ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62k23 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 1142 bits (576), Expect = 0.0 Identities = 588/592 (99%) Strand = Plus / Minus Query: 8 cacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaacgggtatc 67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1196 cacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaacggatatc 1137 Query: 68 atcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgta 127 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 atcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgta 1077 Query: 128 cagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 cagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattc 1017 Query: 188 ctgcagcttgctactttactctgatttcttttcctctcccctccatggggttagcatgtt 247 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 ctgcagcttgctgctttactctgatttcttttcctctcccctccatggggttagcatgtt 957 Query: 248 cgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaatagtacg 307 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 956 cgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaatagtacg 897 Query: 308 cttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgc 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 cttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgc 837 Query: 368 cgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgc 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 cgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgc 777 Query: 428 tgggtgattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaaga 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 tgggtgattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaaga 717 Query: 488 agagctggtttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 agagctggtttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 657 Query: 548 aagttccttctggagaactttattctcctcctgcagtgacctctccttcttc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 aagttccttctggagaactttattctcctcctgcagtgacctctccttcttc 605
>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds Length = 1153 Score = 1100 bits (555), Expect = 0.0 Identities = 558/559 (99%) Strand = Plus / Minus Query: 41 aaacaacacccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctaca 100 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1153 aaacaacacccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctaca 1094 Query: 101 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1093 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 1034 Query: 161 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1033 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 974 Query: 221 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 973 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 914 Query: 281 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 854 Query: 341 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 794 Query: 401 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 734 Query: 461 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 674 Query: 521 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 614 Query: 581 cagtgacctctccttcttc 599 ||||||||||||||||||| Sbjct: 613 cagtgacctctccttcttc 595
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete cds Length = 1145 Score = 1100 bits (555), Expect = 0.0 Identities = 558/559 (99%) Strand = Plus / Minus Query: 41 aaacaacacccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctaca 100 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1145 aaacaacacccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctaca 1086 Query: 101 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 1026 Query: 161 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1025 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 966 Query: 221 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 965 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 906 Query: 281 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 846 Query: 341 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 786 Query: 401 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 726 Query: 461 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 666 Query: 521 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 606 Query: 581 cagtgacctctccttcttc 599 ||||||||||||||||||| Sbjct: 605 cagtgacctctccttcttc 587
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 1092 bits (551), Expect = 0.0 Identities = 557/559 (99%) Strand = Plus / Minus Query: 41 aaacaacacccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctaca 100 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1157 aaacaacacccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctaca 1098 Query: 101 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1097 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 1038 Query: 161 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1037 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 978 Query: 221 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 977 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgc 918 Query: 281 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 858 Query: 341 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 798 Query: 401 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 738 Query: 461 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 678 Query: 521 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 618 Query: 581 cagtgacctctccttcttc 599 ||||||||||||||||||| Sbjct: 617 cagtgacctctccttcttc 599
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds Length = 1153 Score = 1092 bits (551), Expect = 0.0 Identities = 557/559 (99%) Strand = Plus / Minus Query: 41 aaacaacacccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctaca 100 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1153 aaacaacacccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctaca 1094 Query: 101 tataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 160 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1093 aataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactga 1034 Query: 161 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1033 ggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttc 974 Query: 221 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 973 ctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgc 914 Query: 281 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 aacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgat 854 Query: 341 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 gtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccac 794 Query: 401 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 atcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagc 734 Query: 461 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 atccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctg 674 Query: 521 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 cgccgcctgggccttctgcttctccacaagttccttctggagaactttattctcctcctg 614 Query: 581 cagtgacctctccttcttc 599 ||||||||||||||||||| Sbjct: 613 cagtgacctctccttcttc 595
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1105 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1105 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1046 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 986 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 926 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 925 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 866 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 806 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 746 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 686 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 626 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 566 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 565 ctctccttcttc 554
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1117 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1058 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 998 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 938 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 878 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 818 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 758 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 698 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 638 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 578 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 577 ctctccttcttc 566
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1086 bits (548), Expect = 0.0 Identities = 551/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1113 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1054 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 994 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 934 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 874 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 814 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 754 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 694 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 634 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 574 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 573 ctctccttcttc 562
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 1078 bits (544), Expect = 0.0 Identities = 550/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1117 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1058 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 998 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 938 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 937 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgt 878 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 818 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 758 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 698 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 638 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 578 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 577 ctctccttcttc 566
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 1078 bits (544), Expect = 0.0 Identities = 550/552 (99%) Strand = Plus / Minus Query: 48 acccaggagcaacgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaat 107 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1117 acccaggagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaat 1058 Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 998 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 938 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 937 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgt 878 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 818 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 758 Query: 408 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctc 698 Query: 468 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 atcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcc 638 Query: 528 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 tgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgac 578 Query: 588 ctctccttcttc 599 |||||||||||| Sbjct: 577 ctctccttcttc 566
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1151 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 72 aaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtacagc 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 aaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtacagc 1067 Query: 132 catctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgc 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 catctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgc 1007 Query: 192 agcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttcgca 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 agcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttcgca 947 Query: 252 accgcatgatacaccaggctggccggtgcaacttgttactcgtactgaatagtacgctta 311 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 946 accgcatgatacaccaggctggccgctgcaacttgttactcgtactgaatagtacgctta 887 Query: 312 catgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 catgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtc 827 Query: 372 cggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctggg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 cggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctggg 767 Query: 432 tgattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagag 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 tgattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagag 707 Query: 492 ctggtttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaagt 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 ctggtttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaagt 647 Query: 552 tccttctggagaactttattctcctcctgcagtgacctctccttcttc 599 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 tccttctggagaactttattctcctcctgcagtgacctctccttcttc 599
