ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62l14 |
|---|---|
| Clone Library Name | barley_pub |
>AAA1_RAT (P63116) Asc-type amino acid transporter 1 (Asc-1) (D-serine| transporter) Length = 530 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +1 Query: 148 QPKEPRCAPPMAAGKLAGRSRLCYLSGMESGTENLSEPSYLLXTGVVLLDCRLVATITF 324 QP P C PP A ++ + L L+ + S + + ++ TG LL L+ T+ F Sbjct: 154 QPVFPNCIPPATASRVLSMACLMLLTWVNSSSVRWATRIQVIFTGGKLLALSLIITVGF 212
>AAA1_MOUSE (P63115) Asc-type amino acid transporter 1 (Asc-1) (D-serine| transporter) Length = 530 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +1 Query: 148 QPKEPRCAPPMAAGKLAGRSRLCYLSGMESGTENLSEPSYLLXTGVVLLDCRLVATITF 324 QP P C PP A ++ + L L+ + S + + ++ TG LL L+ T+ F Sbjct: 154 QPVFPNCIPPATASRVLSMACLMLLTWVNSSSVRWATRIQVIFTGGKLLALSLIITVGF 212
>YPFP_BACSU (P54166) Putative glycosyl transferase ypfP (EC 2.-.-.-)| Length = 382 Score = 30.4 bits (67), Expect = 1.0 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%) Frame = -1 Query: 404 LADSYLHPVFKSDHVDKFYVADDPGAEKVI-VATKRQSRRTT--PVXSKYDGSDRFSVPD 234 + D LH ++ ++VDK+YVA D EK++ + T + + T P+ +++ S+P Sbjct: 134 MTDFCLHKIWVHENVDKYYVATDYVKEKLLEIGTHPSNVKITGIPIRPQFEE----SMPV 189 Query: 233 SIPER*HNLLRPASLPAAMGGAH 165 + +NL + M GAH Sbjct: 190 GPIYKKYNLSPNKKVLLIMAGAH 212
>DXS_WIGBR (Q8D357) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 626 Score = 29.3 bits (64), Expect = 2.3 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 9/72 (12%) Frame = +3 Query: 177 HGGWQACRPEQVVLPFGYGV------RHREPVGAVVLARHGRGPPXLPLGRHDHLLRAGV 338 H G+Q P V P GYG+ ++ P+G ++ R G+ L G L++A + Sbjct: 466 HTGYQQLGPSAVRYPRGYGIGVKFSNLYKIPLGKGIVLRKGKKIAILNFG--VLLIQANI 523 Query: 339 VG---DVKLVDM 365 V D LVDM Sbjct: 524 VAKELDATLVDM 535
>G6PI_BACTN (Q8A5W2) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 445 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -1 Query: 329 AEKVIVATKRQSRRTTPVXSKYDGSDRFSVPDSIPER*HNLLRPASLPAAMGGAHLGSL 153 A+KVIVA + V + +G F +PD++ R L LP A+ G + L Sbjct: 167 AKKVIVAVTDAKKGAARVTADKEGYKTFIIPDNVGGRFSVLTPVGLLPIAVAGFDIDKL 225
>G6PI_BACFR (Q64PM7) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 445 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -1 Query: 329 AEKVIVATKRQSRRTTPVXSKYDGSDRFSVPDSIPER*HNLLRPASLPAAMGGAHLGSL 153 A+KVIVA + V + +G F +PD++ R L LP A+ G + L Sbjct: 167 AKKVIVAVTDAKKGAARVTADKEGYKSFIIPDNVGGRFSVLTPVGLLPIAVAGFDIEQL 225
>G6PI_BACFN (Q5L9E3) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 445 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -1 Query: 329 AEKVIVATKRQSRRTTPVXSKYDGSDRFSVPDSIPER*HNLLRPASLPAAMGGAHLGSL 153 A+KVIVA + V + +G F +PD++ R L LP A+ G + L Sbjct: 167 AKKVIVAVTDAKKGAARVTADKEGYKSFIIPDNVGGRFSVLTPVGLLPIAVAGFDIEQL 225
>VACHT_DROME (O17444) Vesicular acetylcholine transporter (VAChT)| Length = 578 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +1 Query: 178 MAAGKLAGRSRLCYLSGMESGTENLSEPSYLLXTGVVLLDCRLVATITF 324 MAAG LA C++ SG + L P ++ G+ L+D L+ T+ + Sbjct: 333 MAAGGLALEGFSCFIIPFCSGYKMLMLPICVICFGIALIDTALLPTLGY 381
>CXA1_XENLA (P16863) Gap junction alpha-1 protein (Connexin-43) (Cx43)| Length = 378 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +1 Query: 184 AGKLAGRSRLCYLSGMESGTENLSEPSYLLXTG 282 +GK G + Y +G S T +S P Y L TG Sbjct: 255 SGKECGSPKYAYFNGCSSPTAPMSPPGYKLVTG 287
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = -2 Query: 259 APTGSRCRTPYPKGSTTCSGRQACQP 182 +P GSRC P P+ + T + +C P Sbjct: 112 SPCGSRCAPPAPRATATSAVTASCSP 137
>FUCI_SHIFL (P69923) L-fucose isomerase (EC 5.3.1.25) (6-deoxy-L-galactose| isomerase) (FucIase) Length = 591 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Frame = -1 Query: 353 FYVADDPGAEKVIVATKRQSRRTTPVXSKY----DGSDRFSVPDSIPER*HNLLRPASLP 186 F + PGA + A S++ P S Y +D S+P + E+ R Sbjct: 110 FNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAV 169 Query: 185 AAMGGAHLGSLGCXXXXXXXXXXXXXGIEFWLMM---MMDVTRL 63 A+M G SLG E WL M +D+T L Sbjct: 170 ASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTEL 213
