>MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14) (Protein|
           APETALA1-like B) (Protein AGAMOUS-like 10) (FDRMADS6)
           (RMADS211)
          Length = 246

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 50/91 (54%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = -2

Query: 598 KKERSLQEENKVLQKELVEKQKXXXXXXXXXXXX--XXXXXXSFMMRDAPPVADTSNHPA 425
           +KE+SLQEENKVLQKELVEKQK                    SFMMR+A P  + SN+PA
Sbjct: 156 RKEKSLQEENKVLQKELVEKQKVQKQQVQWDQTQPQTSSSSSSFMMREALPTTNISNYPA 215

Query: 424 AAGERAEDVAVQPQVPLRTALPLWMVSHING 332
           AAGER EDVA      +R  LP WM+SHING
Sbjct: 216 AAGERIEDVAAGQPQHVRIGLPPWMLSHING 246

>MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15) (Protein|
           APETALA1-like A) (FDRMADS3) (RMADS215)
          Length = 267

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 44/111 (39%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
 Frame = -2

Query: 598 KKERSLQEENKVLQKELVEKQK--------------XXXXXXXXXXXXXXXXXXSFMMRD 461
           KKERSLQEENK LQKELVE+QK                                S M+RD
Sbjct: 156 KKERSLQEENKALQKELVERQKNVRGQQQVGQWDQTQVQAQAQAQPQAQTSSSSSSMLRD 215

Query: 460 APPVADTSN---HPAAAGER-----AEDVAVQPQVPLRT-ALPLWMVSHIN 335
              +    N    P   GER     A  VA Q QV LR   LP WM+SH+N
Sbjct: 216 QQALLPPQNICYPPVMMGERNDAAAAAAVAAQGQVQLRIGGLPPWMLSHLN 266

>AGL8_SOLCO (O22328) Agamous-like MADS-box protein AGL8 homolog|
          Length = 250

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
 Frame = -2

Query: 598 KKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXXXXXXXSFMMR---DAPPVADTSNHP 428
           K++R+LQE+N  L K++ E++K                  +F++    D+P + + S + 
Sbjct: 156 KQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQNHEINSSTFVLPQQLDSPHLGEASQNT 215

Query: 427 AAA--GERAEDVAVQPQ-VPLRTALPLWMVSHING 332
                GE     + Q Q     T +P WMV H+NG
Sbjct: 216 NVVDNGEVEGGNSSQXQGAANNTVMPQWMVRHLNG 250

>AGL8_SOLTU (Q42429) Agamous-like MADS-box protein AGL8 homolog (POTM1-1)|
          Length = 250

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
 Frame = -2

Query: 598 KKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXXXXXXXSFMMR---DAPPVADTSNHP 428
           K++R+LQE+N  L K++ E++K                  +F++    D+P + +   + 
Sbjct: 156 KQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQNHEINSSTFVLPQQLDSPHLGEAYQNT 215

Query: 427 AAA--GERAEDVAVQPQ-VPLRTALPLWMVSHING 332
                GE     + Q Q     T +P WM+ H+NG
Sbjct: 216 NVVDNGEVEGGNSSQQQGAANNTVMPQWMLRHLNG 250

>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)|
          Length = 717

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
 Frame = +3

Query: 33  IHRNNTQEQRVSSKVENSSL-MLHINYMVDYSYSHL-----------SPGGKETEVDEVK 176
           I  NN      ++K++N+S  MLH+ ++ D+SY+             +P   + E+D V 
Sbjct: 358 ITTNNNNSNNKNNKLKNNSNGMLHMMHITDHSYTRCNDMVDDGPNLETPSDSDEEIDVVS 417

Query: 177 YT 182
           YT
Sbjct: 418 YT 419

>PRGR_RABIT (P06186) Progesterone receptor (PR)|
          Length = 930

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 505 EFDLAAPPGPSASPQVPSGELYSPPAVTSP 594
           +F LAAPP PS  P+VPS          SP
Sbjct: 415 DFQLAAPPPPSLPPRVPSSRPGEAAVAASP 444

>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,|
            muscle-specific form (Alpha-NAC, muscle-specific form)
          Length = 2187

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 457  EHPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSGELYSPPAVTSP 594
            ++PSS +K  K+    E     PP P+ SP++PS +    P  ++P
Sbjct: 1555 KNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSK--KAPRTSAP 1598

>FCTA_STRAW (Q82M40) Probable formyl-coenzyme A transferase (EC 2.8.3.16)|
           (Formyl-CoA transferase)
          Length = 409

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
 Frame = +1

Query: 265 PGWPVQLVTR-TE*YAYM-----GWKPFSR*CGSPSTVEAPSGVGPEA 390
           PGW V+        Y Y+     GWKP S   G P   + P    PEA
Sbjct: 245 PGWAVKCAPGGPNDYVYVIVQPVGWKPLSELIGRPELADDPEWATPEA 292

>AP1_ARATH (P35631) Floral homeotic protein APETALA1 (Agamous-like MADS-box|
           protein AGL7)
          Length = 256

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 10/22 (45%), Positives = 19/22 (86%)
 Frame = -2

Query: 598 KKERSLQEENKVLQKELVEKQK 533
           KKE+++QE+N +L K++ E++K
Sbjct: 156 KKEKAIQEQNSMLSKQIKEREK 177

>LOZEN_DROME (Q9W349) Protein lozenge|
          Length = 826

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 454 PVADTSNHPAAAGERAEDVAVQPQVPLRTALPL 356
           P A  S H  AAGE   D+A Q +  L+  LPL
Sbjct: 23  PSASPSGHTGAAGESQLDLASQTESQLQLGLPL 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,201,675
Number of Sequences: 219361
Number of extensions: 1824491
Number of successful extensions: 5623
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5609
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)