome 15, complete sequence Length = 173351 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 caccagaaaataaaagaacaat 55 |||||||||||||||||||||| Sbjct: 22434 caccagaaaataaaagaacaat 22413
>gb|AC141108.3| Medicago truncatula clone mth2-22g6, complete sequence Length = 119745 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 429 ttgatttgcaagtgcaacagcc 450 |||||||||||||||||||||| Sbjct: 54124 ttgatttgcaagtgcaacagcc 54145
>gb|AY105770.1| Zea mays PCO104693 mRNA sequence Length = 1879 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 649 gcagcgccatcacttatactag 670 |||||||||||||||||||||| Sbjct: 1047 gcagcgccatcacttatactag 1026
>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135, complete sequence Length = 96988 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 gaaaataaaagaacaataacct 60 |||||||||||||||||||||| Sbjct: 5167 gaaaataaaagaacaataacct 5188
>gb|AC169705.1| Rhesus Macaque BAC CH250-174C17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 181644 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 aagcttttgatttgcaagtgc 443 ||||||||||||||||||||| Sbjct: 170248 aagcttttgatttgcaagtgc 170268
>ref|XM_716682.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_1704), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 453 aaatgcttcattaatttcataaaaatcaa 481 |||||||||||| |||||||||| ||||| Sbjct: 1017 aaatgcttcattgatttcataaatatcaa 989
>ref|XM_716561.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_9271), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 453 aaatgcttcattaatttcataaaaatcaa 481 |||||||||||| |||||||||| ||||| Sbjct: 1017 aaatgcttcattgatttcataaatatcaa 989
>ref|XM_724739.1| Plasmodium yoelii yoelii str. 17XNL acetyl-coa acetyltransferase (PY01991) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 ttcattaatttcataaaaatcaaca 483 |||||||||||||||| |||||||| Sbjct: 966 ttcattaatttcataataatcaaca 942
>ref|XM_736099.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000254.00.0) partial mRNA Length = 267 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 ttcattaatttcataaaaatcaaca 483 |||||||||||||||| |||||||| Sbjct: 39 ttcattaatttcataataatcaaca 15
>ref|XM_674793.1| Plasmodium berghei strain ANKA acetyl-CoA acetyltransferase, (PB001025.03.0) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 ttcattaatttcataaaaatcaaca 483 |||||||||||||||| |||||||| Sbjct: 966 ttcattaatttcataataatcaaca 942
>emb|AJ851688.1| Gallus gallus mRNA for hypothetical protein, clone 17n23 Length = 6469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 624 cttcccactcaccaatactaa 644 ||||||||||||||||||||| Sbjct: 2472 cttcccactcaccaatactaa 2492
>emb|CR388091.9| Zebrafish DNA sequence from clone CH211-114H16 in linkage group 15, complete sequence Length = 186423 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 aaaataaaagaacaataacct 60 ||||||||||||||||||||| Sbjct: 4513 aaaataaaagaacaataacct 4493
>emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC RPCI-31-484K6 strain Brown Norway (BN/ssNHsd), RT1n haplotype Length = 94535 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gacacacaagcacctgaaact 176 ||||||||||||||||||||| Sbjct: 9519 gacacacaagcacctgaaact 9499
>emb|AL110796.1|CNS018TX Botrytis cinerea strain T4 cDNA library Length = 395 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 247 acaagtgcagatgcaccgccaccgccgttgcagacaccagcaactccgatctt 299 ||||| |||||||| || |||||||||||||| | ||| ||||| || ||||| Sbjct: 298 acaagagcagatgctccaccaccgccgttgcaaataccggcaacaccaatctt 246
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 tttatcttttctgaaggaatc 417 ||||||||||||||||||||| Sbjct: 789869 tttatcttttctgaaggaatc 789889
>emb|AJ430527.1|PWO430527 Passionfruit woodiness virus partial genomic RNA for polyprotein, genomic RNA Length = 1260 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 cattaatttcataaaaatcaa 481 ||||||||||||||||||||| Sbjct: 823 cattaatttcataaaaatcaa 803
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 acatggagacacacaagcac 168 |||||||||||||||||||| Sbjct: 45272 acatggagacacacaagcac 45253
