ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62l03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y13190.1|HVWL5MRNA Hordeum vulgare mRNA for hypothetical pro... 581 e-163
2dbj|AK073265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129
3ref|XM_473876.1| Oryza sativa (japonica cultivar-group), predic... 466 e-128
4emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 234 2e-58
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
6gb|AY105797.1| Zea mays PCO117545 mRNA sequence 168 1e-38
7emb|AL807740.6| Human DNA sequence from clone RP11-203E14 on chr... 44 0.48
8gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.9
9gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome... 42 1.9
10ref|XM_570061.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.9
11gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome... 42 1.9
12gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Canc... 42 1.9
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
14gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park ... 42 1.9
15gb|AC012175.7| Homo sapiens chromosome 16 clone RP11-19H6, compl... 42 1.9
16dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
17ref|NM_112116.2| Arabidopsis thaliana oxidoreductase AT3G12800 m... 40 7.5
18gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosom... 40 7.5
19emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chro... 40 7.5
20emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 ... 40 7.5
21gb|AY114700.1| Arabidopsis thaliana unknown protein (At3g12790) ... 40 7.5
22gb|AC108358.3| Homo sapiens X BAC RP11-420H7 (Roswell Park Cance... 40 7.5
23gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complet... 40 7.5
24gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 40 7.5
25gb|AY072396.1| Arabidopsis thaliana unknown protein (At3g12790) ... 40 7.5
26dbj|AK221326.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 7.5
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
28gb|AF052191.1|AF052191 Strongylocentrotus purpuratus katanin p60... 40 7.5
29emb|BX842405.1|CNS0A6X3 Arabidopsis thaliana Full-length cDNA Co... 40 7.5
30emb|BX842402.1|CNS0A6U8 Arabidopsis thaliana Full-length cDNA Co... 40 7.5
31ref|NM_214568.1| Strongylocentrotus purpuratus katanin p60 (katn... 40 7.5
32gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Can... 40 7.5
33gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 7.5
34gb|AF126079.1|AF126079 Spongiobothrium sp. dev-stage adult 18S s... 40 7.5
35dbj|AK176776.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
36dbj|AK176631.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
37dbj|AK176909.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
38dbj|AK176892.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
39dbj|AK176508.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
40dbj|AK176305.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
41dbj|AK176181.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
42dbj|AK175900.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
43dbj|AK175259.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 40 7.5
44dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
45emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 7.5 
>emb|Y13190.1|HVWL5MRNA Hordeum vulgare mRNA for hypothetical protein, partial, clone WL5
          Length = 335

 Score =  581 bits (293), Expect = e-163
 Identities = 307/309 (99%), Gaps = 2/309 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcgggttacaaaatt-acgtacacaataaagtcggtgcggagcc-ctgatgacaatactg 58
           ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 309 gcgggttacaaaattcacgtacacaataaagtcggtgcggagccactgatgacaatactg 250

                                                                       
Query: 59  aagggtggtacatgacataaacgagacagtgacataaaccaaggatggcatcacaatttg 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aagggtggtacatgacataaacgagacagtgacataaaccaaggatggcatcacaatttg 190

                                                                       
Query: 119 ctggacggtacacctacaccagaggccctaaccttcttctcgatcacctttgagagctcc 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctggacggtacacctacaccagaggccctaaccttcttctcgatcacctttgagagctcc 130

                                                                       
Query: 179 ttcacttcctccttggggatgtggcgagggtgactcaaccaaagccctccatcgaccacc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttcacttcctccttggggatgtggcgagggtgactcaaccaaagccctccatcgaccacc 70

                                                                       
Query: 239 agcgtagtcccatttacatatttgcctgcatcagaagcaagatagagcgcggccattgca 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  agcgtagtcccatttacatatttgcctgcatcagaagcaagatagagcgcggccattgca 10

                    
Query: 299 atgtcccgt 307
           |||||||||
Sbjct: 9   atgtcccgt 1
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>dbj|AK073265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025B16, full
            insert sequence
          Length = 1364

 Score =  470 bits (237), Expect = e-129
 Identities = 397/449 (88%), Gaps = 1/449 (0%)
 Strand = Plus / Minus

                                                                        
Query: 107  catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 166
            |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 1145 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 1086

                                                                        
Query: 167  tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 226
            |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 1085 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 1026

                                                                        
Query: 227  ccatcgaccaccagcgtagtcccatttacatatttgcctgcatcagaagcaagatagagc 286
            ||||| || ||||  |||||||||||||||||||| ||||||||||||||||| || || 
Sbjct: 1025 ccatcaacaaccactgtagtcccatttacatattttcctgcatcagaagcaaggtaaagt 966