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 856 bits (432), Expect = 0.0 Identities = 438/440 (99%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11261 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 11202 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11201 gggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 11142 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11141 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 11082 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11081 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 11022 Query: 241 gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 11021 gcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaa 10962 Query: 301 tagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10961 tagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtg 10902 Query: 361 gaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10901 gaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctg 10842 Query: 421 ccgccgctgggtgattgctg 440 |||||||||||||||||||| Sbjct: 10841 ccgccgctgggtgattgctg 10822 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10574 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 10515 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10514 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 10462 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10372 ttccttctggagaactttattctcctcctgcagtgacctctcct 10329
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 856 bits (432), Expect = 0.0 Identities = 438/440 (99%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62982 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 62923 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62922 gggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 62863 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62862 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 62803 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62802 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 62743 Query: 241 gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 62742 gcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaa 62683 Query: 301 tagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62682 tagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtg 62623 Query: 361 gaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62622 gaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctg 62563 Query: 421 ccgccgctgggtgattgctg 440 |||||||||||||||||||| Sbjct: 62562 ccgccgctgggtgattgctg 62543 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62295 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 62236 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62235 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 62183 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62093 ttccttctggagaactttattctcctcctgcagtgacctctcct 62050
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 856 bits (432), Expect = 0.0 Identities = 438/440 (99%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12031 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 11972 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11971 gggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 11912 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11911 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 11852 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11851 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 11792 Query: 241 gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 11791 gcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaa 11732 Query: 301 tagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11731 tagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtg 11672 Query: 361 gaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11671 gaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctg 11612 Query: 421 ccgccgctgggtgattgctg 440 |||||||||||||||||||| Sbjct: 11611 ccgccgctgggtgattgctg 11592 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11344 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 11285 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11284 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 11232 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11142 ttccttctggagaactttattctcctcctgcagtgacctctcct 11099
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 821 bits (414), Expect = 0.0 Identities = 417/418 (99%) Strand = Plus / Minus Query: 23 cgataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaa 82 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 17220 cgataggttaattcacagaaacaacacccaggagcaacgggtatcatcgaaagttgaaaa 17161 Query: 83 ttcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccc 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17160 ttcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccc 17101 Query: 143 aggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctact 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17100 aggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctact 17041 Query: 203 ttactctgatttcttttcctctcccctccatggggttagcatgttcgcaaccgcatgata 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17040 ttactctgatttcttttcctctcccctccatggggttagcatgttcgcaaccgcatgata 16981 Query: 263 caccaggctggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctgga 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16980 caccaggctggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctgga 16921 Query: 323 agcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggac 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16920 agcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggac 16861 Query: 383 ctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16860 ctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 16803 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16555 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 16496 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16495 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 16443 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16353 ttccttctggagaactttattctcctcctgcagtgacctctcct 16310
>emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for putative MADS-box transcription factor (mads#11 gene) Length = 770 Score = 674 bits (340), Expect = 0.0 Identities = 496/544 (91%), Gaps = 3/544 (0%) Strand = Plus / Minus Query: 59 acgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 118 ||||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 750 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 691 Query: 119 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 178 |||||||||||||||||||||||||| ||| | |||||||||||||||| ||| |||||| Sbjct: 690 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagcgaaata 631 Query: 179 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccat-gggg 237 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 630 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 571 Query: 238 ttag-catgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcg-ta 295 | || | || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 570 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 511 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 510 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 451 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 450 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 391 Query: 416 gcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatgaa 475 ||||| |||||||| ||| ||||||||| |||| |||||||||||||||||| |||||| Sbjct: 390 gcctgttgccgctggatgaatgctggtatttgcggcagggggagcatccctcagcatgaa 331 Query: 476 ggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcctt 535 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 330 ggaagaagatgaagagctggtttgaggctgagtttgatcttgctgcgccgcatgggcctt 271 Query: 536 ctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcctt 595 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ctgcttctccacgagttccttctggagaactttattctcctcctgcagtgacctctcctt 211 Query: 596 cttc 599 |||| Sbjct: 210 cttc 207
>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor, complete cds Length = 1161 Score = 626 bits (316), Expect = e-176 Identities = 429/464 (92%), Gaps = 2/464 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 1002 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 943 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 942 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 883 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 882 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 823 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 822 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 763 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 762 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 703 Query: 436 tgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctgg 495 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 702 tgctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttg 643 Query: 496 tttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaagttcct 555 ||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 642 tttgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctcgacgagttcct 583 Query: 556 tctggagaactttattctcctcctgcagtgacctctccttcttc 599 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 tctggagaactttattctcctcctgcagtgacctctccttcttc 539 Score = 113 bits (57), Expect = 7e-22 Identities = 103/117 (88%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaaca-cccaggagcaa 59 |||||||||||| ||||||||| |||||||||||||||| |||||||| |||| || | Sbjct: 1124 caatatacacaatgctcatatttgataggttaattcacataaacaacatcccactagaga 1065 Query: 60 cgggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggta 116 |||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 1064 cgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 1008
>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds Length = 1210 Score = 618 bits (312), Expect = e-174 Identities = 428/464 (92%), Gaps = 2/464 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1077 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 1018 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 1017 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 958 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 957 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 898 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 897 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 838 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 837 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 778 Query: 436 tgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctgg 495 |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 777 tgctggtagttgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttg 718 Query: 496 tttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaagttcct 555 ||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||||| Sbjct: 717 tttgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctcgacgagttcct 658 Query: 556 tctggagaactttattctcctcctgcagtgacctctccttcttc 599 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 tctggagaactttattctcctcctgcagtgacctctccttcttc 614 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 6 tacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaacgggta 65 ||||||| ||||||||| |||||||||||||||| ||||||||||| | ||||||| Sbjct: 1193 tacacaatgctcatatttgataggttaattcacataaacaacacccgctcgagacgggta 1134 Query: 66 tcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggta 116 |||| ||| |||||||||| ||||||| |||||||||| ||||||||||| Sbjct: 1133 tcatggaaacttgaaaattcatcactcaagctacatatagattacatggta 1083
