ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62k12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN615_HUMAN (Q8N8J6) Zinc finger protein 615 30 4.6

>ZN615_HUMAN (Q8N8J6) Zinc finger protein 615|
          Length = 555

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
 Frame = +3

Query: 15  KYNTSSIDSSTH*GSRPNKCISK*FYKCTIEYLCKCKCIE-------KGPNKCTIAHKES 173
           K +  +I   TH G +P  C      +C   ++ KC+ I        + P+ C++  K  
Sbjct: 95  KKSQLNIHQKTHMGGKPYTCS-----QCGKAFIKKCRLIYHQRTHTGEKPHGCSVCGKAF 149

Query: 174 STKFE*EAQVSSHT 215
           STKF       +HT
Sbjct: 150 STKFSLTTHQKTHT 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,991,194
Number of Sequences: 219361
Number of extensions: 1683554
Number of successful extensions: 4013
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4011
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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