                                                                        
Query: 287  gcggccattgcaatgtcccgtgtctcccccaacttaaataaaggcatcatttcccttttc 346
            || ||||| || ||||||| | | || |||||||||||||||||||| |||||||   ||
Sbjct: 965  gcagccatagctatgtcccatttttcacccaacttaaataaaggcattatttcccgactc 906

                                                                        
Query: 347  cccttgcccatttcatcaggtgcaagcttcctcagtcctggagtgcctccgattggtcct 406
            |||||| ||||||| ||||||||||||||||||| ||||||||||||| | ||||| |||
Sbjct: 905  cccttggccatttcctcaggtgcaagcttcctcattcctggagtgccttcaattggccct 846

                                                                        
Query: 407  ggtgcaattccattgaccctgatttcataatctgttccccattccagagccagtgttctc 466
            ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||| 
Sbjct: 845  ggtgcaattccattgaccctgatgtcataatctgttccccattccagagccaatgatctt 786

                                                                        
Query: 467  gtgatactatcaacacctgccttagcagcagacacatgaatttggtaccaagccgcggtg 526
            || ||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 785  gttatactatcaacgcccgccttagcagcagagacatgaatttggtaccaggccgcagtg 726

                                         
Query: 527  taatgcaatgtcgcaccttatgttaatga 555
            |||||||| || ||| |||||||| ||||
Sbjct: 725  taatgcaaagtagca-cttatgttgatga 698
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>ref|XM_473876.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 900

 Score =  466 bits (235), Expect = e-128
 Identities = 395/447 (88%), Gaps = 1/447 (0%)
 Strand = Plus / Minus

                                                                       
Query: 109 tcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacctt 168
           |||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||||
Sbjct: 900 tcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacctt 841

                                                                       
Query: 169 tgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccctcc 228
           |||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||||
Sbjct: 840 tgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacctcc 781

                                                                       
Query: 229 atcgaccaccagcgtagtcccatttacatatttgcctgcatcagaagcaagatagagcgc 288
           ||| || ||||  |||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 780 atcaacaaccactgtagtcccatttacatattttcctgcatcagaagcaaggtaaagtgc 721

                                                                       
Query: 289 ggccattgcaatgtcccgtgtctcccccaacttaaataaaggcatcatttcccttttccc 348
            ||||| || ||||||| | | || |||||||||||||||||||| |||||||   ||||
Sbjct: 720 agccatagctatgtcccatttttcacccaacttaaataaaggcattatttcccgactccc 661

                                                                       
Query: 349 cttgcccatttcatcaggtgcaagcttcctcagtcctggagtgcctccgattggtcctgg 408
           |||| ||||||| ||||||||||||||||||| ||||||||||||| | ||||| |||||
Sbjct: 660 cttggccatttcctcaggtgcaagcttcctcattcctggagtgccttcaattggccctgg 601

                                                                       
Query: 409 tgcaattccattgaccctgatttcataatctgttccccattccagagccagtgttctcgt 468
           ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||| ||
Sbjct: 600 tgcaattccattgaccctgatgtcataatctgttccccattccagagccaatgatcttgt 541

                                                                       
Query: 469 gatactatcaacacctgccttagcagcagacacatgaatttggtaccaagccgcggtgta 528
            ||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 540 tatactatcaacgcccgccttagcagcagagacatgaatttggtaccaggccgcagtgta 481

                                      
Query: 529 atgcaatgtcgcaccttatgttaatga 555
           |||||| || ||| |||||||| ||||
Sbjct: 480 atgcaaagtagca-cttatgttgatga 455
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score =  234 bits (118), Expect = 2e-58
 Identities = 193/218 (88%)
 Strand = Plus / Minus

                                                                          
Query: 263    cctgcatcagaagcaagatagagcgcggccattgcaatgtcccgtgtctcccccaactta 322
              ||||||||||||||||| || || || ||||| || ||||||| | | || |||||||||
Sbjct: 156870 cctgcatcagaagcaaggtaaagtgcagccatagctatgtcccatttttcacccaactta 156811

                                                                          
Query: 323    aataaaggcatcatttcccttttccccttgcccatttcatcaggtgcaagcttcctcagt 382
              ||||||||||| |||||||   |||||||| ||||||| ||||||||||||||||||| |
Sbjct: 156810 aataaaggcattatttcccgactccccttggccatttcctcaggtgcaagcttcctcatt 156751

