ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah63a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein... 114 1e-25
2VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein... 114 1e-25
3VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta... 112 5e-25
4VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ... 110 2e-24
5VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ... 107 2e-23
6VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ... 104 1e-22
7VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ... 103 1e-22
8VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol... 101 7e-22
9VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protei... 33 0.31
10VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin 30 2.0
11TO401_ARATH (Q9LHE5) Mitochondrial import receptor subunit TOM40... 29 4.5
12TDHA_HAEIN (P44523) TonB-dependent heme receptor A precursor 29 5.9
13PEX5_PICPA (P33292) Peroxisomal targeting signal receptor (Perox... 29 5.9
14DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-reg... 29 5.9
15WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC... 29 5.9
16DYR1A_HUMAN (Q13627) Dual specificity tyrosine-phosphorylation-r... 28 7.7
17TDHA_HAEI8 (Q4QP67) TonB-dependent heme receptor A precursor 28 7.7

>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score =  114 bits (285), Expect = 1e-25
 Identities = 54/73 (73%), Positives = 62/73 (84%)
 Frame = -2

Query: 438 HSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVE 259
           HSFS+NEN ITVGTQH LDPLT++K R NNFG ASAL+QH WRPKS+ T S EVDTK+V+
Sbjct: 203 HSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVD 262

Query: 258 KSPKFGLALSLKP 220
           K  KFGLAL+LKP
Sbjct: 263 KGAKFGLALALKP 275



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>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score =  114 bits (284), Expect = 1e-25
 Identities = 53/73 (72%), Positives = 63/73 (86%)
 Frame = -2

Query: 438 HSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVE 259
           HSFSSNENT+T+GTQH LDPLTT+K R N++G ASALIQH WRPKS+ T S EVDT+A+E
Sbjct: 203 HSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIE 262

Query: 258 KSPKFGLALSLKP 220
           KS K GLA++LKP
Sbjct: 263 KSAKIGLAVALKP 275



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>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score =  112 bits (279), Expect = 5e-25
 Identities = 53/74 (71%), Positives = 62/74 (83%)
 Frame = -2

Query: 441 AHSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAV 262
           +H FS+ ENT T+GTQH LDPLTT+KGR  N G ASALIQH WRPKS+IT S+EVDTKA+
Sbjct: 202 SHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAI 261

Query: 261 EKSPKFGLALSLKP 220
           EKS K GL+L+LKP
Sbjct: 262 EKSAKIGLSLALKP 275



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>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score =  110 bits (274), Expect = 2e-24
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = -2

Query: 438 HSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVE 259
           HSFSSNEN++T GTQH LDPLT +K R+NN G ASAL+QH WRPKSV T S EVDTKA++
Sbjct: 201 HSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAID 260

Query: 258 KSPKFGLALSLKP 220
           KS K G+A++LKP
Sbjct: 261 KSSKVGIAVALKP 273



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>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score =  107 bits (266), Expect = 2e-23
 Identities = 49/74 (66%), Positives = 61/74 (82%)
 Frame = -2

Query: 441 AHSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAV 262
           +H+F++ EN ITVGTQH LDPLTT+K R NN G+A+ALIQH WRPKS  T S EVD+KA+
Sbjct: 200 SHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAI 259

Query: 261 EKSPKFGLALSLKP 220
           +KS K G+AL+LKP
Sbjct: 260 DKSAKVGIALALKP 273



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>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score =  104 bits (259), Expect = 1e-22
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = -2

Query: 441 AHSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAV 262
           +H  SS ++TITVGTQH LDPLT++K R N+ GIASALIQH W+PKS  T S EVDTK++
Sbjct: 202 SHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSI 261

Query: 261 EKSPKFGLALSLKP 220
           +KS K GLAL+LKP
Sbjct: 262 DKSAKVGLALALKP 275



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>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score =  103 bits (258), Expect = 1e-22
 Identities = 50/73 (68%), Positives = 59/73 (80%)
 Frame = -2

Query: 438 HSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVE 259
           HSFSSNEN++T GTQH LDPLT +K R NN G ASALIQH + PKS+ T S EVDTKA+E
Sbjct: 203 HSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIE 262

Query: 258 KSPKFGLALSLKP 220
           KS K G+A++LKP
Sbjct: 263 KSSKVGIAIALKP 275



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>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score =  101 bits (252), Expect = 7e-22
 Identities = 46/73 (63%), Positives = 59/73 (80%)
 Frame = -2