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 573 bits (289), Expect = e-160 Identities = 322/333 (96%) Strand = Plus / Minus Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3791 tacatggtaatttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggac 3732 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3731 gaagtgaaatatacacattgctgcagcttgctactttactctgatttcttttcctctccc 3672 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3671 ctccatggggttagcgtgttcgcaaccgcatgatacaccagtctggccggtgcaacttgt 3612 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3611 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 3552 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3551 accatccacagtggaagcgccgtccggagtgggatctgaggctgcactgccacatcctct 3492 Query: 408 gccctctcgcctgccgccgctgggtgattgctg 440 |||||| ||||| |||||||||||| |||||| Sbjct: 3491 gccctcacgcctatcgccgctgggtgtttgctg 3459 Score = 208 bits (105), Expect = 2e-50 Identities = 111/113 (98%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3292 ctggtatctgcggcagggggagcatccctcaacatgaaggaagaagaagaagagctggtt 3233 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3232 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 3180 Score = 172 bits (87), Expect = 8e-40 Identities = 102/107 (95%) Strand = Plus / Minus Query: 4 tatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaacggg 63 |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 3989 tatacacaaccctcatatttgataggttaattcacagaaacaacacccaggagctacggg 3930 Query: 64 tatcatcaaaagttgaaaattcgtcactcatgctacatataaattac 110 |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3929 tatcatggaaagttgaaaattcgtcactcatgctacatataaattac 3883 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3090 ttccttctggagaactttattctcctcctgcagtgacctctcct 3047
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 573 bits (289), Expect = e-160 Identities = 322/333 (96%) Strand = Plus / Minus Query: 108 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 167 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3839 tacatggtaatttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggac 3780 Query: 168 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 227 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3779 gaagtgaaatatacacattgctgcagcttgctactttactctgatttcttttcctctccc 3720 Query: 228 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 287 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3719 ctccatggggttagcgtgttcgcaaccgcatgatacaccagtctggccggtgcaacttgt 3660 Query: 288 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3659 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 3600 Query: 348 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 407 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3599 accatccacagtggaagcgccgtccggagtgggatctgaggctgcactgccacatcctct 3540 Query: 408 gccctctcgcctgccgccgctgggtgattgctg 440 |||||| ||||| |||||||||||| |||||| Sbjct: 3539 gccctcacgcctatcgccgctgggtgtttgctg 3507 Score = 208 bits (105), Expect = 2e-50 Identities = 111/113 (98%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3340 ctggtatctgcggcagggggagcatccctcaacatgaaggaagaagaagaagagctggtt 3281 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3280 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 3228 Score = 151 bits (76), Expect = 3e-33 Identities = 85/88 (96%) Strand = Plus / Minus Query: 23 cgataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaa 82 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 4018 cgataggttaattcacagaaacaacacccaggagctacgggtatcatggaaagttgaaaa 3959 Query: 83 ttcgtcactcatgctacatataaattac 110 |||||||||||||||||||||||||||| Sbjct: 3958 ttcgtcactcatgctacatataaattac 3931 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3138 ttccttctggagaactttattctcctcctgcagtgacctctcct 3095
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1155 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1095 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1035 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 975 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 974 gcctgccgccgctgggtgattgctg 950 Score = 161 bits (81), Expect = 3e-36 Identities = 81/81 (100%) Strand = Plus / Minus Query: 470 catgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctg 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 catgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctg 658 Query: 530 ggccttctgcttctccacaag 550 ||||||||||||||||||||| Sbjct: 657 ggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattctcctcctgcagtgacctctcct 503
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattctcctcctgcagtgacctctcct 503
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1200 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1140 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1080 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1020 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1019 gcctgccgccgctgggtgattgctg 995 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattctcctcctgcagtgacctctcct 503
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1200 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1140 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1080 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1020 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1019 gcctgccgccgctgggtgattgctg 995 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattctcctcctgcagtgacctctcct 504
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattctcctcctgcagtgacctctcct 503
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattctcctcctgcagtgacctctcct 503
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattctcctcctgcagtgacctctcct 505
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattctcctcctgcagtgacctctcct 505
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattctcctcctgcagtgacctctcct 505
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattctcctcctgcagtgacctctcct 505
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 176 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 236 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 296 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 356 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 416 gcctgccgccgctgggtgattgctg 440 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 224 bits (113), Expect = 3e-55 Identities = 113/113 (100%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattctcctcctgcagtgacctctcct 505
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 488 bits (246), Expect = e-134 Identities = 395/442 (89%), Gaps = 2/442 (0%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||| ||||||| | |||||||||||||||| ||||||||||||| || || Sbjct: 15836 caatatacacaatgctcatagttgataggttaattcacataaacaacacccagtagagac 15777 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 ||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||| ||| Sbjct: 15776 gggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaatt 15717 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||||| Sbjct: 15716 actcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaatata 15657 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 ||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| | Sbjct: 15656 cacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggtca 15597 Query: 241 -gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtactg 298 || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 15596 ggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctactg 15537 Query: 299 aatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacag 358 |||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| | Sbjct: 15536 aatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccacgg 15477 Query: 359 tggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcc 418 ||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 15476 tggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcgcc 15417 Query: 419 tgccgccgctgggtgattgctg 440 |||||||||||| ||| ||||| Sbjct: 15416 tgccgccgctggatgaatgctg 15395 Score = 186 bits (94), Expect = 6e-44 Identities = 106/110 (96%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 15230 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 15171 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15170 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 15121 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15025 ttccttctggagaactttattctcctcctgcagtgacctctcct 14982
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 488 bits (246), Expect = e-134 Identities = 395/442 (89%), Gaps = 2/442 (0%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||| ||||||| | |||||||||||||||| ||||||||||||| || || Sbjct: 15300 caatatacacaatgctcatagttgataggttaattcacataaacaacacccagtagagac 15241 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 ||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||| ||| Sbjct: 15240 gggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaatt 15181 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||||| Sbjct: 15180 actcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaatata 15121 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 ||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| | Sbjct: 15120 cacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggtca 15061 Query: 241 -gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtactg 298 || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 15060 ggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctactg 15001 Query: 299 aatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacag 358 |||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| | Sbjct: 15000 aatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccacgg 14941 Query: 359 tggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcc 418 ||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 14940 tggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcgcc 14881 Query: 419 tgccgccgctgggtgattgctg 440 |||||||||||| ||| ||||| Sbjct: 14880 tgccgccgctggatgaatgctg 14859 Score = 186 bits (94), Expect = 6e-44 Identities = 106/110 (96%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14694 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 14635 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14634 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 14585 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14489 ttccttctggagaactttattctcctcctgcagtgacctctcct 14446
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 488 bits (246), Expect = e-134 Identities = 395/442 (89%), Gaps = 2/442 (0%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||| ||||||| | |||||||||||||||| ||||||||||||| || || Sbjct: 15821 caatatacacaatgctcatagttgataggttaattcacataaacaacacccagtagagac 15762 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 ||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||| ||| Sbjct: 15761 gggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaatt 15702 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||||| Sbjct: 15701 actcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaatata 15642 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 ||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| | Sbjct: 15641 cacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggtca 15582 Query: 241 -gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtactg 298 || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 15581 ggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctactg 15522 Query: 299 aatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacag 358 |||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| | Sbjct: 15521 aatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccacgg 15462 Query: 359 tggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcc 418 ||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 15461 tggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcgcc 15402 Query: 419 tgccgccgctgggtgattgctg 440 |||||||||||| ||| ||||| Sbjct: 15401 tgccgccgctggatgaatgctg 15380 Score = 186 bits (94), Expect = 6e-44 Identities = 106/110 (96%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 15215 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 15156 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15155 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 15106 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15010 ttccttctggagaactttattctcctcctgcagtgacctctcct 14967