>ref|XM_630905.1| Dictyostelium discoideum hypothetical protein (DDB0188659), partial mRNA Length = 1446 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 agctacaccagaaaataaaa 48 |||||||||||||||||||| Sbjct: 114 agctacaccagaaaataaaa 133
>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence Length = 193624 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 attaatttcataaaaatcaa 481 |||||||||||||||||||| Sbjct: 151141 attaatttcataaaaatcaa 151160
>ref|XM_454425.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10505g predicted mRNA Length = 4701 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tacatttatcttttctgaag 412 |||||||||||||||||||| Sbjct: 3630 tacatttatcttttctgaag 3611
>gb|AC113038.14| Mus musculus chromosome 17, clone RP23-228K17, complete sequence Length = 226769 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 attaatttcataaaaatcaa 481 |||||||||||||||||||| Sbjct: 137590 attaatttcataaaaatcaa 137571
>gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154492 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 agaaaataaaagaacaataa 57 |||||||||||||||||||| Sbjct: 143461 agaaaataaaagaacaataa 143442
>gb|BC054299.1| Xenopus laevis acetyl-Coenzyme A acyltransferase 1, mRNA (cDNA clone MGC:64556 IMAGE:6879896), complete cds Length = 1718 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 aatgcttcattaatttcata 473 |||||||||||||||||||| Sbjct: 1050 aatgcttcattaatttcata 1031
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 acatggagacacacaagcac 168 |||||||||||||||||||| Sbjct: 15019 acatggagacacacaagcac 15038
>emb|AL355173.25| Human DNA sequence from clone RP11-335P18 on chromosome 13 Contains the 3' end of the PCDH9 gene for protocadherin 9 and a novel gene, complete sequence Length = 165699 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 acatggagacacacaagcac 168 |||||||||||||||||||| Sbjct: 55716 acatggagacacacaagcac 55697
>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome Length = 300923 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gagaagcttttgatttgcaa 439 |||||||||||||||||||| Sbjct: 60688 gagaagcttttgatttgcaa 60707
>emb|AL138816.12| Human DNA sequence from clone RP11-235O20 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to heparan sulfate 6-sulfotransferase, complete sequence Length = 142420 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 acatggagacacacaagcac 168 |||||||||||||||||||| Sbjct: 105339 acatggagacacacaagcac 105320
>emb|AL049588.11|HSJ169P22 Human DNA sequence from clone RP1-169P22 on chromosome Xq27.1-28 Contains two pseudogenes similar to part of ribonucleotide reductase M2 polypeptide (RRM2), complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 agaaaataaaagaacaataa 57 |||||||||||||||||||| Sbjct: 107603 agaaaataaaagaacaataa 107622
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tacatttatcttttctgaag 412 |||||||||||||||||||| Sbjct: 925772 tacatttatcttttctgaag 925791
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 gtgaccaaaatgcgagcaccactg 354 ||||||||||||||||| |||||| Sbjct: 625719 gtgaccaaaatgcgagccccactg 625696
>gb|AC087463.5| Homo sapiens chromosome 15, clone RP11-682C24, complete sequence Length = 196918 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 accagaaaataaaagaacaataac 58 |||||||||||||| ||||||||| Sbjct: 104082 accagaaaataaaacaacaataac 104059
>gb|AC087474.9| Homo sapiens chromosome 15, clone RP11-350A1, complete sequence Length = 185221 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 accagaaaataaaagaacaataac 58 |||||||||||||| ||||||||| Sbjct: 79153 accagaaaataaaacaacaataac 79130
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gagaagcttttgatttgcaa 439 |||||||||||||||||||| Sbjct: 777999 gagaagcttttgatttgcaa 777980
>emb|BX470260.10| Zebrafish DNA sequence from clone CH211-125C23 in linkage group 14, complete sequence Length = 66554 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acacaagcacctgaaactgc 178 |||||||||||||||||||| Sbjct: 34117 acacaagcacctgaaactgc 34098
>gb|AC155934.2| Mus musculus BAC clone RP23-58N8 from chromosome 9, complete sequence Length = 198059 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cagaggcaggctccatcttt 204 |||||||||||||||||||| Sbjct: 26453 cagaggcaggctccatcttt 26472
