>PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score =  103 bits (257), Expect = 1e-22
 Identities = 51/73 (69%), Positives = 55/73 (75%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           ++GRK   KGVYQFV KYGANVDGYSPIY  EEW+ +GD YAGGTTGLLIWAVT      
Sbjct: 67  SSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLA 126

Query: 164 XXXXLVYNTSALA 126
               LVYNTSALA
Sbjct: 127 GGALLVYNTSALA 139

>PSBR_SOLTU (P06183) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (Light-inducible tissue-specific ST-LS1 protein)
          Length = 138

 Score =  100 bits (250), Expect = 7e-22
 Identities = 50/73 (68%), Positives = 53/73 (72%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           A+GRK   KGVYQ+V KYGANVDGYSPIY  +EWS SGD Y GGTTGL IWAVT      
Sbjct: 65  ASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILA 124

Query: 164 XXXXLVYNTSALA 126
               LVYNTSALA
Sbjct: 125 GGALLVYNTSALA 137

>PSBR_LYCES (Q40163) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score =  100 bits (250), Expect = 7e-22
 Identities = 50/73 (68%), Positives = 53/73 (72%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           A+GRK   KGVYQ+V KYGANVDGYSPIY  +EWS SGD Y GGTTGL IWAVT      
Sbjct: 65  ASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILA 124

Query: 164 XXXXLVYNTSALA 126
               LVYNTSALA
Sbjct: 125 GGALLVYNTSALA 137

>PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score =  100 bits (248), Expect = 1e-21
 Identities = 49/73 (67%), Positives = 52/73 (71%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           A+GR    KGVYQF  KYGANVDGYSPIYTPEEWS SGD Y GG TGL +WAVT      
Sbjct: 65  ASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILL 124

Query: 164 XXXXLVYNTSALA 126
               LVY+TSALA
Sbjct: 125 GGALLVYSTSALA 137

>PSBR_TOBAC (Q40519) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (PII10)
          Length = 136

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 49/73 (67%), Positives = 53/73 (72%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           A+GRK   KGVYQFV KYGANVDGYSPIY  ++WS SGD Y GGTTGL IWAVT      
Sbjct: 63  ASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILA 122

Query: 164 XXXXLVYNTSALA 126
               LV+NTSALA
Sbjct: 123 GGALLVFNTSALA 135

>PSBR_BRACM (P49108) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 141

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 48/73 (65%), Positives = 51/73 (69%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           A+GRK    GVY+FV KYGANVDGYSPIY  +EWS SGD Y GG TGL IWAVT      
Sbjct: 68  ASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILA 127

Query: 164 XXXXLVYNTSALA 126
               LVYNTSALA
Sbjct: 128 GGALLVYNTSALA 140

>PSBR_ARATH (P27202) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 47/73 (64%), Positives = 50/73 (68%)
 Frame = -3

Query: 344 ANGRKVGXKGVYQFVXKYGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWAVTXXXXXX 165
           A+GRK    GVY++V KYGANVDGYSPIY   EWS SGD Y GG TGL IWAVT      
Sbjct: 67  ASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILA 126

Query: 164 XXXXLVYNTSALA 126
               LVYNTSALA
Sbjct: 127 GGALLVYNTSALA 139

>DYH5_HUMAN (Q8TE73) Ciliary dynein heavy chain 5 (Axonemal beta dynein heavy|
           chain 5) (HL1)
          Length = 4624

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -3

Query: 329 VGXKGVYQFVXK-YGANVDGYSPIYTPEEWSESGDRYAGGTTGLLIWA 189
           +G    YQ + + YGA++D  S +YT +++     R      G ++WA
Sbjct: 583 LGIDDKYQLILENYGADIDMISKLYTKQKYDPPLARNQPPIAGKILWA 630


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,670,678
Number of Sequences: 219361
Number of extensions: 347842
Number of successful extensions: 870
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)