Query: 441 AHSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAV 262
           +HS S NE+T+  G+QH LDP TT+K R+NN+G+ASAL+QH WRPKS +T S +VDTKA+
Sbjct: 204 SHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAI 263

Query: 261 EKSPKFGLALSLK 223
           EKS K GL+L LK
Sbjct: 264 EKSTKVGLSLVLK 276



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>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin|
          Length = 282

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = -2

Query: 429 SSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAV-EKS 253
           ++N  T+ + +++ LD  T +KG+ N+ G+A+       RP   +    ++DT+ + + +
Sbjct: 212 TANAITLELASKYALDKDTFVKGKINSAGVATLSYFQTVRPGVTVGLGLQLDTQRLGQPA 271

Query: 252 PKFGLALS 229
            K GL+L+
Sbjct: 272 HKAGLSLA 279



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>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin|
          Length = 283

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/62 (22%), Positives = 33/62 (53%)
 Frame = -2

Query: 438 HSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVE 259
           +S + N   + V T++ +DP++ +KG+ N+ G+A+       R    +      DT+ ++
Sbjct: 210 NSKTGNTVGLEVATKYRIDPVSFVKGKINDRGVAAIAYNVLLREGVTLGVGASFDTQKLD 269

Query: 258 KS 253
           ++
Sbjct: 270 QA 271



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>TO401_ARATH (Q9LHE5) Mitochondrial import receptor subunit TOM40 homolog 1|
           (Translocase of outer membrane 40 kDa subunit homolog 1)
          Length = 308

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/71 (28%), Positives = 38/71 (53%)
 Frame = -2

Query: 438 HSFSSNENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVE 259
           +++ S + T +VG  + L     ++G+ ++ G+ASAL++           S E+D K  +
Sbjct: 240 YNYFSRDVTASVGYDYMLRQ-ARVRGKIDSNGVASALLEERLSMGLNFLLSAELDHK--K 296

Query: 258 KSPKFGLALSL 226
           K  KFG  L++
Sbjct: 297 KDYKFGFGLTV 307



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>TDHA_HAEIN (P44523) TonB-dependent heme receptor A precursor|
          Length = 744

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 428 RATRTPSPWGRSTSWTP*PPLRGATTTLASQV 333
           R T   +PWG++++W    P R ATT L   V
Sbjct: 620 RDTSPRNPWGKTSTWIAEIPPRKATTALGFNV 651



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>PEX5_PICPA (P33292) Peroxisomal targeting signal receptor (Peroxisomal protein|
           PAS8) (Peroxin-5) (PTS1 receptor)
          Length = 576

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 39  PVAHINWVETPRVAG*KRQISLSHHQSWALQVPSVQA-LFTGPRADGTKML 188
           PV   NW +  + AG + Q     HQ   L VP V+A ++ G R  G  M+
Sbjct: 122 PVQSTNWAQDFQQAGPEVQHHAQQHQHPILSVPGVRAGIYGGGRLMGGSMM 172



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>DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.2) (Protein kinase minibrain homolog)
           (MNBH) (RP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 122 GITSSVRPSFVHWTKS*WYQNASILMHPQIPH-QGLSDRASPNL 250
           G TS+ +PS V    S  +  A + M  Q+PH    SDR  PN+
Sbjct: 5   GETSACKPSSVRLAPSFSFHAAGLQMAAQMPHSHQYSDRRQPNI 48



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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 437  TASRATRTPSPWGRSTSWTP*PPLRGAT 354
            T SR  R+ S WGR ++    PP RGA+
Sbjct: 1302 TPSRGGRSGSNWGRGSNMNSGPPRRGAS 1329



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>DYR1A_HUMAN (Q13627) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.1) (Protein kinase minibrain homolog)
           (MNBH) (HP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 122 GITSSVRPSFVHWTKS*WYQNASILMHPQIPH-QGLSDRASPNL 250
           G TS+ +PS V    S  +  A + M  Q+PH    SDR  PN+
Sbjct: 5   GETSACKPSSVRLAPSFSFHAAGLQMAGQMPHSHQYSDRRQPNI 48



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>TDHA_HAEI8 (Q4QP67) TonB-dependent heme receptor A precursor|
          Length = 745

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 428 RATRTPSPWGRSTSWTP*PPLRGATTTLASQV 333
           R T   +PWG++++W    P R ATT L   +
Sbjct: 621 RDTSPRNPWGKTSTWIAEIPPRKATTALGFNI 652


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,673,359
Number of Sequences: 219361
Number of extensions: 1216396
Number of successful extensions: 2987
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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