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 488 bits (246), Expect = e-134 Identities = 395/442 (89%), Gaps = 2/442 (0%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaacaacacccaggagcaac 60 |||||||||||| ||||||| | |||||||||||||||| ||||||||||||| || || Sbjct: 82372 caatatacacaatgctcatagttgataggttaattcacataaacaacacccagtagagac 82313 Query: 61 gggtatcatcaaaagttgaaaattcgtcactcatgctacatataaattacatggtagatt 120 ||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||| ||| Sbjct: 82312 gggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaatt 82253 Query: 121 actcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatata 180 |||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||||| Sbjct: 82252 actcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaaatata 82193 Query: 181 cacattcctgcagcttgctactttactctgatttcttttcctctcccctccatggggtta 240 ||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| | Sbjct: 82192 cacatcgctgcagcttgctactttactctgatttcttttccttttccctccaaggggtca 82133 Query: 241 -gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-gtactg 298 || || | ||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 82132 ggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctctactg 82073 Query: 299 aatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatccacag 358 |||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| | Sbjct: 82072 aatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatccacgg 82013 Query: 359 tggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcc 418 ||||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 82012 tggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctcgcc 81953 Query: 419 tgccgccgctgggtgattgctg 440 |||||||||||| ||| ||||| Sbjct: 81952 tgccgccgctggatgaatgctg 81931 Score = 186 bits (94), Expect = 6e-44 Identities = 106/110 (96%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81766 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 81707 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 81706 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 81657 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81561 ttccttctggagaactttattctcctcctgcagtgacctctcct 81518
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 452 bits (228), Expect = e-124 Identities = 375/420 (89%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||||| || ||||||||||| ||| |||||||| Sbjct: 12460 gataggttaattcacataaacaacacccagtagagacgggtatcatggaaacttgaaaat 12401 Query: 84 tcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccca 143 || ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 12400 tcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccca 12341 Query: 144 ggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactt 203 | ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 12340 gctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactt 12281 Query: 204 tactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatgat 261 ||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| || Sbjct: 12280 tactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaacat 12221 Query: 262 acaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggctg 320 ||||||||||||||||||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 12220 acaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggctg 12161 Query: 321 gaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtggg 380 || |||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 12160 gatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtggg 12101 Query: 381 acctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| ||||| Sbjct: 12100 gcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgctg 12041 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 11878 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 11819 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11818 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 11769 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11673 ttccttctggagaactttattctcctcctgcagtgacctctcct 11630
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 452 bits (228), Expect = e-124 Identities = 375/420 (89%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||||| || ||||||||||| ||| |||||||| Sbjct: 12229 gataggttaattcacataaacaacacccagtagagacgggtatcatggaaacttgaaaat 12170 Query: 84 tcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccca 143 || ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 12169 tcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccca 12110 Query: 144 ggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactt 203 | ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 12109 gctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactt 12050 Query: 204 tactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatgat 261 ||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| || Sbjct: 12049 tactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaacat 11990 Query: 262 acaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggctg 320 ||||||||||||||||||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 11989 acaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggctg 11930 Query: 321 gaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtggg 380 || |||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 11929 gatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtggg 11870 Query: 381 acctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| ||||| Sbjct: 11869 gcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgctg 11810 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 11647 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 11588 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11587 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 11538 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11442 ttccttctggagaactttattctcctcctgcagtgacctctcct 11399
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 452 bits (228), Expect = e-124 Identities = 375/420 (89%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||||| || ||||||||||| ||| |||||||| Sbjct: 6726 gataggttaattcacataaacaacacccagtagagacgggtatcatggaaacttgaaaat 6667 Query: 84 tcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccca 143 || ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 6666 tcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccca 6607 Query: 144 ggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactt 203 | ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 6606 gctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactt 6547 Query: 204 tactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatgat 261 ||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| || Sbjct: 6546 tactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaacat 6487 Query: 262 acaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggctg 320 ||||||||||||||||||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 6486 acaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggctg 6427 Query: 321 gaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtggg 380 || |||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 6426 gatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtggg 6367 Query: 381 acctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| ||||| Sbjct: 6366 gcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgctg 6307 Score = 170 bits (86), Expect = 3e-39 Identities = 104/110 (94%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 6144 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 6085 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 6084 tgaggctgagtttgatcttgctgcgccacatgggccttctgcttctccac 6035 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5940 ttccttctggagaactttattctcctcctgcagtgacctctcct 5897
>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1) gene, complete cds Length = 5065 Score = 452 bits (228), Expect = e-124 Identities = 375/420 (89%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||||| || ||||||||||| ||| |||||||| Sbjct: 5061 gataggttaattcacataaacaacacccagtagagacgggtatcatggaaacttgaaaat 5002 Query: 84 tcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccca 143 || ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 5001 tcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccca 4942 Query: 144 ggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctactt 203 | ||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 4941 gctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctactt 4882 Query: 204 tactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatgat 261 ||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| || Sbjct: 4881 tactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaacat 4822 Query: 262 acaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggctg 320 ||||||||||||||||||||||||||||| | ||||||||||||||| | |||||||| Sbjct: 4821 acaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggctg 4762 Query: 321 gaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtggg 380 || |||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 4761 gatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtggg 4702 Query: 381 acctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| ||||| Sbjct: 4701 gcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgctg 4642 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 4479 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 4420 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4419 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 4370 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4274 ttccttctggagaactttattctcctcctgcagtgacctctcct 4231
>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene, complete cds Length = 12335 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 12232 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12173 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 12172 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 12113 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12112 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 12053 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12052 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 11993 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 11992 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 11933 Query: 436 tgctg 440 ||||| Sbjct: 11932 tgctg 11928 Score = 172 bits (87), Expect = 8e-40 Identities = 102/107 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11763 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 11704 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 11703 tgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctc 11657 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11560 ttccttctggagaactttattctcctcctgcagtgacctctcct 11517 Score = 83.8 bits (42), Expect = 6e-13 Identities = 82/94 (87%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaaca-cccaggagcaacgggtatcatcaaaagttgaaaa 82 |||||||||||||||| |||||||| |||| || ||||||||||| ||| ||||||| Sbjct: 12331 gataggttaattcacataaacaacatcccactagagacgggtatcatggaaacttgaaaa 12272 Query: 83 ttcgtcactcatgctacatataaattacatggta 116 ||| ||||||| |||||||||| ||||||||||| Sbjct: 12271 ttcatcactcaagctacatatagattacatggta 12238
