>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  206 bits (524), Expect(2) = 2e-72
 Identities = 101/101 (100%), Positives = 101/101 (100%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY
Sbjct: 327 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 386

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 387 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 2e-72
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 256 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 143
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  165 bits (418), Expect(2) = 1e-54
 Identities = 80/101 (79%), Positives = 91/101 (90%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EY
Sbjct: 337 FPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEY 396

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           G+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 397 GNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 1e-54
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 256 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 143
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  166 bits (420), Expect(2) = 2e-54
 Identities = 78/101 (77%), Positives = 90/101 (89%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL Y
Sbjct: 337 FPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGY 396

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           G MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 397 GGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 2e-54
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -1

Query: 259 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 143
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  167 bits (423), Expect(2) = 4e-54
 Identities = 77/101 (76%), Positives = 92/101 (91%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EY
Sbjct: 335 FPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEY 394

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           G+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 395 GNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 4e-54
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 256 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 149
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  182 bits (461), Expect = 9e-46
 Identities = 85/101 (84%), Positives = 94/101 (93%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EY
Sbjct: 324 FPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEY 383

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           GHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 384 GHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  181 bits (459), Expect = 1e-45
 Identities = 85/101 (84%), Positives = 95/101 (94%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EY
Sbjct: 327 FPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEY 386

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           G+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 387 GYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  175 bits (444), Expect = 8e-44
 Identities = 81/101 (80%), Positives = 94/101 (93%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEY
Sbjct: 337 FPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEY 396

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 304
           G+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 397 GNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  173 bits (438), Expect = 4e-43
 Identities = 79/100 (79%), Positives = 94/100 (94%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEY
Sbjct: 333 FPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEY 392

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 307
           GHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 393 GHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  169 bits (427), Expect = 7e-42
 Identities = 78/99 (78%), Positives = 92/99 (92%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+Y
Sbjct: 337 FPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQY 396

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 310
           G+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 397 GNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  167 bits (424), Expect = 2e-41
 Identities = 80/100 (80%), Positives = 89/100 (89%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEY
Sbjct: 341 FPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEY 400

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 307
           G+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 401 GNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  167 bits (424), Expect = 2e-41
 Identities = 81/99 (81%), Positives = 90/99 (90%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEY
Sbjct: 341 FPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEY 400

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 310
           G+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 401 GNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  167 bits (423), Expect = 2e-41
 Identities = 80/97 (82%), Positives = 90/97 (92%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEY
Sbjct: 336 FPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEY 395

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 316
           G+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 396 GNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  161 bits (407), Expect = 2e-39
 Identities = 72/100 (72%), Positives = 93/100 (93%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+Y
Sbjct: 339 FPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQY 398

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 307
           G+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 399 GNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  158 bits (399), Expect = 1e-38
 Identities = 71/99 (71%), Positives = 91/99 (91%)
 Frame = -2

Query: 603 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYG 424
           PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y 
Sbjct: 342 PGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYA 401

Query: 423 HMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 307
            MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 402 SMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  125 bits (315), Expect = 7e-29
 Identities = 58/76 (76%), Positives = 67/76 (88%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEY
Sbjct: 334 FPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEY 393

Query: 426 GHMLVQEQDNVKRVQL 379
           G+MLV EQ+NVKRV+L
Sbjct: 394 GNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  104 bits (260), Expect = 2e-22
 Identities = 52/86 (60%), Positives = 65/86 (75%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FPGQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++Y
Sbjct: 310 FPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKY 368

Query: 426 GHMLVQEQDNVKRVQLADTYMSQAAL 349
           G  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 369 GKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 36/80 (45%), Positives = 54/80 (67%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FP QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E 
Sbjct: 210 FPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIES 269

Query: 426 GHMLVQEQDNVKRVQLADTY 367
            + +V EQ  ++  QL D Y
Sbjct: 270 ANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 35/80 (43%), Positives = 52/80 (65%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEY 427
           FP QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E 
Sbjct: 210 FPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIES 269

Query: 426 GHMLVQEQDNVKRVQLADTY 367
           G++++ EQ  V   QL D Y
Sbjct: 270 GNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 24/56 (42%), Positives = 26/56 (46%)
 Frame = -2

Query: 606 FPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 439
           FPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 5   FPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -2

Query: 474 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 319
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 318 GSFYG*KILHTHPPSLAA 265
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -2

Query: 474 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 319
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 318 GSFYG*KILHTHPPSLAA 265
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 371 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 475
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 537 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 430
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = -2

Query: 474 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 319
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 318 GSFYG*KILHTHPPSLAA 265
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,935,115
Number of Sequences: 219361
Number of extensions: 1763014
Number of successful extensions: 5205
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5203
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)