                                                                          
Query: 383    cctggagtgcctccgattggtcctggtgcaattccattgaccctgatttcataatctgtt 442
              |||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 156750 cctggagtgccttcaattggccctggtgcaattccattgaccctgatgtcataatctgtt 156691

                                                    
Query: 443    ccccattccagagccagtgttctcgtgatactatcaac 480
              |||||||||||||||| || ||| || |||||||||||
Sbjct: 156690 ccccattccagagccaatgatcttgttatactatcaac 156653



 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                          
Query: 107    catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 166
              |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 157290 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 157231

                                                                          
Query: 167    tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 226
              |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 157230 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 157171

                                                        
Query: 227    ccatcgaccaccagcgtagtcccatttacatatttgcctgca 268
              ||||| || ||||  |||||||||||||||||||| ||||||
Sbjct: 157170 ccatcaacaaccactgtagtcccatttacatattttcctgca 157129



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                          
Query: 486    ccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgcacctt 545
              ||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||| |||
Sbjct: 156569 ccttagcagcagagacatgaatttggtaccaggccgcagtgtaatgcaaagtagca-ctt 156511

                        
Query: 546    atgttaatga 555
              ||||| ||||
Sbjct: 156510 atgttgatga 156501
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  234 bits (118), Expect = 2e-58
 Identities = 193/218 (88%)
 Strand = Plus / Minus

                                                                            
Query: 263      cctgcatcagaagcaagatagagcgcggccattgcaatgtcccgtgtctcccccaactta 322
                ||||||||||||||||| || || || ||||| || ||||||| | | || |||||||||
Sbjct: 31174789 cctgcatcagaagcaaggtaaagtgcagccatagctatgtcccatttttcacccaactta 31174730

                                                                            
Query: 323      aataaaggcatcatttcccttttccccttgcccatttcatcaggtgcaagcttcctcagt 382
                ||||||||||| |||||||   |||||||| ||||||| ||||||||||||||||||| |
Sbjct: 31174729 aataaaggcattatttcccgactccccttggccatttcctcaggtgcaagcttcctcatt 31174670

                                                                            
Query: 383      cctggagtgcctccgattggtcctggtgcaattccattgaccctgatttcataatctgtt 442
                |||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 31174669 cctggagtgccttcaattggccctggtgcaattccattgaccctgatgtcataatctgtt 31174610

                                                      
Query: 443      ccccattccagagccagtgttctcgtgatactatcaac 480
                |||||||||||||||| || ||| || |||||||||||
Sbjct: 31174609 ccccattccagagccaatgatcttgttatactatcaac 31174572



 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                            
Query: 107      catcacaatttgctggacggtacacctacaccagaggccctaaccttcttctcgatcacc 166
                |||||||||||||| || || ||||| ||||||||||||||||||||||||||||  |||
Sbjct: 31175209 catcacaatttgcttgatggcacaccaacaccagaggccctaaccttcttctcgacaacc 31175150

                                                                            
Query: 167      tttgagagctccttcacttcctccttggggatgtggcgagggtgactcaaccaaagccct 226
                |||||||||||||||||||||||||| || || ||||||||| |||| | |||||| |||
Sbjct: 31175149 tttgagagctccttcacttcctccttcggaatatggcgagggcgacttagccaaagacct 31175090

                                                          
Query: 227      ccatcgaccaccagcgtagtcccatttacatatttgcctgca 268
                ||||| || ||||  |||||||||||||||||||| ||||||
Sbjct: 31175089 ccatcaacaaccactgtagtcccatttacatattttcctgca 31175048



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 63/70 (90%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                            
Query: 486      ccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgcacctt 545
                ||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||| |||
Sbjct: 31174488 ccttagcagcagagacatgaatttggtaccaggccgcagtgtaatgcaaagtagca-ctt 31174430

                          
Query: 546      atgttaatga 555
                ||||| ||||
Sbjct: 31174429 atgttgatga 31174420
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>gb|AY105797.1| Zea mays PCO117545 mRNA sequence
          Length = 961

 Score =  168 bits (85), Expect = 1e-38
 Identities = 179/209 (85%), Gaps = 1/209 (0%)
 Strand = Plus / Minus

                                                                       
Query: 347 cccttgcccatttcatcaggtgcaagcttcctcagtcctggagtgcctccgattggtcct 406
           ||||||| |||||| |||||||||||||||||||| || || ||| ||   |||||||| 
Sbjct: 747 cccttgctcatttcttcaggtgcaagcttcctcagccccggggtgtcttgaattggtcca 688