>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds Length = 12224 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 12121 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12062 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 12061 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 12002 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12001 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 11942 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 11941 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 11882 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 11881 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 11822 Query: 436 tgctg 440 ||||| Sbjct: 11821 tgctg 11817 Score = 172 bits (87), Expect = 8e-40 Identities = 102/107 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11652 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 11593 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 11592 tgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctc 11546 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11449 ttccttctggagaactttattctcctcctgcagtgacctctcct 11406 Score = 83.8 bits (42), Expect = 6e-13 Identities = 82/94 (87%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaaca-cccaggagcaacgggtatcatcaaaagttgaaaa 82 |||||||||||||||| |||||||| |||| || ||||||||||| ||| ||||||| Sbjct: 12220 gataggttaattcacataaacaacatcccactagagacgggtatcatggaaacttgaaaa 12161 Query: 83 ttcgtcactcatgctacatataaattacatggta 116 ||| ||||||| |||||||||| ||||||||||| Sbjct: 12160 ttcatcactcaagctacatatagattacatggta 12127
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 12979 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 12920 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12919 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 12860 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 12859 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 12800 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 12799 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 12740 Query: 436 tgctg 440 ||||| Sbjct: 12739 tgctg 12735 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 446 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 505 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 12562 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 12503 Query: 506 agtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||| |||||||| |||||||||||||||||||||||||| Sbjct: 12502 agtctgatcttgttgcgccgcctgggccttctgcttctc 12464 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12367 ttccttctggagaactttattctcctcctgcagtgacctctcct 12324 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||| | ||||||||||| ||| |||||||| Sbjct: 13137 gataggttaattcacataaacaacacccgctcgagacgggtatcatggaaacttgaaaat 13078 Query: 84 tcgtcactcatgctacatataaattacatggta 116 || ||||||| |||||||||| ||||||||||| Sbjct: 13077 tcatcactcaagctacatatagattacatggta 13045
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 6195 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 6136 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 6135 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 6076 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 6075 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 6016 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 6015 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 5956 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 5955 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 5896 Query: 436 tgctg 440 ||||| Sbjct: 5895 tgctg 5891 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 446 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 505 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5718 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 5659 Query: 506 agtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||| |||||||| |||||||||||||||||||||||||| Sbjct: 5658 agtctgatcttgttgcgccgcctgggccttctgcttctc 5620 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5523 ttccttctggagaactttattctcctcctgcagtgacctctcct 5480 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||| | ||||||||||| ||| |||||||| Sbjct: 6293 gataggttaattcacataaacaacacccgctcgagacgggtatcatggaaacttgaaaat 6234 Query: 84 tcgtcactcatgctacatataaattacatggta 116 || ||||||| |||||||||| ||||||||||| Sbjct: 6233 tcatcactcaagctacatatagattacatggta 6201
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 12979 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 12920 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12919 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 12860 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 12859 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 12800 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 12799 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 12740 Query: 436 tgctg 440 ||||| Sbjct: 12739 tgctg 12735 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 446 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 505 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 12562 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 12503 Query: 506 agtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||| |||||||| |||||||||||||||||||||||||| Sbjct: 12502 agtctgatcttgttgcgccgcctgggccttctgcttctc 12464 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12367 ttccttctggagaactttattctcctcctgcagtgacctctcct 12324 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaacacccaggagcaacgggtatcatcaaaagttgaaaat 83 |||||||||||||||| ||||||||||| | ||||||||||| ||| |||||||| Sbjct: 13137 gataggttaattcacataaacaacacccgctcgagacgggtatcatggaaacttgaaaat 13078 Query: 84 tcgtcactcatgctacatataaattacatggta 116 || ||||||| |||||||||| ||||||||||| Sbjct: 13077 tcatcactcaagctacatatagattacatggta 13045
>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene, complete cds Length = 8100 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 138 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 197 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 7997 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 7938 Query: 198 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 256 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 7937 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 7878 Query: 257 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 315 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 7877 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 7818 Query: 316 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 375 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 7817 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 7758 Query: 376 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 435 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 7757 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 7698 Query: 436 tgctg 440 ||||| Sbjct: 7697 tgctg 7693 Score = 172 bits (87), Expect = 8e-40 Identities = 102/107 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7528 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 7469 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 7468 tgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctc 7422 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7325 ttccttctggagaactttattctcctcctgcagtgacctctcct 7282 Score = 83.8 bits (42), Expect = 6e-13 Identities = 82/94 (87%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 24 gataggttaattcacagaaacaaca-cccaggagcaacgggtatcatcaaaagttgaaaa 82 |||||||||||||||| |||||||| |||| || ||||||||||| ||| ||||||| Sbjct: 8096 gataggttaattcacataaacaacatcccactagagacgggtatcatggaaacttgaaaa 8037 Query: 83 ttcgtcactcatgctacatataaattacatggta 116 ||| ||||||| |||||||||| ||||||||||| Sbjct: 8036 ttcatcactcaagctacatatagattacatggta 8003
>gb|AY466448.1| Triticum turgidum subsp. durum clone BAC 1256C17 VRN-A1 gene, partial cds Length = 959 Score = 178 bits (90), Expect = 1e-41 Identities = 105/110 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 685 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 626 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 625 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 576 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 333 ccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgc 392 |||||||||||||||||||||||| |||||||| |||||||| ||||| |||| |||||| Sbjct: 955 ccgttgatgtggctcaccatccacggtggaagccccgtccggggtggggcctgcggctgc 896 Query: 393 actgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||||| ||||||||||||||||||||| |||||||| ||| ||||| Sbjct: 895 actgccgcatcctctgccctctcgcctgttgccgctggatgaatgctg 848 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 ttccttctggagaactttattctcctcctgcagtgacctctcct 437
>gb|AY466446.1| Aegilops tauschii clone BAC 22J2 VRN-D1 gene, partial cds Length = 957 Score = 172 bits (87), Expect = 8e-40 Identities = 102/107 (95%) Strand = Plus / Minus Query: 438 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 497 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 681 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 622 Query: 498 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 621 tgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctc 575 Score = 159 bits (80), Expect = 1e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 329 tcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgagg 388 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| || Sbjct: 957 tcagccgttgatgtggctcaccatccacagtggaagccccgtccggggtggggcctgcgg 898 Query: 389 ctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||||||||| ||||| ||||||||||||||||||||||||| ||| ||||| Sbjct: 897 ctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaatgctg 846 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ttccttctggagaactttattctcctcctgcagtgacctctcct 435
>gb|AY466447.1| Triticum turgidum subsp. durum clone BAC 1225D16 VRN-B1 gene, partial cds Length = 965 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 446 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 505 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 681 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 622 Query: 506 agtttgatcttgctgcgccgcctgggccttctgcttctc 544 ||| |||||||| |||||||||||||||||||||||||| Sbjct: 621 agtctgatcttgttgcgccgcctgggccttctgcttctc 583 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 329 tcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgagg 388 |||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||| || Sbjct: 965 tcagccgttgatgtggctaaccatccacagtggaagccccgtccggggtggggcctgcgg 906 Query: 389 ctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 440 |||||||||| |||||||||||||||| |||| |||||||| ||| ||||| Sbjct: 905 ctgcactgccgcatcctctgccctctctcctgatgccgctggatgaatgctg 854 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 ttccttctggagaactttattctcctcctgcagtgacctctcct 443
>gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds Length = 1284 Score = 113 bits (57), Expect = 7e-22 Identities = 128/152 (84%), Gaps = 6/152 (3%) Strand = Plus / Minus Query: 453 gggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttga 512 |||| ||| |||| |||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 780 ggggtagcttcccccatcataaaggaggaggaggaagagctggtttggggctgagtttgc 721 Query: 513 tcttgctgcgc------cgcctgggccttctgcttctccacaagttccttctggagaact 566 || |||||| || ||||||||||||||||| | |||||||||||||||| | Sbjct: 720 tcccactgcgcttgctgcgtgtgggccttctgcttctctatgagttccttctggagaatt 661 Query: 567 ttattctcctcctgcagtgacctctccttctt 598 |||||||||||||||||||||||||||||||| Sbjct: 660 ttattctcctcctgcagtgacctctccttctt 629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 86/104 (82%), Gaps = 5/104 (4%) Strand = Plus / Minus Query: 272 ggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctggaag--ccctt 329 |||||||||| || | ||| ||||||||||| |||| ||| |||| |||||| ||||| Sbjct: 960 ggccggtgcagctcgctacacgtactgaataatacgtttagatggagtggaaggcccctt 901 Query: 330 cagcc---gttgatgtggctcaccatccacagtggaagcgccgt 370 ||||| ||||||||| ||||||||||| |||||||| |||| Sbjct: 900 cagccattgttgatgtgactcaccatccatggtggaagcaccgt 857 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaaca 45 ||||||||| || |||||||| ||||| |||||||||||||||| Sbjct: 1220 caatatacataatactcatattggatagtttaattcacagaaaca 1176
>gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MADS1) mRNA, complete cds Length = 1207 Score = 105 bits (53), Expect = 2e-19 Identities = 127/152 (83%), Gaps = 6/152 (3%) Strand = Plus / Minus Query: 453 gggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttga 512 |||| ||| |||| |||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 756 ggggtagcttcccccatcataaaggaggaggaggaagagctggtttggggctgagtttgc 697 Query: 513 tcttgctgcgc------cgcctgggccttctgcttctccacaagttccttctggagaact 566 || |||||| || ||||||||||||||||| | |||||||||||||||| | Sbjct: 696 tccaactgcgcttgctgcgtgtgggccttctgcttctctatgagttccttctggagaatt 637 Query: 567 ttattctcctcctgcagtgacctctccttctt 598 ||||||||||| |||||||||||||||||||| Sbjct: 636 ttattctcctcttgcagtgacctctccttctt 605 Score = 46.1 bits (23), Expect = 0.13 Identities = 85/104 (81%), Gaps = 5/104 (4%) Strand = Plus / Minus Query: 272 ggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctggaag--ccctt 329 |||||||||| || | ||| ||||||||||| |||| ||| |||| |||||| ||||| Sbjct: 936 ggccggtgcagctcgctacacgtactgaataatacgtttagatggagtggaaggaccctt 877 Query: 330 cagcc---gttgatgtggctcaccatccacagtggaagcgccgt 370 ||||| ||||| ||| ||||||||||| |||||||| |||| Sbjct: 876 cagccattgttgaggtgactcaccatccatggtggaagcaccgt 833 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 1 caatatacacaacgctcatattcgataggttaattcacagaaaca 45 ||||||||| || || ||||| ||||| |||||||||||||||| Sbjct: 1185 caatatacataatactgatattggatagtttaattcacagaaaca 1141
>gb|L46400.1|MZEMADSD Zea mays MADS-box protein (ZAP1) mRNA, complete cds Length = 1345 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 530 ggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacct 589 |||||||||| ||||| ||||||||||||| ||| | || |||||||||||||||||||| Sbjct: 682 ggccttctgcctctccgcaagttccttctgcagagccttgttctcctcctgcagtgacct 623 Query: 590 ctccttcttc 599 |||||||||| Sbjct: 622 ctccttcttc 613
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial cds Length = 1186 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 531 gccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctc 590 ||||||||| ||||| ||||||||||||| ||| | || ||||||||||||||||||||| Sbjct: 523 gccttctgcctctccgcaagttccttctgtagagccttgttctcctcctgcagtgacctc 464 Query: 591 tccttcttc 599 ||||||||| Sbjct: 463 tccttcttc 455
>gb|AY244509.1| Triticum monococcum cultivar G2528 MADS-box transcriptional factor (AP1) gene, partial cds Length = 666 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 ttccttctggagaactttattctcctcctgcagtgacctctcct 481 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 501 ggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 666 ggctgagtctgatcttgttgcgccgcatgggccttctgcttctccac 620
>gb|AY244508.1| Triticum monococcum cultivar G1777 MADS-box transcriptional factor (AP1) gene, partial cds Length = 667 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 ttccttctggagaactttattctcctcctgcagtgacctctcct 481 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 501 ggctgagtttgatcttgctgcgccgcctgggccttctgcttctccac 547 |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 667 ggctgagtctgatcttgttgcgccgcatgggccttctgcttctccac 621
>gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2) mRNA, complete cds Length = 735 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 536 ctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcctt 595 |||||||||||| ||||||||||| ||||| || |||||||||||||||||| ||||||| Sbjct: 528 ctgcttctccacgagttccttctgcagaaccttgttctcctcctgcagtgacttctcctt 469 Query: 596 ctt 598 ||| Sbjct: 468 ctt 466 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 457 gagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttg 511 |||| ||||||||||||||||| || ||||| || || ||||| ||||||||||| Sbjct: 613 gagcttccctcatcatgaaggacgaggaagaggaactagtttgcggctgagtttg 559 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 ||||||||||||||||||||||||| Sbjct: 733 agccgttgatgtggctcaccatcca 709
>gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1) mRNA, complete cds Length = 735 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 536 ctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcctt 595 |||||||||||| ||||||||||| ||||| || |||||||||||||||||| ||||||| Sbjct: 528 ctgcttctccacgagttccttctgcagaaccttgttctcctcctgcagtgacttctcctt 469 Query: 596 ctt 598 ||| Sbjct: 468 ctt 466 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 457 gagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttg 511 |||| ||||||||||||||||| || ||||| || || ||||| ||||||||||| Sbjct: 613 gagcttccctcatcatgaaggacgaggaagaggaactagtttgcggctgagtttg 559 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 ||||||||||||||||||||||||| Sbjct: 733 agccgttgatgtggctcaccatcca 709
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene) Length = 1203 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 531 gccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctc 590 ||||||||| ||||||| ||||||||||| || | || ||||||||||||||||||||| Sbjct: 575 gccttctgcctctccaccagttccttctgtagggccttgttctcctcctgcagtgacctc 516 Query: 591 tccttcttc 599 ||||||||| Sbjct: 515 tccttcttc 507
>ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 533 cttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctc 592 ||||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 531 cttctgcctctccaccagttccttctgcagagccttgttctcctcctgcagtgacctctc 472 Query: 593 ctt 595 ||| Sbjct: 471 ctt 469
>gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS215 mRNA, complete cds Length = 1136 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 533 cttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctc 592 ||||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 698 cttctgcctctccaccagttccttctgcagagccttgttctcctcctgcagtgacctctc 639 Query: 593 ctt 595 ||| Sbjct: 638 ctt 636
>gb|AF345911.1|AF345911 Oryza sativa MADS-box protein FDRMADS3 mRNA, complete cds Length = 1347 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 533 cttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctc 592 ||||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 655 cttctgcctctccaccagttccttctgcagagccttgttctcctcctgcagtgacctctc 596 Query: 593 ctt 595 ||| Sbjct: 595 ctt 593
>gb|AF058698.1|AF058698 Oryza sativa MADS15 protein mRNA, complete cds Length = 1285 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 533 cttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctc 592 ||||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 649 cttctgcctctccaccagttccttctgcagagccttgttctcctcctgcagtgacctctc 590 Query: 593 ctt 595 ||| Sbjct: 589 ctt 587
>dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K24, full insert sequence Length = 2563 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 533 cttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctc 592 ||||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 2047 cttctgcctctccaccagttccttctgcagagccttgttctcctcctgcagtgacctctc 1988 Query: 593 ctt 595 ||| Sbjct: 1987 ctt 1985
>dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like protein, complete cds, clone:E31864 Length = 1289 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 533 cttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctc 592 ||||||| ||||||| ||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 655 cttctgcctctccaccagttccttctgcagagccttgttctcctcctgcagtgacctctc 596 Query: 593 ctt 595 ||| Sbjct: 595 ctt 593
>gb|AF112150.1|AF112150 Zea mays MADS box protein 3 (mads3) mRNA, complete cds Length = 1250 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 531 gccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctc 590 ||||||||| |||| |||||||||||| |||| || ||||||||||||||||||||| Sbjct: 602 gccttctgcctctctgaaagttccttctgtagaatcttgttctcctcctgcagtgacctc 543 Query: 591 tccttcttc 599 ||||||||| Sbjct: 542 tccttcttc 534 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 464 cctcatcatgaaggaagaagaagaagagct 493 ||||||||||||||||||||| || ||||| Sbjct: 702 cctcatcatgaaggaagaagacgatgagct 673
>gb|AY198327.1| Lolium perenne MADS2 mRNA, complete cds Length = 1083 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 531 gccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctc 590 ||||||||| ||||||| ||||||||||| ||| | || ||||||||||| ||||||| | Sbjct: 615 gccttctgcctctccaccagttccttctgtagagccttgttctcctcctggagtgaccgc 556 Query: 591 tccttcttc 599 ||||||||| Sbjct: 555 tccttcttc 547 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 461 atccctcatcatgaaggaagaagaagaagagct 493 |||||||||||||||||| ||||| || ||||| Sbjct: 727 atccctcatcatgaaggaggaagatgatgagct 695
>gb|AY109034.1| Zea mays PCO141183 mRNA sequence Length = 659 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 531 gccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctc 590 ||||||||| |||| |||||||||||| ||| | || ||||||||||||||||||||| Sbjct: 153 gccttctgcctctctgaaagttccttctgtagagccttgttctcctcctgcagtgacctc 94 Query: 591 tccttcttc 599 ||||||||| Sbjct: 93 tccttcttc 85 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 464 cctcatcatgaaggaagaagaagaagagct 493 ||||||||||||||||||||| || ||||| Sbjct: 253 cctcatcatgaaggaagaagacgatgagct 224
>gb|AF035379.1|AF035379 Lolium temulentum MADS-box protein 2 (MADS2) mRNA, alternatively spliced product, complete cds Length = 1062 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 531 gccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctc 590 ||||||||| ||||||| ||||||||||| ||| | || ||||||||||| ||||||| | Sbjct: 614 gccttctgcctctccaccagttccttctgtagagccttgttctcctcctggagtgaccgc 555 Query: 591 tccttcttc 599 ||||||||| Sbjct: 554 tccttcttc 546 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 461 atccctcatcatgaaggaagaagaagaagagct 493 |||||||||||||||||| ||||| || ||||| Sbjct: 726 atccctcatcatgaaggaggaagatgatgagct 694
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10) mRNA, complete cds Length = 964 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 534 ttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcc 593 |||||||||||||| ||||| ||||| || || ||||||||||||||||||||| | ||| Sbjct: 618 ttctgcttctccaccagttctttctgtaggaccttattctcctcctgcagtgacttttcc 559 Query: 594 ttc 596 ||| Sbjct: 558 ttc 556 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 827 agccgttgatgtggctcagcatcca 803
>emb|AJ430641.1|ZMA430641 Zea mays mRNA for putative MADS-domain transcription factor (m4 gene) Length = 1280 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 534 ttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcc 593 |||||||||||| | || |||||||| ||||| || |||||||||||||||||| ||||| Sbjct: 830 ttctgcttctccgcgagctccttctgcagaaccttgttctcctcctgcagtgacttctcc 771 Query: 594 ttc 596 ||| Sbjct: 770 ttc 768
>gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds Length = 1101 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 534 ttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcc 593 |||||||||||||| ||||| ||||| || || ||||||||||||||||||||| | ||| Sbjct: 545 ttctgcttctccaccagttctttctgtaggaccttattctcctcctgcagtgacttttcc 486 Query: 594 ttc 596 ||| Sbjct: 485 ttc 483 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 754 agccgttgatgtggctcagcatcca 730
>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds Length = 1373 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 534 ttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcc 593 |||||||||||||| ||||| ||||| || || ||||||||||||||||||||| | ||| Sbjct: 817 ttctgcttctccaccagttctttctgtaggaccttattctcctcctgcagtgacttttcc 758 Query: 594 ttc 596 ||| Sbjct: 757 ttc 755 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 1026 agccgttgatgtggctcagcatcca 1002
>dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box protein, complete cds Length = 1124 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 534 ttctgcttctccacaagttccttctggagaactttattctcctcctgcagtgacctctcc 593 |||||||||||||| ||||| ||||| || || ||||||||||||||||||||| | ||| Sbjct: 535 ttctgcttctccaccagttctttctgtaggaccttattctcctcctgcagtgacttttcc 476 Query: 594 ttc 596 ||| Sbjct: 475 ttc 473 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 744 agccgttgatgtggctcagcatcca 720
>emb|AJ430632.1|ZMA430632 Zea mays mRNA for putative MADS-domain transcription factor (m15 gene) Length = 1216 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 527 ctgggccttctgcttctccacaagttccttctggagaactttattctcctcctgcagtga 586 |||||| |||||||||||| | || |||||||| ||||| || |||||||||||||| || Sbjct: 833 ctgggctttctgcttctccgcgagctccttctgcagaaccttgttctcctcctgcagcga 774 Query: 587 cctctccttc 596 | |||||||| Sbjct: 773 cttctccttc 764
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 ||||||||| ||| | || ||||||||||||||||||||||||| Sbjct: 471552 ttccttctgcagagccttgttctcctcctgcagtgacctctcct 471595
