ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62k14 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 99.8 bits (247), Expect = 7e-21 Identities = 49/119 (41%), Positives = 64/119 (53%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 +VWG Y +ALTYFQL+ ED+ WWWRS L GSTG F+ Sbjct: 488 TVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIF 547 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 RS+MSG +QT FFGY Y FFLMLG + F ++L F+R+IY ++K + Sbjct: 548 LYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 99.8 bits (247), Expect = 7e-21 Identities = 49/119 (41%), Positives = 64/119 (53%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 +VWG Y +ALTYFQL+ ED+ WWWRS L GSTG F+ Sbjct: 488 TVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIF 547 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 RS+MSG +QT FFGY Y FFLMLG + F ++L F+R+IY ++K + Sbjct: 548 LYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 99.8 bits (247), Expect = 7e-21 Identities = 49/119 (41%), Positives = 64/119 (53%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 +VWG Y +ALTYFQL+ ED+ WWWRS L GSTG F+ Sbjct: 488 TVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIF 547 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 RS+MSG +QT FFGY Y FFLMLG + F ++L F+R+IY ++K + Sbjct: 548 LYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 99.8 bits (247), Expect = 7e-21 Identities = 49/119 (41%), Positives = 64/119 (53%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 +VWG Y +ALTYFQL+ ED+ WWWRS L GSTG F+ Sbjct: 471 TVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIF 530 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 RS+MSG +QT FFGY Y FFLMLG + F ++L F+R+IY ++K + Sbjct: 531 LYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 589
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 83.2 bits (204), Expect = 6e-16 Identities = 37/119 (31%), Positives = 60/119 (50%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 ++W ++ Y + + YFQL AED+ WWWR+FL G + F+V Sbjct: 507 AIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVL 566 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 + D+ F+ + +FGY A + +F+L+ G +GF AA FVR IY ++K + Sbjct: 567 VYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 77.8 bits (190), Expect = 3e-14 Identities = 40/119 (33%), Positives = 55/119 (46%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S W ++IY + TYF L AED+ W W SFL ST +V Sbjct: 471 SFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVY 530 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 + ++ M G QTSF+FGYMA A +M G +G+ FVR IY ++K + Sbjct: 531 MYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 77.8 bits (190), Expect = 3e-14 Identities = 40/119 (33%), Positives = 55/119 (46%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S W ++IY + TYF L AED+ W W SFL ST +V Sbjct: 469 SFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVY 528 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 + ++ M G QTSF+FGYMA A +M G +G+ FVR IY ++K + Sbjct: 529 MYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 74.3 bits (181), Expect = 3e-13 Identities = 36/119 (30%), Positives = 53/119 (44%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S+W H++Y + L YF L AED+ W WRSFL G T + Sbjct: 544 SIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFL 603 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 +++ ++G T +FGY + FFL G +GF A +FV IY +K + Sbjct: 604 IYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 74.3 bits (181), Expect = 3e-13 Identities = 36/119 (30%), Positives = 53/119 (44%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S+W H++Y + L YF L AED+ W WRSFL G T + Sbjct: 545 SIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFL 604 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 +++ ++G T +FGY + FFL G +GF A +FV IY +K + Sbjct: 605 VYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 74.3 bits (181), Expect = 3e-13 Identities = 36/119 (30%), Positives = 53/119 (44%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S+W H++Y + L YF L AED+ W WRSFL G T + Sbjct: 545 SIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFL 604 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 +++ ++G T +FGY + FFL G +GF A +FV IY +K + Sbjct: 605 IYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor| (p76) Length = 663 Score = 74.3 bits (181), Expect = 3e-13 Identities = 36/119 (30%), Positives = 53/119 (44%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S+W H++Y + L YF L AED+ W WRSFL G T + Sbjct: 545 SIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFL 604 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 +++ ++G T +FGY + FFL G +GF A +FV IY +K + Sbjct: 605 IYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 57.8 bits (138), Expect = 3e-08 Identities = 31/119 (26%), Positives = 53/119 (44%) Frame = -2 Query: 661 SVWGHRIYXXXXXXXXXXXXXXXXXXXXXVALTYFQLAAEDHEWWWRSFLCGGSTGFFVX 482 S+W ++I+ + +TY L E+ +W WR F+ GG+ G + Sbjct: 550 SLWFNKIFYMFGFLFFSFLLLTLTSSLVTILITYHSLCLENWKWQWRGFIIGGA-GCALY 608 Query: 481 XXXXXXXYARSDMSGFMQTSFFFGYMACICYAFFLMLGMVGFRAALFFVRHIYKSIKCE 305 + + + GF + GY + I L+ G +GF +++ FVR IY SIK + Sbjct: 609 VFIHSILFTKFKLGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667
>CAC1D_CHICK (O73700) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (CHCACHA1D) Length = 2190 Score = 31.2 bits (69), Expect = 2.9 Identities = 20/73 (27%), Positives = 30/73 (41%) Frame = +1 Query: 319 TCICAEQRTRRHGSPPYPASGRMHSRCTPCTQRRKMSA*SQTYPIVHSSSTDSSHRRKIQ 498 TC ++ RR PP PAS R S C +R+ P H + H + Q Sbjct: 1927 TCYDTKRSPRRRLLPPTPASNRRSSFNFECLRRQSSQDDIPLSPNFHHRTALPLHLMQQQ 1986 Query: 499 LILRTGMTSTTTH 537 ++ G+ S+ H Sbjct: 1987 VMAVAGLDSSKAH 1999
>PDR2_NICPL (Q2PCF1) Pleiotropic drug resistance protein 2 (NpPDR2)| Length = 1461 Score = 25.4 bits (54), Expect(2) = 7.5 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Frame = -2 Query: 445 MSGFMQTS---FFFGYMACICYAFFLMLGMV 362 M G+ T+ F+F Y +C+ +F M GM+ Sbjct: 1308 MIGYQWTAVKFFYFYYFIFMCFTYFSMYGMM 1338 Score = 22.7 bits (47), Expect(2) = 7.5 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -3 Query: 372 WVWWASVPPCSLFGTYTSR--SSVSKVLLEDEEQQAELYSFL 253 W +WAS +++G + S+ ++ L E ++ ++ FL Sbjct: 1379 WYYWASPVAWTIYGIFASQVGDRTDELELTGETEKIQVNEFL 1420
>NU4M_MARPO (P26848) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 495 Score = 29.6 bits (65), Expect = 8.4 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 163 GLISNMPISSSCFLLHARANLFYTGTS 243 GL+S MPI S+ FL AN+ GTS Sbjct: 369 GLVSTMPIFSTIFLFFTLANMSLPGTS 395 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,466,534 Number of Sequences: 219361 Number of extensions: 1782259 Number of successful extensions: 4346 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4345 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
