>gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase
           mRNA, 3' UTR and partial cds
          Length = 583

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                
Query: 106 tcttggtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
           ||||||||||| |||||||| || ||| |||||||||||||||||||||||||
Sbjct: 428 tcttggtactgctccatgaatgagtcgttgaacttcttgaagctcgacatgat 376



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 21  aacttcaattgctggtagaaaagagcagcattatat 56
           ||||| |||||||| ||||||| | |||||||||||
Sbjct: 511 aactttaattgctgctagaaaataacagcattatat 476

>gb|AY108756.1| Zea mays PCO087866 mRNA sequence
          Length = 1198

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 111 gtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
           |||||| ||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 875 gtactgttccatgaacgagtcgttgaacttcttgaagctcgacatgat 828

>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence
          Length = 1303

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 118 tccatgaacgantcggtgaacttcttgaagctcgacatgat 158
           |||||||| || ||| |||||||||||||||||||||||||
Sbjct: 199 tccatgaatgagtcgttgaacttcttgaagctcgacatgat 239

>emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 3/3
          Length = 315079

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 17     aatcaacttcaattgctggtagaaaa 42
              |||||||||||||| |||||||||||
Sbjct: 147420 aatcaacttcaattcctggtagaaaa 147395

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 111    gtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
              |||||| |||||||| |  ||| |||||||||||||||| | ||||||
Sbjct: 445640 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgat 445687



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 33       tggtagaaaagagcagcat 51
                |||||||||||||||||||
Sbjct: 27915400 tggtagaaaagagcagcat 27915382

>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA,
            complete cds
          Length = 1558

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 111  gtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
            |||||| |||||||| |  ||| |||||||||||||||| | ||||||
Sbjct: 1476 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgat 1429

>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 111   gtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
             |||||| |||||||| |  ||| |||||||||||||||| | ||||||
Sbjct: 47804 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgat 47851

>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full
            insert sequence
          Length = 1970

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 111  gtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
            |||||| |||||||| |  ||| |||||||||||||||| | ||||||
Sbjct: 1525 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgat 1478

>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full
            insert sequence
          Length = 1581

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 111  gtactggtccatgaacgantcggtgaacttcttgaagctcgacatgat 158
            |||||| |||||||| |  ||| |||||||||||||||| | ||||||
Sbjct: 1294 gtactgatccatgaaagtgtcgttgaacttcttgaagctggtcatgat 1247

>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete
              sequence
          Length = 1085720

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 141    cttgaagctcgacatgatt 159
              |||||||||||||||||||
Sbjct: 390720 cttgaagctcgacatgatt 390738

>gb|AC096551.1| Homo sapiens BAC clone RP11-22K23 from 7, complete sequence
          Length = 149656

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     agctcacagctaattaatc 20
             |||||||||||||||||||
Sbjct: 12427 agctcacagctaattaatc 12409

>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome
          Length = 359853

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     taattaatcaacttcaatt 30
              |||||||||||||||||||
Sbjct: 353479 taattaatcaacttcaatt 353461



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 12   taattaatcaacttcaatt 30
            |||||||||||||||||||
Sbjct: 6375 taattaatcaacttcaatt 6393

>ref|XM_567515.1| Cryptococcus neoformans var. neoformans JEC21 midasin (CNJ01380)
             partial mRNA
          Length = 14713

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 141   cttgaagctcgacatgatt 159
             |||||||||||||||||||
Sbjct: 14064 cttgaagctcgacatgatt 14046

>gb|AC131787.3| Mus musculus BAC clone RP24-397K14 from chromosome 18, complete sequence
          Length = 159775

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 39     aaaagagcagcattatatt 57
              |||||||||||||||||||
Sbjct: 117101 aaaagagcagcattatatt 117119

>ref|XM_799758.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503815.4) partial mRNA
          Length = 569

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 57  taatatgtagacgcggtgg 75
           |||||||||||||||||||
Sbjct: 331 taatatgtagacgcggtgg 313