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 ||||||||| ||| | || ||||||||||||||||||||||||| Sbjct: 73716 ttccttctgcagagccttgttctcctcctgcagtgacctctcct 73759
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 551 ttccttctggagaactttattctcctcctgcagtgacctctcct 594 ||||||||| ||| | || ||||||||||||||||||||||||| Sbjct: 25464 ttccttctgcagagccttgttctcctcctgcagtgacctctcct 25507
>ref|NM_112470.2| Arabidopsis thaliana MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1) AT3G16000 (MFP1) mRNA, complete cds Length = 2537 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 541 tctccacaagttccttctggag 562 |||||||||||||||||||||| Sbjct: 1846 tctccacaagttccttctggag 1825
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 567 ttattctcctcctgcagtgacctctccttc 596 ||||||||||||||||||||| | |||||| Sbjct: 520 ttattctcctcctgcagtgacttttccttc 491 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 783 agccgttgatgtggctcagcatcca 759
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 gaaggaagaagaagaagagctg 494 |||||||||||||||||||||| Sbjct: 96796 gaaggaagaagaagaagagctg 96817
>gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, complete sequence Length = 117340 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 actctgatttcttttcctctcc 226 |||||||||||||||||||||| Sbjct: 26709 actctgatttcttttcctctcc 26730
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211 mRNA, complete cds Length = 1109 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 567 ttattctcctcctgcagtgacctctccttc 596 ||||||||||||||||||||| | |||||| Sbjct: 598 ttattctcctcctgcagtgacttttccttc 569 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 861 agccgttgatgtggctcagcatcca 837
>emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chromosome 9 Contains the OBP2A gene for odorant-binding protein 2A, the LCN1 gene for lipocalin 1, the MRPS2 gene for mitochondrial ribosomal protein S2, gene MGC29761, a novel gene, gene KIAA0649, a novel gene, a novel gene, a suppressor of cytokine signaling 5 (SOCS5) pseudogene and two CpG islands, complete sequence Length = 153231 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 ttttcctctcccctccatgggg 237 |||||||||||||||||||||| Sbjct: 51042 ttttcctctcccctccatgggg 51021
>gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, complete sequence Length = 153518 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 actctgatttcttttcctctcc 226 |||||||||||||||||||||| Sbjct: 56837 actctgatttcttttcctctcc 56816
>gb|AY059753.1| Arabidopsis thaliana At3g16000 mRNA sequence Length = 2561 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 541 tctccacaagttccttctggag 562 |||||||||||||||||||||| Sbjct: 1885 tctccacaagttccttctggag 1864
>gb|BT008690.1| Arabidopsis thaliana clone RAFL09-77-G13 (R19601) putative myosin heavy chain (At3g16000) mRNA, complete cds Length = 2521 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 541 tctccacaagttccttctggag 562 |||||||||||||||||||||| Sbjct: 1848 tctccacaagttccttctggag 1827
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1 Length = 79355 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 541 tctccacaagttccttctggag 562 |||||||||||||||||||||| Sbjct: 23799 tctccacaagttccttctggag 23820
>emb|AJ496575.1|HVU496575 Hordeum vulgare mRNA for putative CENP-E like kinetochore protein (cpel1 gene) Length = 2241 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 534 ttctgcttctccacaagttcct 555 |||||||||||||||||||||| Sbjct: 1739 ttctgcttctccacaagttcct 1718
>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full insert sequence Length = 1284 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 567 ttattctcctcctgcagtgacctctccttc 596 ||||||||||||||||||||| | |||||| Sbjct: 804 ttattctcctcctgcagtgacttttccttc 775
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 tcttttcctctcccctccatg 234 ||||||||||||||||||||| Sbjct: 139234 tcttttcctctcccctccatg 139214
>gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, complete sequence Length = 163749 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 gaagaagaagaagagctggtttgag 501 ||||||||||||||| ||||||||| Sbjct: 76804 gaagaagaagaagagttggtttgag 76780
>gb|AC108852.9| Mus musculus chromosome 3, clone RP24-87H3, complete sequence Length = 220174 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaagag 491 ||||||||||||||||||||| Sbjct: 41848 atgaaggaagaagaagaagag 41828
>gb|AC100381.9| Mus musculus chromosome 3, clone RP23-132C6, complete sequence Length = 190741 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaagag 491 ||||||||||||||||||||| Sbjct: 107493 atgaaggaagaagaagaagag 107473
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 64162 agccgttgatgtggctcagcatcca 64138 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttattctcctcctgcagtgac 587 ||||||||||||||||||||| Sbjct: 63326 ttattctcctcctgcagtgac 63306
>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence Length = 205920 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catgaaggaagaagaagaaga 490 ||||||||||||||||||||| Sbjct: 79753 catgaaggaagaagaagaaga 79733
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 ttattctcctcctgcagtgac 587 ||||||||||||||||||||| Sbjct: 30740457 ttattctcctcctgcagtgac 30740477 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 30739621 agccgttgatgtggctcagcatcca 30739645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 122642 atgaaggaagaagaagaaga 122661
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 22769 agccgttgatgtggctcagcatcca 22745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 ttattctcctcctgcagtgac 587 ||||||||||||||||||||| Sbjct: 21933 ttattctcctcctgcagtgac 21913
>gb|AC140222.3| Mus musculus BAC clone RP24-330A7 from chromosome 9, complete sequence Length = 145102 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 catgaaggaagaagaagaaga 490 ||||||||||||||||||||| Sbjct: 64591 catgaaggaagaagaagaaga 64611
>gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete sequence Length = 130660 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catgaaggaagaagaagaaga 490 ||||||||||||||||||||| Sbjct: 75424 catgaaggaagaagaagaaga 75404
>emb|AL512663.4| Human DNA sequence from clone RP11-356H7 on chromosome 1, complete sequence Length = 75171 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 acatataaattacatggtaga 118 ||||||||||||||||||||| Sbjct: 24219 acatataaattacatggtaga 24199
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 ttattctcctcctgcagtgac 587 ||||||||||||||||||||| Sbjct: 49158 ttattctcctcctgcagtgac 49178 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 48322 agccgttgatgtggctcagcatcca 48346
>dbj|AK084359.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230030M07 product:unclassifiable, full insert sequence Length = 892 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaagag 491 ||||||||||||||||||||| Sbjct: 547 atgaaggaagaagaagaagag 567
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcttttcctctcccctccatg 234 ||||||||||||||||||||| Sbjct: 164000 tcttttcctctcccctccatg 164020
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 567 ttattctcctcctgcagtgac 587 ||||||||||||||||||||| Sbjct: 30831881 ttattctcctcctgcagtgac 30831901 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 331 agccgttgatgtggctcaccatcca 355 |||||||||||||||||| |||||| Sbjct: 30831045 agccgttgatgtggctcagcatcca 30831069 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 122642 atgaaggaagaagaagaaga 122661
>gb|AC084564.1|CBRG36H10 Caenorhabditis briggsae cosmid G36H10, complete sequence Length = 44789 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 catgaaggaagaagaagaaga 490 ||||||||||||||||||||| Sbjct: 32112 catgaaggaagaagaagaaga 32132
>gb|AF508306.1| Vibrio harveyi zinc metalloprotease Pap6 gene, complete cds Length = 2034 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 gccgcctgggccttctgcttc 542 ||||||||||||||||||||| Sbjct: 594 gccgcctgggccttctgcttc 574
>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence Length = 168738 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 ggacctgaggctgcactgcca 399 ||||||||||||||||||||| Sbjct: 55164 ggacctgaggctgcactgcca 55184
>dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-236L10, complete sequence Length = 167639 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catgaaggaagaagaagaaga 490 ||||||||||||||||||||| Sbjct: 160750 catgaaggaagaagaagaaga 160730
>emb|AL928583.10| Mouse DNA sequence from clone RP23-287C12 on chromosome 2, complete sequence Length = 118230 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catgaaggaagaagaagaaga 490 ||||||||||||||||||||| Sbjct: 46956 catgaaggaagaagaagaaga 46936
>gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 196838 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 tcttttcctctcccctccatg 234 ||||||||||||||||||||| Sbjct: 192924 tcttttcctctcccctccatg 192904
>ref|NM_118751.2| Arabidopsis thaliana binding / transporter AT4G26180 mRNA, complete cds Length = 1126 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 54 atgaaggaagaagaagaaga 35
>ref|NM_124668.2| Arabidopsis thaliana unknown protein AT5G52900 mRNA, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 265 atgaaggaagaagaagaaga 246
>ref|NM_111151.3| Arabidopsis thaliana ZFN1 (ZINC FINGER PROTEIN 1); nucleic acid binding AT3G02830 (ZFN1) mRNA, complete cds Length = 1658 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 aaggaagaagaagaagagct 493 |||||||||||||||||||| Sbjct: 1438 aaggaagaagaagaagagct 1457
>ref|XM_521057.1| PREDICTED: Pan troglodytes similar to L-type calcium channel alpha-1 subunit (LOC465629), mRNA Length = 3511 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 cactgccacatcctctgccctctc 415 ||||||| |||||||||||||||| Sbjct: 158 cactgccccatcctctgccctctc 181
>gb|AF196779.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 176767 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cactgccacatcctctgccctctc 415 ||||||| |||||||||||||||| Sbjct: 172530 cactgccccatcctctgccctctc 172507
>gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 140335 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cactgccacatcctctgccctctc 415 ||||||| |||||||||||||||| Sbjct: 17800 cactgccccatcctctgccctctc 17777
>ref|XM_864132.1| PREDICTED: Bos taurus similar to CG7523-PA (LOC613396), partial mRNA Length = 2073 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 ctgcttctccacaagttcct 555 |||||||||||||||||||| Sbjct: 275 ctgcttctccacaagttcct 256
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cactgccacatcctctgccctctc 415 ||||||| |||||||||||||||| Sbjct: 145722 cactgccccatcctctgccctctc 145699
>gb|AC144651.2| Mus musculus BAC clone RP24-251O18 from chromosome Y, complete sequence Length = 144831 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 18002 atgaaggaagaagaagaaga 18021
>gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chromosome 4, complete sequence Length = 171121 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 159854 tttcttttcctctcccctcc 159873 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 49290 tttcttttcctctcccctcc 49309
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 81520 tttcttttcctctcccctcc 81501
>gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's Hospital Oakland Research Institute) complete sequence Length = 216036 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcatgctacatataaattac 110 |||||||||||||||||||| Sbjct: 160116 tcatgctacatataaattac 160097
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 48992 atgaaggaagaagaagaaga 48973
>ref|XM_843231.1| PREDICTED: Canis familiaris similar to guanine nucleotide binding protein-like 1, transcript variant 2 (LOC474825), mRNA Length = 2166 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 aggaagaagaagaagagctg 494 |||||||||||||||||||| Sbjct: 1897 aggaagaagaagaagagctg 1916
>ref|XM_532055.2| PREDICTED: Canis familiaris similar to guanine nucleotide binding protein-like 1, transcript variant 1 (LOC474825), mRNA Length = 2030 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 aggaagaagaagaagagctg 494 |||||||||||||||||||| Sbjct: 1761 aggaagaagaagaagagctg 1780
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence Length = 100559 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 aaggaagaagaagaagagct 493 |||||||||||||||||||| Sbjct: 70387 aaggaagaagaagaagagct 70368