                                                                       
Query: 407 ggtgcaattccattgaccctgatttcataatctgttccccattccagagccagtgttctc 466
           |||||||| || ||||| || || ||||||||||||||||| ||||||||||||| ||| 
Sbjct: 687 ggtgcaatcccgttgactctaatgtcataatctgttccccactccagagccagtgatctt 628

                                                                       
Query: 467 gtgatactatcaacacctgccttagcagcagacacatgaatttggtaccaagccgcggtg 526
           ||||| |||||||| || |||||||||||||| ||||| |||||||||||||  ||  ||
Sbjct: 627 gtgatgctatcaaccccagccttagcagcagagacatggatttggtaccaagaagcactg 568

                                        
Query: 527 taatgcaatgtcgcaccttatgttaatga 555
           ||||||| ||| ||| |||||||||||||
Sbjct: 567 taatgcagtgttgca-cttatgttaatga 540



 Score =  153 bits (77), Expect = 7e-34
 Identities = 167/197 (84%), Gaps = 2/197 (1%)
 Strand = Plus / Minus

                                                                       
Query: 128 acacctacaccagaggccctaaccttcttctcgatcacctttgagagctccttcacttcc 187
           ||||| ||||||||||||||||| |||||||||| ||| ||  | || ||||| | ||||
Sbjct: 961 acaccaacaccagaggccctaactttcttctcgaccactttcaacagttccttaanttcc 902

                                                                       
Query: 188 tccttggggatgtggcgagggtgactcaaccaaagccctccatcgaccaccagcgtagtc 247
           |||||||| || |||||||||||| | | ||||  |  ||||||||||||||| || |||
Sbjct: 901 tccttgggaatntggcgagggtgatttanccaagac--tccatcgaccaccagtgttgtc 844

                                                                       
Query: 248 ccatttacatatttgcctgcatcagaagcaagatagagcgcggccattgcaatgtcccgt 307
           ||||||||||||||||||||||||||||  || |||||||| |||||||| |||||||| 
Sbjct: 843 ccatttacatatttgcctgcatcagaagtcaggtagagcgcagccattgctatgtcccgc 784

                            
Query: 308 gtctcccccaacttaaa 324
            ||||||| || |||||
Sbjct: 783 ttctccccaaatttaaa 767
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>emb|AL807740.6| Human DNA sequence from clone RP11-203E14 on chromosome X, complete
             sequence
          Length = 166548

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 478   aacacctgccttagcagcagac 499
             ||||||||||||||||||||||
Sbjct: 50529 aacacctgccttagcagcagac 50550
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 343     tttccccttgcccatttcatc 363
               |||||||||||||||||||||
Sbjct: 1392063 tttccccttgcccatttcatc 1392043
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>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     tgacataaaccaaggatggca 108
              |||||||||||||||||||||
Sbjct: 110400 tgacataaaccaaggatggca 110380
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>ref|XM_570061.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND05100) partial mRNA
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 343 tttccccttgcccatttcatc 363
           |||||||||||||||||||||
Sbjct: 601 tttccccttgcccatttcatc 621
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>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     tgacataaaccaaggatggca 108
              |||||||||||||||||||||
Sbjct: 155720 tgacataaaccaaggatggca 155740
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>gb|AC158593.8| Mus musculus 10 BAC RP23-197F5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216621

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    ctacaccagaggccctaacct 152
              |||||||||||||||||||||
Sbjct: 170576 ctacaccagaggccctaacct 170596
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 246      tcccatttacatatttgcctg 266
                |||||||||||||||||||||
Sbjct: 36320795 tcccatttacatatttgcctg 36320775
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>gb|AC078930.13|AC078930 Mus musculus 10 BAC 280B6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 226168

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    ctacaccagaggccctaacct 152
              |||||||||||||||||||||
Sbjct: 173449 ctacaccagaggccctaacct 173469
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>gb|AC012175.7| Homo sapiens chromosome 16 clone RP11-19H6, complete sequence
          Length = 180634

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   ccttttccccttgcccatttc 360
             |||||||||||||||||||||
Sbjct: 36741 ccttttccccttgcccatttc 36721
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>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   tcccatttacatatttgcctg 266
             |||||||||||||||||||||
Sbjct: 70672 tcccatttacatatttgcctg 70652
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>ref|NM_112116.2| Arabidopsis thaliana oxidoreductase AT3G12800 mRNA, complete cds
          Length = 1067

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 552 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 497
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>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete
             sequence
          Length = 190119

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   gggatgtggcgagggtgact 213
             ||||||||||||||||||||
Sbjct: 49479 gggatgtggcgagggtgact 49460
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>emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chromosome 1 Contains the
             3' end of a novel gene and a novel gene, complete sequence
          Length = 186710