>gb|AC158516.2| Mus musculus BAC clone RP24-511A23 from chromosome 9, complete sequence Length = 167046 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cagaggcaggctccatcttt 204 |||||||||||||||||||| Sbjct: 163143 cagaggcaggctccatcttt 163162
>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete sequence Length = 272840 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 acaccagaaaataaaagaacaataacct 60 |||||| ||||||||| ||||||||||| Sbjct: 12775 acaccaaaaaataaaaaaacaataacct 12802
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acaccagaaaataaaagaac 52 |||||||||||||||||||| Sbjct: 6950852 acaccagaaaataaaagaac 6950871
>gb|AC139362.2| Homo sapiens chromosome 15, clone RP11-580I1, complete sequence Length = 195033 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 accagaaaataaaagaacaataac 58 |||||||||||||| ||||||||| Sbjct: 107726 accagaaaataaaacaacaataac 107703
>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14 map q28, complete sequence Length = 185708 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 aagttaaccaattacttaatctgg 116 |||||||||||||| ||||||||| Sbjct: 40428 aagttaaccaattaattaatctgg 40405
>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence Length = 148527 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 aagttaaccaattacttaatctgg 116 |||||||||||||| ||||||||| Sbjct: 55049 aagttaaccaattaattaatctgg 55026
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gagaagcttttgatttgcaa 439 |||||||||||||||||||| Sbjct: 63192 gagaagcttttgatttgcaa 63211
>gb|AC134903.4| Mus musculus BAC clone RP23-329A21 from chromosome 5, complete sequence Length = 198368 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aggagttctaagttaaccaa 103 |||||||||||||||||||| Sbjct: 6872 aggagttctaagttaaccaa 6853
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gagaagcttttgatttgcaa 439 |||||||||||||||||||| Sbjct: 62873 gagaagcttttgatttgcaa 62892
>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete sequence Length = 205765 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gcaagtgctggggtagtggt 545 |||||||||||||||||||| Sbjct: 87134 gcaagtgctggggtagtggt 87115
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acaccagaaaataaaagaac 52 |||||||||||||||||||| Sbjct: 74667 acaccagaaaataaaagaac 74686
>gb|AC115853.8| Mus musculus chromosome 5, clone RP24-273B9, complete sequence Length = 188562 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aggagttctaagttaaccaa 103 |||||||||||||||||||| Sbjct: 158456 aggagttctaagttaaccaa 158437
>emb|BX004850.11| Zebrafish DNA sequence from clone CH211-51M24 in linkage group 19, complete sequence Length = 121375 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cagaaaataaaagaacaata 56 |||||||||||||||||||| Sbjct: 90260 cagaaaataaaagaacaata 90279
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 acaccagaaaataaaagaac 52 |||||||||||||||||||| Sbjct: 107107 acaccagaaaataaaagaac 107126
>gb|AC174384.2| Gallus gallus BAC clone CH261-128H23 from chromosome ul, complete sequence Length = 206900 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggtgtttgttacaaggtcag 224 |||||||||||||||||||| Sbjct: 99127 ggtgtttgttacaaggtcag 99146
>dbj|D13471.1|YSACTPACTB Candida tropicalis CTPACTB gene for acetoacetyl-CoA thiolase A, complete cds Length = 1707 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 253 gcagatgcaccgccaccgccgttgcagacaccagca 288 ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1443 gcagaggcaccaccaccaccgttacagacaccagca 1408 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,302,863 Number of Sequences: 3902068 Number of extensions: 7302863 Number of successful extensions: 144085 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 143769 Number of HSP's gapped (non-prelim): 313 length of query: 670 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 647 effective length of database: 17,143,297,704 effective search space: 11091713614488 effective search space used: 11091713614488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)