>gb|AC118038.15| Mus musculus chromosome 15, clone RP23-87G17, complete sequence Length = 209907 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 139660 atgaaggaagaagaagaaga 139641
>ref|XM_809538.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509237.40) partial mRNA Length = 735 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 aggaagaagaagaagagctg 494 |||||||||||||||||||| Sbjct: 275 aggaagaagaagaagagctg 294
>gb|AC125109.3| Mus musculus BAC clone RP24-232H5 from chromosome 3, complete sequence Length = 165361 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcttttcctctcccctccat 233 |||||||||||||||||||| Sbjct: 142292 tcttttcctctcccctccat 142273
>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete sequence Length = 181200 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 115317 tttcttttcctctcccctcc 115298
>gb|AC145983.2| Pan troglodytes BAC clone RP43-17E6 from 7, complete sequence Length = 167523 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 atcaaaagttgaaaattcgt 87 |||||||||||||||||||| Sbjct: 128029 atcaaaagttgaaaattcgt 128048
>gb|AC004856.1| Homo sapiens PAC clone RP4-676L20 from 7, complete sequence Length = 91748 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 atcaaaagttgaaaattcgt 87 |||||||||||||||||||| Sbjct: 72403 atcaaaagttgaaaattcgt 72384
>gb|AC144538.23| Medicago truncatula clone mth2-31l21, complete sequence Length = 135050 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 87099 atgaaggaagaagaagaaga 87080
>gb|AC135100.12| Medicago truncatula clone mth2-17j9, complete sequence Length = 113967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 84478 atgaaggaagaagaagaaga 84497
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 50715 atgaaggaagaagaagaaga 50696
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 gatttcttttcctctcccct 229 |||||||||||||||||||| Sbjct: 4111566 gatttcttttcctctcccct 4111547
>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the GJA5 gene for gap junction protein, alpha 5, 40kDa (connexin 40) protein, complete sequence Length = 114412 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ggaaaggaaactgaggtgga 166 |||||||||||||||||||| Sbjct: 43104 ggaaaggaaactgaggtgga 43085
>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a cytochrome c oxidase subunit IV pseudogene, a novel gene, an aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene, a novel gene, similar to RIKEN cDNA 1700086N05 and CpG island, complete sequence Length = 112107 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tctgatttcttttcctctcc 226 |||||||||||||||||||| Sbjct: 46525 tctgatttcttttcctctcc 46544
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 26861 atgaaggaagaagaagaaga 26842
>ref|XM_780940.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 4, sodium bicarbonate transporter-like, member 10 (LOC580912), mRNA Length = 6480 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 catcatgaaggaagaagaagaaga 490 |||||| ||||||||||||||||| Sbjct: 1778 catcatcaaggaagaagaagaaga 1801
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 30117 atgaaggaagaagaagaaga 30136
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 150445 atgaaggaagaagaagaaga 150464
>emb|AL049483.1|ATF20B18 Arabidopsis thaliana DNA chromosome 4, BAC clone F20B18 (ESSA project) Length = 104738 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 99760 atgaaggaagaagaagaaga 99779
>emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, BAC clone (ESSA project) Length = 89904 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 6092 atgaaggaagaagaagaaga 6111
>emb|AJ006216.1|HSA6216 Homo sapiens CACNA1F gene, exons 1 to 48 Length = 31501 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 cactgccacatcctctgccctctc 415 ||||||| |||||||||||||||| Sbjct: 25264 cactgccccatcctctgccctctc 25287
>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the 5' end of a novel gene, a novel gene (4933430M04Rik) and a pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), complete sequence Length = 181503 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ctactttactctgatttctt 217 |||||||||||||||||||| Sbjct: 84876 ctactttactctgatttctt 84895
>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence Length = 181494 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aggtggaaaggaaactgagg 162 |||||||||||||||||||| Sbjct: 131358 aggtggaaaggaaactgagg 131377
>gb|AC037487.12| Homo sapiens chromosome 17, clone RP11-583F2, complete sequence Length = 176807 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 1994 atgaaggaagaagaagaaga 1975
>gb|AC015821.9| Homo sapiens chromosome 17, clone RP11-160O5, complete sequence Length = 160184 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 90847 atgaaggaagaagaagaaga 90828
>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence Length = 210912 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 58360 tttcttttcctctcccctcc 58379
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 56642 atgaaggaagaagaagaaga 56661
>gb|AC182643.2| Pan troglodytes BAC clone CH251-219K6 from chromosome 4, complete sequence Length = 176400 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 102601 tttcttttcctctcccctcc 102582
>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete sequence Length = 89779 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 13763 atgaaggaagaagaagaaga 13744
>gb|AC093890.3| Homo sapiens BAC clone RP11-673E1 from 4, complete sequence Length = 171358 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 68545 tttcttttcctctcccctcc 68526
>gb|AC104090.3| Homo sapiens BAC clone RP11-780M14 from 4, complete sequence Length = 101033 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 94746 tttcttttcctctcccctcc 94727
>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence Length = 174066 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 catataaattacatggtagattac 122 |||||||| ||||||||||||||| Sbjct: 100712 catataaaatacatggtagattac 100735
>gb|AC010236.5| Homo sapiens chromosome 5 clone CTC-340D7, complete sequence Length = 121439 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 aggaagaagaagaagagctg 494 |||||||||||||||||||| Sbjct: 62816 aggaagaagaagaagagctg 62797
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 2576 atgaaggaagaagaagaaga 2557
>gb|BT006089.1| Arabidopsis thaliana clone U20957 unknown protein (At5g52900) mRNA, complete cds Length = 739 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 149 atgaaggaagaagaagaaga 130
>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence Length = 193896 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ttcttttcctctcccctcca 232 |||||||||||||||||||| Sbjct: 95990 ttcttttcctctcccctcca 95971
>gb|AC024567.6|AC024567 Homo sapiens chromosome 5 clone CTD-2161I13, complete sequence Length = 99338 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 aggaagaagaagaagagctg 494 |||||||||||||||||||| Sbjct: 14462 aggaagaagaagaagagctg 14443
>gb|AC155641.8| Mus musculus 10 BAC RP24-121N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195480 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 107816 atgaaggaagaagaagaaga 107797
>emb|BX822532.1|CNS0A63L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1549 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 aaggaagaagaagaagagct 493 |||||||||||||||||||| Sbjct: 1389 aaggaagaagaagaagagct 1408
>gb|AC016642.7| Homo sapiens chromosome 5 clone RP11-479O16, complete sequence Length = 160907 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 72978 atgaaggaagaagaagaaga 72959
>gb|BT005766.1| Arabidopsis thaliana clone RAFL15-29-O03 (R20957) unknown protein (At5g52900) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 240 atgaaggaagaagaagaaga 221
>gb|AC009180.9|AC009180 Homo sapiens chromosome 7 clone RP11-209G24, complete sequence Length = 163384 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 64139 atgaaggaagaagaagaaga 64158
>gb|AC084678.1|CBRG47M11 Caenorhabditis briggsae cosmid G47M11, complete sequence Length = 36601 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 5665 atgaaggaagaagaagaaga 5646
>gb|AC087645.19| Homo sapiens chromosome 17, clone RP11-219G17, complete sequence Length = 209751 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 135407 atgaaggaagaagaagaaga 135426
>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence Length = 107156 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aggtggaaaggaaactgagg 162 |||||||||||||||||||| Sbjct: 82688 aggtggaaaggaaactgagg 82669
>gb|AY085371.1| Arabidopsis thaliana clone 148254 mRNA, complete sequence Length = 1192 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 243 atgaaggaagaagaagaaga 224
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 139976 atgaaggaagaagaagaaga 139957
>dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC20 Length = 81575 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 58600 atgaaggaagaagaagaaga 58619
>dbj|AK117978.1| Arabidopsis thaliana At3g02830 mRNA for putative zinc finger protein 1 (zfn1), complete cds, clone: RAFL19-18-D10 Length = 1626 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 aaggaagaagaagaagagct 493 |||||||||||||||||||| Sbjct: 1406 aaggaagaagaagaagagct 1425
>dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFH8 Length = 62420 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 catgaaggaagaagaagaag 489 |||||||||||||||||||| Sbjct: 37804 catgaaggaagaagaagaag 37785
>emb|X16039.1|LLRBCS Larix laricina rbcS gene for ribulose-1,5-carboxylase/oxygenase (EC 4.1.1.39) Length = 3679 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 atcatgaaggaagaagaagaagag 491 ||||||| |||||||||||||||| Sbjct: 2439 atcatgatggaagaagaagaagag 2416
>dbj|AK062867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-B11, full insert sequence Length = 467 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 109 atgaaggaagaagaagaaga 90
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 tgaaggaagaagaagaagag 491 |||||||||||||||||||| Sbjct: 124737 tgaaggaagaagaagaagag 124718
>gb|AF138743.1|AF138743 Arabidopsis thaliana zinc finger protein 1 (zfn1) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 aaggaagaagaagaagagct 493 |||||||||||||||||||| Sbjct: 1202 aaggaagaagaagaagagct 1221
>gb|AC138528.8| Mus musculus chromosome 3, clone RP23-329L9, complete sequence Length = 188290 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 catccctcatcatgaaggaa 479 |||||||||||||||||||| Sbjct: 159395 catccctcatcatgaaggaa 159376
>gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complete sequence Length = 199904 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 atgaaggaagaagaagaaga 490 |||||||||||||||||||| Sbjct: 155803 atgaaggaagaagaagaaga 155822
>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence Length = 170634 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 122835 tttcttttcctctcccctcc 122854
>gb|U93305.1|HSU93305 Homo sapiens A4 differentiation-dependent protein (A4), triple LIM domain protein (LMO6), and synaptophysin (SYP) genes, complete cds; and calcium channel alpha-1 subunit (CACNA1F) gene, partial cds Length = 44147 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cactgccacatcctctgccctctc 415 ||||||| |||||||||||||||| Sbjct: 39909 cactgccccatcctctgccctctc 39886
>emb|AL805899.20| Mouse DNA sequence from clone RP23-400P11 on chromosome 4, complete sequence Length = 204367 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gaagaagaagaagagctggt 496 |||||||||||||||||||| Sbjct: 161063 gaagaagaagaagagctggt 161082
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tttcttttcctctcccctcc 231 |||||||||||||||||||| Sbjct: 93924 tttcttttcctctcccctcc 93943 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,820,510 Number of Sequences: 3902068 Number of extensions: 7820510 Number of successful extensions: 736666 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 734454 Number of HSP's gapped (non-prelim): 2177 length of query: 599 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 576 effective length of database: 17,143,297,704 effective search space: 9874539477504 effective search space used: 9874539477504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