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tttccccttgcccatttcat 362
             ||||||||||||||||||||
Sbjct: 44004 tttccccttgcccatttcat 43985
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>emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 on chromosome 20 Contains an
            autophagy Apg3p/Aut1p-like (APG3) pseudogene, complete
            sequence
          Length = 84871

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  attccagagccagtgttctc 466
            ||||||||||||||||||||
Sbjct: 8092 attccagagccagtgttctc 8073
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>gb|AY114700.1| Arabidopsis thaliana unknown protein (At3g12790) mRNA, complete cds
          Length = 980

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 521 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 466
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>gb|AC108358.3| Homo sapiens X BAC RP11-420H7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 43632

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   attggtcctggtgcaattcc 417
             ||||||||||||||||||||
Sbjct: 43373 attggtcctggtgcaattcc 43354
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>gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complete sequence
          Length = 128233

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    agtcccatttacatatttgc 263
              ||||||||||||||||||||
Sbjct: 117426 agtcccatttacatatttgc 117407
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>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tttccccttgcccatttcat 362
             ||||||||||||||||||||
Sbjct: 94863 tttccccttgcccatttcat 94844
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>gb|AY072396.1| Arabidopsis thaliana unknown protein (At3g12790) mRNA, complete cds
          Length = 1065

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 551 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 496
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>dbj|AK221326.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL25-15-M23
          Length = 990

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 529 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 474
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 338      tcccttttccccttgcccat 357
                ||||||||||||||||||||
Sbjct: 15395047 tcccttttccccttgcccat 15395066
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>gb|AF052191.1|AF052191 Strongylocentrotus purpuratus katanin p60 subunit mRNA, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  tcctccttggggatgtggcg 204
            ||||||||||||||||||||
Sbjct: 1430 tcctccttggggatgtggcg 1411
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>emb|BX842405.1|CNS0A6X3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH44ZB12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 972

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||| ||||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 514 gccttggctgcacacacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 459
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>emb|BX842402.1|CNS0A6U8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH79ZA10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 996

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 519 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 464
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>ref|NM_214568.1| Strongylocentrotus purpuratus katanin p60 (katn), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  tcctccttggggatgtggcg 204
            ||||||||||||||||||||
Sbjct: 1430 tcctccttggggatgtggcg 1411
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>gb|AC078988.18| Homo sapiens X BAC RP11-169J21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169849

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    attggtcctggtgcaattcc 417
              ||||||||||||||||||||
Sbjct: 168113 attggtcctggtgcaattcc 168132
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>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 186    cctccttggggatgtggcgagggt 209
              ||||| ||||||||||||||||||
Sbjct: 148702 cctccctggggatgtggcgagggt 148725
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>gb|AF126079.1|AF126079 Spongiobothrium sp. dev-stage adult 18S small subunit ribosomal RNA
           gene, partial sequence
          Length = 583

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 134 acaccagaggccctaaccttcttc 157
           ||||||||||||||| ||||||||
Sbjct: 294 acaccagaggccctacccttcttc 271
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>dbj|AK176776.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-32-F21
          Length = 990

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 529 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 474
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>dbj|AK176631.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-17-A04
          Length = 1052

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 527 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 472
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>dbj|AK176909.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-48-H19
          Length = 1010

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 549 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 494
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>dbj|AK176892.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-45-I06
          Length = 1058

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 533 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 478
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>dbj|AK176508.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-02-P03
          Length = 1010

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 549 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 494
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>dbj|AK176305.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-26-D11
          Length = 1074

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 549 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 494
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>dbj|AK176181.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-04-O07
          Length = 1077

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 552 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 497
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>dbj|AK175900.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-54-F22
          Length = 1068

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 543 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 488
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>dbj|AK175259.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-69-H07
          Length = 1077

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 485 gccttagcagcagacacatgaatttggtaccaagccgcggtgtaatgcaatgtcgc 540
           ||||| || ||||| ||||| |||||||||||||  || ||||| ||||| |||||
Sbjct: 552 gccttggctgcagagacatgtatttggtaccaagaagccgtgtagtgcaaagtcgc 497
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>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0613F06
          Length = 184289

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   tcccttttccccttgcccat 357
             ||||||||||||||||||||
Sbjct: 62562 tcccttttccccttgcccat 62581
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    ggcatcatttcccttttccc 348
              ||||||||||||||||||||
Sbjct: 115001 ggcatcatttcccttttccc 115020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,591,897
Number of Sequences: 3902068
Number of extensions: 4591897
Number of successful extensions: 78202
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78076
Number of HSP's gapped (non-prelim): 122
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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