>gb|AC122271.4| Mus musculus BAC clone RP23-222D3 from 18, complete sequence
          Length = 199493

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   aaaagagcagcattatatt 57
            |||||||||||||||||||
Sbjct: 1514 aaaagagcagcattatatt 1532

>ref|XM_765235.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_393_17539_16058) partial mRNA
          Length = 1482

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 18  atcaacttcaattgctggt 36
           |||||||||||||||||||
Sbjct: 248 atcaacttcaattgctggt 230

>gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, complete sequence
          Length = 223742

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     agctcacagctaattaatc 20
             |||||||||||||||||||
Sbjct: 47152 agctcacagctaattaatc 47134

>gb|AC113301.7| Mus musculus chromosome 8, clone RP23-430G7, complete sequence
          Length = 195985

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     acttcaattgctggtagaa 40
              |||||||||||||||||||
Sbjct: 183808 acttcaattgctggtagaa 183826

>emb|AL354936.21| Human DNA sequence from clone RP11-374A22 on chromosome 6 Contains a
             novel gene, the 5' end of the TCBA1 gene for T-cell
             lymphoma breakpoint associated target 1 and a CpG island,
             complete sequence
          Length = 161618

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    ttaatcaacttcaattgct 33
             |||||||||||||||||||
Sbjct: 48303 ttaatcaacttcaattgct 48285

>gb|AC144547.6| Homo sapiens 12 BAC RP13-653N12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 59051

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    aaaagagcagcattatatt 57
             |||||||||||||||||||
Sbjct: 56947 aaaagagcagcattatatt 56929

>gb|AC008129.21| Homo sapiens 12 BAC RP11-478H3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 77083

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 132   ggtgaacttcttgaagctc 150
             |||||||||||||||||||
Sbjct: 18862 ggtgaacttcttgaagctc 18844

>gb|AY780645.1| Lactobacillus reuteri CRL1098 cobalamin gene cluster, partial sequence
          Length = 43444

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    acttcaattgctggtagaaaaga 44
             |||||||||| ||||||||||||
Sbjct: 32294 acttcaattgatggtagaaaaga 32316

>gb|AC117517.7| Homo sapiens X BAC RP13-356M24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121628

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    taatcaacttcaattgctg 34
             |||||||||||||||||||
Sbjct: 56990 taatcaacttcaattgctg 56972

>gb|AC026426.3|AC026426 Homo sapiens chromosome 5 clone CTD-2188O13, complete sequence
          Length = 68480

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   attatattaatatgtagac 68
            |||||||||||||||||||
Sbjct: 3462 attatattaatatgtagac 3480

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    tggtagaaaagagcagcat 51
             |||||||||||||||||||
Sbjct: 78758 tggtagaaaagagcagcat 78740

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1343_D04
          Length = 143407

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 33   tggtagaaaagagcagcat 51
            |||||||||||||||||||
Sbjct: 4734 tggtagaaaagagcagcat 4716

>gb|AC110041.13| Mus musculus chromosome 8, clone RP23-276O15, complete sequence
          Length = 190535

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    acttcaattgctggtagaa 40
             |||||||||||||||||||
Sbjct: 17935 acttcaattgctggtagaa 17953

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 37      agaaaagagcagcattata 55
               |||||||||||||||||||
Sbjct: 1543129 agaaaagagcagcattata 1543147

>emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chromosome 11, complete
              sequence
          Length = 203030

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     agaaaagagcagcattata 55
              |||||||||||||||||||
Sbjct: 128022 agaaaagagcagcattata 128004


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,344,506
Number of Sequences: 3902068
Number of extensions: 1344506
Number of successful extensions: 101692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101554
Number of HSP's gapped (non-prelim): 138
length of query: 160
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 138
effective length of database: 17,147,199,772
effective search space: 2366313568536
effective search space used: 2366313568536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)