ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCS7_YEAST (Q03529) Inositolphosphorylceramide-B C-26 hydroxylas... 117 2e-26
2AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor 30 5.6
3MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-meth... 29 9.6
4EDDF1_HUMAN (O60584) Erythroid differentiation and denucleation ... 29 9.6
5ANAG_HUMAN (P54802) Alpha-N-acetylglucosaminidase precursor (EC ... 29 9.6
6TRPE_SCHPO (O94582) Probable anthranilate synthase component 1 (... 29 9.6

>SCS7_YEAST (Q03529) Inositolphosphorylceramide-B C-26 hydroxylase (EC 1.-.-.-)|
           (IPC-B hydroxylase)
          Length = 384

 Score =  117 bits (294), Expect = 2e-26
 Identities = 61/127 (48%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
 Frame = -1

Query: 615 FLFHIETKSYWSNTA---HYLIHGCHHKHPMDSLRLVFPPAGAAILCVPFWNVVAFFASP 445
           FLFH +     SN A   H+L+HGCHH  PMD  RLV PP    ILC PF+ +V      
Sbjct: 246 FLFHFDDWLPESNIAFATHFLLHGCHHYLPMDKYRLVMPPTLFVILCAPFYKLVFALLPL 305

Query: 444 STTPALFAGGLLGYVMYDCTYYYLHHGQPSIDP-AKHLKRYHLSHHFRIQDKGFGITSSL 268
               A FAGGL GYV YD  +++LHH +  + P  + LK+YHL HH++    GFG+TS  
Sbjct: 306 YWAYAGFAGGLFGYVCYDECHFFLHHSK--LPPFMRKLKKYHLEHHYKNYQLGFGVTSWF 363

Query: 267 WDAVFGT 247
           WD VFGT
Sbjct: 364 WDEVFGT 370



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>AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor|
          Length = 1216

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -1

Query: 453 ASPSTTPALFAGGLLGYVMYDCT---YYYLH 370
           A P TT  L++    G V Y+C+   YYYLH
Sbjct: 321 AKPGTTAVLYSPEFQGSVSYNCSFTFYYYLH 351



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>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)|
          Length = 398

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 414 LLGYVMYDCTYYYLHHG 364
           LLG  +Y CT+ +LHHG
Sbjct: 108 LLGNTLYGCTFAFLHHG 124



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>EDDF1_HUMAN (O60584) Erythroid differentiation and denucleation factor 1|
          Length = 74

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 497 APAGGNTSLSESIGCLWWHPWI 562
           A AGG  SL  S+ C  W PWI
Sbjct: 34  AQAGGPASLLASLTCWGWRPWI 55



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>ANAG_HUMAN (P54802) Alpha-N-acetylglucosaminidase precursor (EC 3.2.1.50)|
           (N-acetyl-alpha-glucosaminidase) (NAG) [Contains:
           Alpha-N-acetylglucosaminidase 82 kDa form;
           Alpha-N-acetylglucosaminidase 77 kDa form]
          Length = 743

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = -1

Query: 441 TTPALFAGGLLGYVMYDCTYYYLHHGQPSIDPAKHLKRYHLSHHFRIQDKGFGITSSLWD 262
           T PA  A G +G          LH     + P+ H+K+ +L H    Q + FG+T  L  
Sbjct: 194 TGPAFLAWGRMGN---------LHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVL-P 243

Query: 261 AVFGTLPSS 235
           A  G +P +
Sbjct: 244 AFAGHVPEA 252



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>TRPE_SCHPO (O94582) Probable anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 489

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 426 FAGGLLGYVMYDCTYYY 376
           F+GG +GYV YDC  Y+
Sbjct: 104 FSGGAVGYVSYDCIKYF 120


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,976,121
Number of Sequences: 219361
Number of extensions: 1992413
Number of successful extensions: 5252
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5246
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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