>FUCI_ECOLI (P69922) L-fucose isomerase (EC 5.3.1.25) (6-deoxy-L-galactose| isomerase) (FucIase) Length = 591 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Frame = -1 Query: 353 FYVADDPGAEKVIVATKRQSRRTTPVXSKY----DGSDRFSVPDSIPER*HNLLRPASLP 186 F + PGA + A S++ P S Y +D S+P + E+ R Sbjct: 110 FNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAV 169 Query: 185 AAMGGAHLGSLGCXXXXXXXXXXXXXGIEFWLMM---MMDVTRL 63 A+M G SLG E WL M +D+T L Sbjct: 170 ASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTEL 213
>FUCI_ECOL6 (Q8FEE7) L-fucose isomerase (EC 5.3.1.25) (6-deoxy-L-galactose| isomerase) (FucIase) Length = 591 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Frame = -1 Query: 353 FYVADDPGAEKVIVATKRQSRRTTPVXSKY----DGSDRFSVPDSIPER*HNLLRPASLP 186 F + PGA + A S++ P S Y +D S+P + E+ R Sbjct: 110 FNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAV 169 Query: 185 AAMGGAHLGSLGCXXXXXXXXXXXXXGIEFWLMM---MMDVTRL 63 A+M G SLG E WL M +D+T L Sbjct: 170 ASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTEL 213
>FUCI_ECO57 (Q8X6R5) L-fucose isomerase (EC 5.3.1.25) (6-deoxy-L-galactose| isomerase) (FucIase) Length = 591 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Frame = -1 Query: 353 FYVADDPGAEKVIVATKRQSRRTTPVXSKY----DGSDRFSVPDSIPER*HNLLRPASLP 186 F + PGA + A S++ P S Y +D S+P + E+ R Sbjct: 110 FNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAV 169 Query: 185 AAMGGAHLGSLGCXXXXXXXXXXXXXGIEFWLMM---MMDVTRL 63 A+M G SLG E WL M +D+T L Sbjct: 170 ASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTEL 213
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Frame = +1 Query: 175 PMAAGKLAGRSRLCYLSGMES------GTENLSEPSYLLXTGVVLLDCRLVATITFSAPG 336 PM G L RLCYLS M S L+ P L G ++ +A + ++ P Sbjct: 386 PMLGGGLKLGQRLCYLSAMTSFFFAIPRVIFLASPLAFLFFGQNIIAASPLAVLAYAIPH 445 Query: 337 SSAT*NLSTWSLLNTGCRY 393 +++T + +N G RY Sbjct: 446 MFH--SIATAAKVNKGWRY 462
>WOX8_ARATH (Q6X7J5) WUSCHEL-related homeobox 8| Length = 325 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/50 (24%), Positives = 21/50 (42%) Frame = +3 Query: 63 QPCDIHHHHQPEFNSPXXXXXXXXXXXXXXXRTKMRSSHGGWQACRPEQV 212 +PC+ +HHHQ E ++P ++ W +PEQ+ Sbjct: 15 KPCNNNHHHQHEIDTPSYMHYSNCNLSSSFSSDRIPDPKPRWNP-KPEQI 63
>THIG_GEOSL (Q74FL9) Thiazole biosynthesis protein thiG| Length = 260 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 96 LVDDDDGCHTAGDVGRTCKLATHTMFLPLV 7 L+ + GC+TA D RTC+LA LV Sbjct: 72 LLPNTAGCYTADDAVRTCRLAREAGMSDLV 101
>THAS_RAT (P49430) Thromboxane-A synthase (EC 5.3.99.5) (TXA synthase) (TXS)| Length = 533 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 169 APPMAAGKLAGRSRLCYLSGMESGTENLSEPSYLLXT 279 A P+ ++AG++ L ++G E T LS +YLL T Sbjct: 323 AKPLTVDEIAGQAFLFLIAGHEITTNTLSFITYLLAT 359
>KLKB1_HUMAN (P03952) Plasma kallikrein precursor (EC 3.4.21.34) (Plasma| prekallikrein) (Kininogenin) (Fletcher factor) [Contains: Plasma kallikrein heavy chain; Plasma kallikrein light chain] Length = 638 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +1 Query: 190 KLAGRSRLCYLSGMESGTENLSEPSYLLXTGVVLLDCR 303 K+ + +C L ESGT + S P +G LL C+ Sbjct: 248 KIESQRNVCLLKTSESGTPSSSTPQENTISGYSLLTCK 285
>E2AK2_SCHPO (Q9UTE5) Eukaryotic translation initiation factor 2-alpha kinase 2| (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Heme-regulated inhibitor 2) Length = 639 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = -1 Query: 383 PVFKSDHVDKFYVADDPGAEKVIVATKRQSRRTTPVXSKYD 261 P S D A+DPG E +I +++ S +T S ++ Sbjct: 276 PTESSALTDDILFAEDPGTESIISTSRKSSYSSTTESSNFE 316
>INP4A_MOUSE (Q9EPW0) Type I inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type I) Length = 939 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 250 GSRCRTPYPKGSTTCSGRQACQPPWEE 170 G C +P S+TCS ++ C PP EE Sbjct: 557 GEGCEDAFPC-SSTCSSKKDCSPPPEE 582 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,570,474 Number of Sequences: 219361 Number of extensions: 902047 Number of successful extensions: 2783 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2782 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
